Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq244 116 3e-21
seq87 89.7 5e-13
>seq244
Length=60485
Score = 116 bits (128), Expect = 3e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || | || | ||||| ||||| ||||||||||| ||| |
Sbjct 26186 CCACCGCGGAGACGGAGGACGAGGTGAAGAGTCGATTCCTTCTGAATGTTGTAGTCGGAC 26127
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| ||||||||||| ||| | || || ||||||||||| |||||
Sbjct 26126 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGA 26067
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||| | | || | || |||| |||||||
Sbjct 26066 ATACCCTCCTTGTCTTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACC 26007
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|| | ||| | ||| || ||||| || || || ||||
Sbjct 26006 TCAAGGGTGATGGTCTTTCCGGTAAGGGTCTTGACGA 25970
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| |||| ||| || || | || | ||| |||||| ||||||||||| |||
Sbjct 25896 GCCACCACGCAGACGGAGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGA 25837
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||||| |||||| || ||||| || ||| | || || ||||| ||||| |||||
Sbjct 25836 AAGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCGGGAGG 25777
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| ||| ||| ||||| | || | ||||| | ||| ||||
Sbjct 25776 AATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCCGAGGATTCGAC 25717
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || ||||| || ||||| ||||||||
Sbjct 25716 CTCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 25669
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| || || || || | || || ||||| || || ||||||||||||
Sbjct 26642 CCTCCACGGAGACGGAGAACCAAGTGGAGCGTGGATTCCTTCTGGATATTGTAATCGCTC 26583
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || |||||||| || ||| |||| | ||| ||||| ||||||||
Sbjct 26582 AAGGTGCGACCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGGA 26523
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || || ||| | | || | || |||| || || |
Sbjct 26522 ATGCCTTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACT 26463
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||||| || || || || | || || || |||||||||||
Sbjct 26462 TCTAGGGTAATAGTCTTTCCCGTCAATGTCTTGACAAAAATCTGCAT 26416
>seq87
Length=177310
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | ||| | ||| |||||| || |||||||| |||
Sbjct 65651 CCACCACGGAGGCGGAGGACGAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 65592
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||| || || |||||||| ||| |||| | ||||||||||| || ||
Sbjct 65591 AGAGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCGGGGGGA 65532
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || ||| | ||||| |
Sbjct 65531 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTAGACTCCACC 65472
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| | ||| | || || || || || || || ||||| ||||||||||
Sbjct 65471 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 65423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472009820419200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |