Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq244 172 1e-37 seq87 167 4e-36 seq5 154 3e-32 seq19 141 2e-28 >seq244 Length=60485 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 |||||| || || || | |||||||| |||||||| || || ||||| || |||||| Sbjct 26643 TCCTCCACGGAGACGGAGAACCAAGTGGAGCGTGGATTCCTTCTGGATATTGTAATCGCT 26584 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 | || | |||||||| | |||||| || ||||| ||||| | ||| || || || || Sbjct 26583 CAAGGTGCGACCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGG 26524 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 ||||||||||||||| |||||||| ||| ||| ||||||||||| | ||||| || Sbjct 26523 AATGCCTTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAAC 26464 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| | ||| || || |||||||| | |||||||| || |||||||| Sbjct 26463 TTCTAGGGTAATAGTCTTTCCCGTCAATGTCTTGACAAAAATCTGCAT 26416 Score = 145 bits (160), Expect = 1e-29 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | ||| || || || || || || ||||| || ||||| Sbjct 26186 CCACCGCGGAGACGGAGGACGAGGTGAAGAGTCGATTCCTTCTGAATGTTGTAGTCGGAC 26127 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || | || || ||||| || ||| Sbjct 26126 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGA 26067 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | ||| || ||||||||||| | || || || Sbjct 26066 ATACCCTCCTTGTCTTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACC 26007 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454 || | ||||||||| ||||| || ||||||||||||| || Sbjct 26006 TCAAGGGTGATGGTCTTTCCGGTAAGGGTCTTGACGACTA 25967 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||| ||| || || ||||| || ||||| Sbjct 25895 CCACCACGCAGACGGAGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAA 25836 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| || ||||| || | || ||||||||||| ||| Sbjct 25835 AGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCGGGAGGA 25776 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||||||| |||||||| || | ||||| || Sbjct 25775 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCCGAGGATTCGACC 25716 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || ||||| ||||||||||| |||||||| Sbjct 25715 TCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 25669 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | | || | ||| || || ||||| || || ||||| || ||| Sbjct 26414 CCACCACGAAGTCTGAGAACAAGGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCGCTC 26355 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| || || || || |||| |||||||||||| || Sbjct 26354 AGCGTTCGGCCATCCTCCAACTGCTTACCCGCAAAGATAAGTCGTTGTTGGTCGGGCGGG 26295 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | |||||| ||||| ||||| | || || || Sbjct 26294 ATTCCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATTGTGTCCGAAGACTCCACC 26235 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || ||||||||||| ||||| || ||||| Sbjct 26234 TCAAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 26188 >seq87 Length=177310 Score = 167 bits (184), Expect = 4e-36 Identities = 177/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | || || ||| ||| || |||||||| || |||||| Sbjct 65651 CCACCACGGAGGCGGAGGACGAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 65592 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | ||||| |||||||| || |||| || |||||||| ||| Sbjct 65591 AGAGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCGGGGGGA 65532 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| | |||||| ||||||||||| ||| || || || Sbjct 65531 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTC-GCTAGACTCCAC 65473 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | |||||| || || |||||||||||||||||||| |||||||| || Sbjct 65472 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 65422 >seq5 Length=467666 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||||||||| |||||||| || ||||| Sbjct 48692 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAA 48633 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || || | ||||||||||| ||| Sbjct 48632 AGAGTTCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGA 48573 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | |||||| ||||||||||| | || || || Sbjct 48572 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 48513 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || | |||||| || || ||||| |||||||| ||||| Sbjct 48512 TCGAGGGTGATAGTCTTACCCGTAAGGGTCTTCACGAA 48475 >seq19 Length=350955 Score = 141 bits (156), Expect = 2e-28 Identities = 558/867 (64%), Gaps = 27/867 (3%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 190161 CATGACACCGGCCTTCTGGTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACC 190102 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| |||||||| || || || ||| || || Sbjct 190101 CAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGAGCGGTACACCTTCTCGTTGCC 190042 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | |||||| || ||||||||||||||||| |||| |||| | ||| Sbjct 190041 GAGGGCCACCAGCAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTT 189982 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | | ||||| | || || | ||| |||| || ||| ||| || Sbjct 189981 CATGCCTAGTAGGGCACAGGGCAGAGCCTCCGTCAGGAACTCCTGCTCAATGGTGACGGC 189922 Query 10175 TTCCTCGACGATGCTCTTTACCACGTC----AAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 || || ||| ||| |||||||| ||| | | ||||| ||| | || Sbjct 189921 ATCGGTGATGATCTTCTCGACCACGTCCTTGCCGGGGC-GGTTGTT---GAGGTGGGAGA 189866 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 |||| || | || | ||| || ||||| || || ||||| |||||||| | Sbjct 189865 ACAGCAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAGA 189806 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 | ||||||||||||||| || || || |||||||| |||| ||| | || Sbjct 189805 AGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCAC 189746 Query 10351 AGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAG------C 10404 ||| | | |||||| || | |||| | || || | ||||||| | Sbjct 189745 TGAAGAAGATACCCTCAACAGCGGCGAAGGCAATAAGACGTTGGGCGAAGGTGGACTTCT 189686 Query 10405 GGTCGCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCT 10464 |||| | || | | | |||||| | |||||||| | | | ||| || |||| Sbjct 189685 TGTCG---GCAATCCAGTGCAGGGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCT 189629 Query 10465 CGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCA 10524 | || || | |||||| | | || || |||| || | |||| ||| | Sbjct 189628 CAATGGCATTGAAGAGATGTGTCTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGA 189569 Query 10525 GGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATACGT 10583 ||||||| |||| ||||| | |||| | |||| | ||||||| ||| || Sbjct 189568 GGGAGTAAGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAT-CGG 189510 Query 10584 GCCGAGGGGTCCGTGACTTCCTCGGCAAAG--TTG-TTGTTCAGGTTCTCCATCACCATG 10640 ||| ||| | || ||||| || || | | | | |||||||| | || ||| Sbjct 189509 GCCTCTGGGATCTGGA---CCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATG 189453 Query 10641 CCATC-GCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTT 10699 || || | || | || |||||| |||||||||| ||||||| ||| |||||||| Sbjct 189452 CCGTCAGATG-CGGCGAAGAAGGCGAGGATGTGGGAGATGAAGAATTTCTCGTCATCGTT 189394 Query 10700 CAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAA 10759 || | | |||||| | ||||| | || | | |||||| |||||||||| Sbjct 189393 TAGGCGGTTGCTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCGGTCCAGAA 189334 Query 10760 AGTGGCAACGGCCTTCTTGTACATCTG 10786 | || || ||||||||||||||| Sbjct 189333 GGAAGCTTCGTGCTTCTTGTACATCTG 189307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921616582258600