Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq244 172 1e-37
seq87 167 4e-36
seq5 154 3e-32
seq19 141 2e-28
>seq244
Length=60485
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
|||||| || || || | |||||||| |||||||| || || ||||| || ||||||
Sbjct 26643 TCCTCCACGGAGACGGAGAACCAAGTGGAGCGTGGATTCCTTCTGGATATTGTAATCGCT 26584
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
| || | |||||||| | |||||| || ||||| ||||| | ||| || || || ||
Sbjct 26583 CAAGGTGCGACCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGG 26524
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
||||||||||||||| |||||||| ||| ||| ||||||||||| | ||||| ||
Sbjct 26523 AATGCCTTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAAC 26464
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| | ||| || || |||||||| | |||||||| || ||||||||
Sbjct 26463 TTCTAGGGTAATAGTCTTTCCCGTCAATGTCTTGACAAAAATCTGCAT 26416
Score = 145 bits (160), Expect = 1e-29
Identities = 164/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | || | ||| || || || || || || ||||| || |||||
Sbjct 26186 CCACCGCGGAGACGGAGGACGAGGTGAAGAGTCGATTCCTTCTGAATGTTGTAGTCGGAC 26127
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || | || || ||||| || |||
Sbjct 26126 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGA 26067
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| ||||| | ||| || ||||||||||| | || || ||
Sbjct 26066 ATACCCTCCTTGTCTTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCGACC 26007
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454
|| | ||||||||| ||||| || ||||||||||||| ||
Sbjct 26006 TCAAGGGTGATGGTCTTTCCGGTAAGGGTCTTGACGACTA 25967
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || ||| ||| || || ||||| || |||||
Sbjct 25895 CCACCACGCAGACGGAGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAA 25836
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | ||||| || ||||| || | || ||||||||||| |||
Sbjct 25835 AGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCGGGAGGA 25776
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||||||| |||||||| || | ||||| ||
Sbjct 25775 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCCGAGGATTCGACC 25716
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || ||||| ||||||||||| ||||||||
Sbjct 25715 TCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 25669
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| | | || | ||| || || ||||| || || ||||| || |||
Sbjct 26414 CCACCACGAAGTCTGAGAACAAGGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCGCTC 26355
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || |||||||| || || || || |||| |||||||||||| ||
Sbjct 26354 AGCGTTCGGCCATCCTCCAACTGCTTACCCGCAAAGATAAGTCGTTGTTGGTCGGGCGGG 26295
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | |||||| ||||| ||||| | || || ||
Sbjct 26294 ATTCCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATTGTGTCCGAAGACTCCACC 26235
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || || || ||||||||||| ||||| || |||||
Sbjct 26234 TCAAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 26188
>seq87
Length=177310
Score = 167 bits (184), Expect = 4e-36
Identities = 177/231 (77%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | || || ||| ||| || |||||||| || ||||||
Sbjct 65651 CCACCACGGAGGCGGAGGACGAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 65592
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | ||||| |||||||| || |||| || |||||||| |||
Sbjct 65591 AGAGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCGGGGGGA 65532
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|| || |||||||| || ||||| | |||||| ||||||||||| ||| || || ||
Sbjct 65531 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTC-GCTAGACTCCAC 65473
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464
|| | |||||| || || |||||||||||||||||||| |||||||| ||
Sbjct 65472 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 65422
>seq5
Length=467666
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || ||||||||||| |||||||| || |||||
Sbjct 48692 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAA 48633
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | ||||| |||||||| || || | ||||||||||| |||
Sbjct 48632 AGAGTTCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGA 48573
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | |||||| ||||||||||| | || || ||
Sbjct 48572 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 48513
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| | |||||| || || ||||| |||||||| |||||
Sbjct 48512 TCGAGGGTGATAGTCTTACCCGTAAGGGTCTTCACGAA 48475
>seq19
Length=350955
Score = 141 bits (156), Expect = 2e-28
Identities = 558/867 (64%), Gaps = 27/867 (3%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 190161 CATGACACCGGCCTTCTGGTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACC 190102
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
||||| ||| |||||||||||| |||||||| || || || ||| || ||
Sbjct 190101 CAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGAGCGGTACACCTTCTCGTTGCC 190042
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | |||||| || ||||||||||||||||| |||| |||| | |||
Sbjct 190041 GAGGGCCACCAGCAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTT 189982
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||| | | | ||||| | || || | ||| |||| || ||| ||| ||
Sbjct 189981 CATGCCTAGTAGGGCACAGGGCAGAGCCTCCGTCAGGAACTCCTGCTCAATGGTGACGGC 189922
Query 10175 TTCCTCGACGATGCTCTTTACCACGTC----AAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230
|| || ||| ||| |||||||| ||| | | ||||| ||| | ||
Sbjct 189921 ATCGGTGATGATCTTCTCGACCACGTCCTTGCCGGGGC-GGTTGTT---GAGGTGGGAGA 189866
Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290
|||| || | || | ||| || ||||| || || ||||| |||||||| |
Sbjct 189865 ACAGCAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAGA 189806
Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350
| ||||||||||||||| || || || |||||||| |||| ||| | ||
Sbjct 189805 AGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCAC 189746
Query 10351 AGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAG------C 10404
||| | | |||||| || | |||| | || || | ||||||| |
Sbjct 189745 TGAAGAAGATACCCTCAACAGCGGCGAAGGCAATAAGACGTTGGGCGAAGGTGGACTTCT 189686
Query 10405 GGTCGCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCT 10464
|||| | || | | | |||||| | |||||||| | | | ||| || ||||
Sbjct 189685 TGTCG---GCAATCCAGTGCAGGGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCT 189629
Query 10465 CGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCA 10524
| || || | |||||| | | || || |||| || | |||| ||| |
Sbjct 189628 CAATGGCATTGAAGAGATGTGTCTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGA 189569
Query 10525 GGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATACGT 10583
||||||| |||| ||||| | |||| | |||| | ||||||| ||| ||
Sbjct 189568 GGGAGTAAGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAT-CGG 189510
Query 10584 GCCGAGGGGTCCGTGACTTCCTCGGCAAAG--TTG-TTGTTCAGGTTCTCCATCACCATG 10640
||| ||| | || ||||| || || | | | | |||||||| | || |||
Sbjct 189509 GCCTCTGGGATCTGGA---CCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATG 189453
Query 10641 CCATC-GCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTT 10699
|| || | || | || |||||| |||||||||| ||||||| ||| ||||||||
Sbjct 189452 CCGTCAGATG-CGGCGAAGAAGGCGAGGATGTGGGAGATGAAGAATTTCTCGTCATCGTT 189394
Query 10700 CAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAA 10759
|| | | |||||| | ||||| | || | | |||||| ||||||||||
Sbjct 189393 TAGGCGGTTGCTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCGGTCCAGAA 189334
Query 10760 AGTGGCAACGGCCTTCTTGTACATCTG 10786
| || || |||||||||||||||
Sbjct 189333 GGAAGCTTCGTGCTTCTTGTACATCTG 189307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921616582258600
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