Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq19 399 4e-106 seq122 242 7e-59 >seq19 Length=350955 Score = 399 bits (442), Expect = 4e-106 Identities = 621/866 (72%), Gaps = 40/866 (5%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGG-CGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCT 42358 |||||| |||||||||||| || || | ||| ||||||||||||||||||||| || Sbjct 189301 ATCTGGCAGATGTACAAGAAGCACGAAGCT-TCCTTCTGGACCGCCGAGGAGATTGATCT 189359 Query 42359 GGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCA 42414 ||||||| || |||| || || | || | || |||| || || ||| || Sbjct 189360 ATCCAAGGATCTCCACGACTGG-AGCAACCGCCTAAACGATGACGAGAAATTCTTCATCT 189418 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 |||| || |||||||||||||| ||||||||||| ||||| |||||||| | | Sbjct 189419 CCCACATCCTCGCCTTCTTCGCCGCATCTGACGGCATTGTCAACGAGAACCTTGTCGAGC 189478 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 | ||| ||||| ||| | ||||| || |||||||||||||||||||| | Sbjct 189479 GATTCTCTGGCGAGGTCCAGATCCCAGAGGCCCGATGCTTCTACGGCTTCCAGATCATGA 189538 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591 | |||||| | ||||| ||| ||| || || |||| |||| |||||| ||| | Sbjct 189539 TGGAGAACATCCACTCCGAGACTTACTCC---CTCCTCATTGACACCTACATCAAGGAGC 189595 Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651 | | | || | || ||||| ||||| ||||| || || |||||| ||||||| Sbjct 189596 CTGCCCAGAAGACACATCTCTTCAATGCCATTGAGACCATTCCTTGCATCCGCAAGAAGG 189655 Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTA 42710 | |||||||| || ||||||| | | | || | | || |||| | | | || | Sbjct 189656 CCGACTGGGCCCTGCACTGGATTGCC-GACAAGAAGTCCACCTTCGCCCAACGTCTTATT 189714 Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 ||||| |||| || ||||| ||||||||| || |||||||| ||||||||||||||| Sbjct 189715 GCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGAGCCTTCGCTTCCATCTTCTGGCTC 189774 Query 42771 AAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829 ||| || ||| || |||||||| || |||||||| |||||||||||| | || || Sbjct 189775 AAGAAGCGTGGTCTC-ATGCCCGGTCTGACCTTCTCCAACGAACTCATCTCGCGTGATGA 189833 Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC-CCT 42888 ||| ||||| | ||||| |||||||| |||||||| |||||||| |||| | || Sbjct 189834 GGGTCTGCACACCGACTTCGCCTGCCTGCTGTTCTC---CCACCTCA---ACAACCGCCC 189887 Query 42889 CG--AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCT 42946 || ||||| |||| | |||||||| || ||||| || ||| |||||||||| Sbjct 189888 CGGCAAGGACGTGGTCGAGAAGATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCT 189947 Query 42947 CACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACA 43005 ||| || | |||||| ||| |||| | ||||||||| | |||||||| |||||| Sbjct 189948 GACGGAGGCTCTGCCCTGTG-CCCTACTAGGCATGAACGCCAACCTCATGAAGCAGTACA 190006 Query 43006 TCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACA 43059 || ||| |||||||||| | |||| | | ||| ||| || || | ||| Sbjct 190007 TCGAGTTCGTCGCCGAC---CGCCTG---CTGGTGGCCCTCGGCAACGAGAAGGTGTACC 190060 Query 43060 ACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTT 43119 | | | |||||||||||| |||||||||||||| ||| |||||||||||||| | Sbjct 190061 GCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCT 190120 Query 43120 TCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||||| | || |||||| Sbjct 190121 TCGAGAAGCGCGTTGGTGATTACCAG 190146 >seq122 Length=136518 Score = 242 bits (268), Expect = 7e-59 Identities = 873/1358 (64%), Gaps = 37/1358 (3%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | || || ||||| ||||| |||| || || Sbjct 47161 GTTAACGACCTGGAACTCGCCAGCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGG 47220 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| |||| |||| ||||| | ||||| || || |||||||| | || Sbjct 47221 CTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGAC 47280 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 || || ||||| | ||| || | || ||| | |||| | |||||||||| Sbjct 47281 CAACAAGCTGTTGCGCACACCATTTTGCTTGATTTGCTCCTTGAGGCTGGTCCAGTCCCA 47340 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 | |||| || ||| ||||||||| | || || | |||| Sbjct 47341 AAGATCCGATGGGG---------TGACATTCCACATGTCGTATTGAAGGATGCCCTGCGA 47391 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC 244389 |||||| ||||||||||| | ||| || || ||| || ||| | || | | | Sbjct 47392 GACGGGAGAACCCTCGTAGGTAGAGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGACGC 47451 Query 244390 -GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448 ||| ||| |||| | |||||| |||||||||||| |||||| | | | || || Sbjct 47452 AGTCAAGG-CGGCATGGTAGATCGTCTCGAAGATCTGCTTGTTTAATT-----GTCTAGC 47505 Query 244449 CGCAGGTGA-----AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCC 244503 | | ||||| | || || | || || ||| || || || ||||| || || Sbjct 47506 CTCTGGTGACTCAAAAGGCATACGCAATGCCAAGAATGTATCAGCAAGACCCTGAACACC 47565 Query 244504 GATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTT 244563 | || ||||| | ||||||| ||||| | ||| || || ||||||||| | || Sbjct 47566 AAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGGGCCTCTGGGACGGGGTAATAATT 47625 Query 244564 GCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTG 244623 | | || || | |||| | ||| | || | || || || || | ||| Sbjct 47626 GACATCAATAATTCTGTTCAAATTGTGAACGACGACTTGGGTAACCTCATGCAACTTCTG 47685 Query 244624 AAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683 ||||| || || | ||| | || || | ||||| | |||| Sbjct 47686 GAAGTCATA-----AGTG--CCTTCGTTATAGTCA-----ACAAAGGACGGCAACGCGAG 47733 Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743 | || | ||||||||| |||||||| || | | || ||||| | ||||||||||| Sbjct 47734 GGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCAATGATCTCGGTGCA 47793 Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803 || || || || || || || | || || || |||| ||||||| || Sbjct 47794 AAGATTCGAGCTGCGAATAGTACCAAGATTCTTCTGGTTACTCTTGCGGTTGCAGTGATC 47853 Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863 |||||| ||||||||||| || ||||| ||| || |||| | | || ||| || Sbjct 47854 CTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACAG 47913 Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGG 244922 | | |||||| | | || ||| ||| | |||||||| ||||| |||||||| Sbjct 47914 CTTCTGAGCCTTAATCTTCTGGCG-GCCGCGACCCTCTGCTTCGTACTTCTCGTACAGGG 47972 Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGAC 244982 |||||||||| ||| | || || |||| || |||||| || |||||||| Sbjct 47973 CCTCGAACTCATCGCCATAAACGTCAGCTAGACCAGGGCACTCGTTAGGACACATGAGGG 48032 Query 244983 TCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGA 245042 ||||||| || | || || | | ||||||||| || || |||||||| ||| ||| Sbjct 48033 TCCACTCTCCATTCTTCTCAACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCCAGGA 48092 Query 245043 AGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAA 245102 |||| || | || | || ||| |||| |||||| | || || | || || | Sbjct 48093 AGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTCGA 48152 Query 245103 AGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTC 245162 | || || |||||| ||||| | ||||| |||| || || || | ||||||||| | Sbjct 48153 AAACATCCGAGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCAGGTCTCTTGTTGCCAC 48212 Query 245163 CCTGGTCCAC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221 |||| || || ||| | | | ||||||| || || | || || |||||||| Sbjct 48213 CCTGATCTACGTATCTTGCAGTG-TTATTGAAGACACGTAGCATGGGTACAATGCCGTTC 48271 Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281 ||| |||||| ||||| ||||| | ||| | | | || | | |||| | Sbjct 48272 GAGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCGGTGGATGTTGAGA 48331 Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341 || | || ||||| ||||||||| | ||| || |||||| |||||| || ||| Sbjct 48332 CCAATACCACCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCC 48391 Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401 || ||||| || |||||||| || || ||||| || || ||||||| || ||| | Sbjct 48392 TCAATGCTATCGTCCTTCATGTCGACGAGGAAGCAAGACGAGAGCTGGGCCTGGGGTGTC 48451 Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 | | ||||| ||||| ||| || || || ||||| Sbjct 48452 CCAGCATTGAAGAGAGTTGGGGAAGCATGAGTGAAGTA 48489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333238858800