Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq19 109 1e-18 >seq19 Length=350955 Score = 109 bits (120), Expect = 1e-18 Identities = 138/187 (74%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 ||||||||| | | |||||| ||||||||||| ||||| ||||||||| | | | Sbjct 189976 GGCATGAACGCCAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTGCTGGTG 190035 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || || || | ||||| |||||| ||||| |||||||| | ||| |||||| ||| Sbjct 190036 GCCCTCGGCAACGAGAAGGTGTACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATC 190095 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGG 243746 || || || || || ||||||||||| ||||| || ||||||| || | | || || Sbjct 190096 TCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGATTACCAGAAGGCC-GG 190154 Query 243747 TGTGATG 243753 ||| ||| Sbjct 190155 TGTCATG 190161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102872864021750