Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq122 199 5e-46
seq19 141 1e-28
>seq122
Length=136518
Score = 199 bits (220), Expect = 5e-46
Identities = 845/1312 (64%), Gaps = 31/1312 (2%)
Strand=Plus/Plus
Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTC 113973
||||| || |||||| || | ||| ||||| |||| ||||| ||||| ||||||||
Sbjct 47174 AACTCGCCAGCGAGGACACGGCG-AGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTC 47232
Query 113974 ATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033
||||||||||||||| |||| ||| ||| ||||||||||| || | | | ||||||
Sbjct 47233 ATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGACCAACAAGCTGTT 47292
Query 114034 ACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT 114093
|| | ||| |||| | | || | ||||||||| | |||||| | | ||
Sbjct 47293 GCGCACACCATTTTGCTTGATTTGCTCCTTGAGGCTGGTCCAGTCCCAAAGATCCGATGG 47352
Query 114094 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGT 114153
| | |||||| || | || ||||| || || ||| | || || ||||| | ||
Sbjct 47353 GGTGACATTCCACATGTCGTATTGAAGGATGCCCTGCGAGACGGGAGAACCCTCGTAGGT 47412
Query 114154 CTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 114213
||| ||||| || |||| || | || | | ||| | ||| || || || ||
Sbjct 47413 AGAGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGACGCAGTCAAGGCGGCATGGTAGAT 47472
Query 114214 TGTCTCAAAAA--TGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGG 114271
||||| || | ||| | || |||| | | ||||| || ||||| | | ||
Sbjct 47473 CGTCTCGAAGATCTGCTTG-TTTAATTGTC-TAGCCTCTGGTGACTCAAAAGGCATACGC 47530
Query 114272 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 114331
| | ||| ||| || ||||| || ||||| || ||||| || || |||| |||
Sbjct 47531 AATGCCAAGAATGTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCATG 47590
Query 114332 TTAGACTTTCGAGCGGTCT-CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 114390
|| || || || ||| ||||| ||| |||| ||| |||| || || | |||
Sbjct 47591 TTGCTGTTACGGGC-CTCTGGGACGGGGTAATAATTGACATCAATAATTCTGTTCAAATT 47649
Query 114391 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 114450
| ||| || | || | ||||| | ||| | | | ||| || ||| || |
Sbjct 47650 GTGAACGACGACTTGGGTAACCTCATGCAACTTCTGGAAGTCATAAGTGC---CTTCGTT 47706
Query 114451 ATTGACATACTTAGGAAGG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 114506
|| | || || |||| || |||| || || | || || |||| ||||||
Sbjct 47707 ATAGTCA-ACAAAGGACGGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAG 47765
Query 114507 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 114566
| | |||||| || || || || || | ||| || || ||| || || | ||||
Sbjct 47766 GGGCGGAGTACTCAATGATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCT 47825
Query 114567 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCG 114626
| || || ||| ||| || |||||||||||||||| | || | || ||||| |
Sbjct 47826 TCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAG 47885
Query 114627 TTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCAC-AGTGGCGTTGGCTCG 114684
| || | || |||||| || | ||| | | || | | || | ||||| | | ||
Sbjct 47886 TCTGAGCCTCGAGAATGGCGTACCACAGCTTCTGAGCCTTAATCTTCTGGCG--GCCGCG 47943
Query 114685 CCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAG 114744
||||| | |||||||| ||| ||||| || ||||| || || | || | ||
Sbjct 47944 ACCCTCTGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAG 48003
Query 114745 CCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCAT 114804
|| || || | || || | ||| | ||| | ||| || ||||||||| |||||
Sbjct 48004 ACCAGGGCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTCAT 48063
Query 114805 GAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC 114864
|||||| || || ||||||||||| ||||||||| || ||| |||| || | ||
Sbjct 48064 GAAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCC 48123
Query 114865 CTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC 114924
|| || || | || | || || | | ||||| |||||| || || ||||| |
Sbjct 48124 ATGGTTCTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAGAT 48183
Query 114925 CGCGATTG-ACC---CCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAA 114980
|||| | ||| || | | ||| |||| | ||| || || || ||| ||| |
Sbjct 48184 GGCGAAAGCACCAGGTCTCTTGTTG-CCACCCTGATCTACGTATCTTGCAGTGTTATTGA 48242
Query 114981 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGA 115038
| || || ||||| || | || || | || ||| || || || || || |||
Sbjct 48243 AGACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGC 48302
Query 115039 CTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 115098
| | | || | || ||||||| | ||||||||| || ||| ||| |||||
Sbjct 48303 C--AGTAGCACGGATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCAT 48360
Query 115099 CGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAG 115158
|| || | |||| || ||||||| || || || || |||| | ||| ||
Sbjct 48361 GGCACAAGTCTTGAGGGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACGAG 48420
Query 115159 GAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGG 115209
|||||| ||| | || ||||| ||||| ||||| |||||||| |||||
Sbjct 48421 GAAGCAAGACGAGAGCTG-GGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGG 48471
>seq19
Length=350955
Score = 141 bits (156), Expect = 1e-28
Identities = 348/517 (67%), Gaps = 23/517 (4%)
Strand=Plus/Minus
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
||| |||||||| ||||| ||||||||||| || |||||| ||| || |||||||||||
Sbjct 189843 GTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCAGACCGGGCATGAGACC 189784
Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177
|||||||| | |||||| || | | || | || ||||||||| ||||| |||
Sbjct 189783 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCACTGAAGAAGATACCCTCAACAGC 189724
Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCAAACCACTTCAT 126234
||||| |||| ||||| | || |||| | |||| |||| | ||| ||| | ||
Sbjct 189723 GGCGAAGGCAATAAGACGTTGGGCGAAGGTG---GACTTCTTGTCGGCAATCCAGTGCAG 189667
Query 126235 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 126294
||||| | ||||| || ||| || || | ||||| || || | ||||| | |
Sbjct 189666 GGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCTCAATGGCATTGAAGAGATGTGT 189607
Query 126295 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGAC 126354
||| | | || || |||||||| | || ||||| || || || ||| |||||
Sbjct 189606 CTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAAGTCTCGGAGTGGAT 189547
Query 126355 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 126413
| | ||| || | ||| | ||||||| | || || || ||||| |||||
Sbjct 189546 GTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCTGGGATCTGGACCTCGC 189488
Query 126414 CGGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 126470
| | | ||| | | || | ||||| ||||| || || || | || || || |
Sbjct 189487 CAG-AGAATCG--CTCGACAAGGTTCTCGTTGACAATGCCGTCAGATGCGGCGAAGAAGG 189431
Query 126471 CCAGGATAT---ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGT 126524
| ||||| | | | | |||||||| ||| ||||| | || | |||||||||
Sbjct 189430 CGAGGATGTGGGAGATGAAGAATTTCTCGTCA---TCGTTTAGGCGGTTGCTCCAGTCGT 189374
Query 126525 CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|||||||| || ||||| | |||||| || |||||
Sbjct 189373 GGAGATCCTTGGATAGATCAATCTCCTCGGCGGTCCA 189337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597349829205400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |