Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq87 125 8e-24
seq244 113 5e-20
>seq87
Length=177310
Score = 125 bits (138), Expect = 8e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071
||||||||||| || || ||||| || | ||||| || |||| || || ||||| ||
Sbjct 65621 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCGAGTTGCTTGCCG 65562
Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131
||||| || |||||||||||||||| || | | |||||||||| ||| || |||
Sbjct 65561 GCGAAGATCAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTG 65502
Query 42132 AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 42191
| | | | |||||||| || ||||| || | ||||| || |||||||| || |||
Sbjct 65501 ACATTGTCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 65442
Query 42192 TTTACAAAGATTTGCAT 42208
|| || ||||| |||||
Sbjct 65441 TTGACGAAGATCTGCAT 65425
>seq244
Length=60485
Score = 113 bits (124), Expect = 5e-20
Identities = 147/201 (73%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071
||||||||||| ||||| ||||| || | ||||| || |||| || || ||||| |||
Sbjct 25865 GTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGAGTTGCTTTCCA 25806
Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131
||||| || | |||||| ||||||| || | | |||||||||| ||| || |||
Sbjct 25805 GCGAAAATCAATCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 25746
Query 42132 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190
| ||| | | | || || ||||| || || | |||||||| ||||| || || ||
Sbjct 25745 A-CGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGAGT 25687
Query 42191 CTTTACAAAGATTTGCATTTT 42211
||| || ||||| ||||| ||
Sbjct 25686 CTTGACGAAGATCTGCATCTT 25666
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||| ||||| || ||| || || | || || | ||||||||| || ||
Sbjct 26379 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTTCGGCCATCCTCCAACTGCTTACCCGCAAA 26320
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| ||||| || ||||||| || | | |||||||||| ||| || ||||| |||
Sbjct 26319 GATAAGTCGTTGTTGGTCGGGCGGGATTCCCTCCTTGTCCTGGATCTTGGATTTGA-CGT 26261
Query 42137 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | ||||| || ||||| || | ||||| || ||||| || || ||||| |
Sbjct 26260 TGTCGATTGTGTCCGAAGACTCCACCTCAAGAGTGATCGTCTTGCCGGTGAGGGTCTTCA 26201
Query 42196 CAAAGATTTGCAT 42208
| |||||||||||
Sbjct 26200 CGAAGATTTGCAT 26188
Score = 89.7 bits (98), Expect = 6e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| | | ||| | ||||| || | ||| ||||| || ||||||||||| |
Sbjct 26642 CCTCCACGGAGACGGAGAACCAAGTGGAGCGTGGATTCCTTCTGGATATTGTAATCGCTC 26583
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
| || || | || || ||||||||||||||||| ||||| || ||||| || | ||
Sbjct 26582 AAGGTGCGACCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGGA 26523
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 42160
| || ||||||||| ||| | || | | ||| | | | |||||| ||||| ||
Sbjct 26522 ATGCCTTCCTTGTCC-TGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAAC 26464
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | || || || || ||||| | ||||| ||||| || |||||
Sbjct 26463 TTCTAGGGTAATAGTCTTTCCCGTCAATGTCTTGACAAAAATCTGCAT 26416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543209370969200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |