Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq122 185 9e-42
>seq122
Length=136518
Score = 185 bits (204), Expect = 9e-42
Identities = 491/738 (67%), Gaps = 14/738 (2%)
Strand=Plus/Minus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-G 93954
|||| || || ||||| || ||||| || | | ||| | || || || ||||| | |
Sbjct 48473 CCCCAACTCTCTTCAATGCTGGGACACCCCAGGCCCAGCTCTCGTCTTGCTTCCTCGTCG 48414
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
|| | |||| ||| ||| || || | ||||| ||||||| ||||| | |||
Sbjct 48413 AC-ATGAAGGACGATAGCATTGAGGGTATCTACGACACCCTCAAGACTTGTGCCATGATC 48355
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074
|| || || || || || || ||| ||||| | | ||||| | || || |||
Sbjct 48354 TCCAAGATGGCCGGTGGTATTGGTCTCAACATCCACCGCATCCGTGCTACTGGCTCATAC 48295
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
|| || || || |||||||| |||||| | || || ||||| || |||||||| |||
Sbjct 48294 ATTGCTGGCACTAACGGCACCTCGAACGGCATTGTACCCATGCTACGTGTCTTCAATAAC 48235
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| || | ||||| || |||||||| | ||| ||| ||||||| |||| |||
Sbjct 48234 ACTGCAAGATACGTAGATCAGGGTGGCAACAAGAGACCTGGTGCTTTCGCCATCTACCTC 48175
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
||||| |||||| |||| || | ||| | || || ||||||||||| ||||| ||
Sbjct 48174 GAGCCTTGGCACTCGGATGTTTTCGAGTTCCTTGATCTTCGAAAGAACCATGGCAAGGAG 48115
Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
| | ||| | || |||||| ||||||||| | || || || || ||||||||
Sbjct 48114 GAAGTTCGTGCCCGCGATCTCTTCCTGGCTCTCTGGATTCCTGATCTCTTCATGAAACGT 48055
Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374
|| ||||| || | |||| || | ||||| || || || || || || | |||
Sbjct 48054 GTTGAGAAGAATGGAGAGTGGACCCTCATGTGTCCTAACGAGTGCCCTGGTCTAGCTGAC 47995
Query 94375 GTTTGTGG--ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCC 94431
|||| ||| || | ||| || | | |||| | |||||| | |||| | ||||
Sbjct 47994 GTTTATGGCGAT-GAGTTC-GAGGCCCTGTACGAGAAGTACGAAGCAGAGGGTCGCGGCC 47937
Query 94432 AG--GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489
|||| ||| || || |||||||||| | || | || | ||| ||||
Sbjct 47936 GCCAGAAGATTAAGG---CTCAGAAGCTGTGGTACGCCATTCTCGAGGCTCAGACTGAGA 47880
Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548
| || | |||| ||| | | |||||| | ||| |||| |||| |||||| || |
Sbjct 47879 CTGGAAATCCCTTCATGCTTTACAAGGATCACTG-CAACCGCAAGAGTAACCAGAAGAAT 47821
Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608
|| || || ||||||||||| ||||||||||| | ||||| | | || ||
Sbjct 47820 CTTGGTACTATTCGCAGCTCGAATCTTTGCACCGAGATCATTGAGTACTCCGCCCCTGAT 47761
Query 94609 GAGATTGCTGTGTGTAAC 94626
||| | ||||| || |||
Sbjct 47760 GAGGTGGCTGTCTGCAAC 47743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494720077059800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |