Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq122 185 1e-41
seq19 156 5e-33
>seq122
Length=136518
Score = 185 bits (204), Expect = 1e-41
Identities = 842/1312 (64%), Gaps = 31/1312 (2%)
Strand=Plus/Plus
Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934
||||| || |||||| || | ||| |||||||||| ||||| ||||| ||||||||
Sbjct 47174 AACTCGCCAGCGAGGACACGGCG-AGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTC 47232
Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994
||||||||||||||| |||| |||| ||| ||||||||||| || | | | ||||||
Sbjct 47233 ATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGACCAACAAGCTGTT 47292
Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT 116054
||| | ||| | | || | ||||||||| | |||||| | | ||
Sbjct 47293 GCGCACACCATTTTGCTTGATTTGCTCCTTGAGGCTGGTCCAGTCCCAAAGATCCGATGG 47352
Query 116055 CTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 116114
| | |||||| || | || ||||| || || || | || || ||||| | ||
Sbjct 47353 GGTGACATTCCACATGTCGTATTGAAGGATGCCCTGCGAGACGGGAGAACCCTCGTAGGT 47412
Query 116115 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 116174
|| ||||| || |||| || | || | | ||| | ||| || || || ||
Sbjct 47413 AGAGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGACGCAGTCAAGGCGGCATGGTAGAT 47472
Query 116175 TGTCTCAAAAA--TGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGG 116232
||||| || | ||| | || |||| | | ||||| || ||||| | | |||
Sbjct 47473 CGTCTCGAAGATCTGCTTG-TTTAATTGTC-TAGCCTCTGGTGACTCAAAAGGCATACGC 47530
Query 116233 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 116292
| | ||| ||| || ||||| || ||||| || ||||| || || |||| |||
Sbjct 47531 AATGCCAAGAATGTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCATG 47590
Query 116293 TTAGACTTTCGAGCGGTCT-CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 116351
|| || || || ||| ||||| ||| |||| ||| |||| || || | |||
Sbjct 47591 TTGCTGTTACGGGC-CTCTGGGACGGGGTAATAATTGACATCAATAATTCTGTTCAAATT 47649
Query 116352 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 116411
| ||| || | || | ||||| | ||| | | | ||| || ||| || |
Sbjct 47650 GTGAACGACGACTTGGGTAACCTCATGCAACTTCTGGAAGTCATAAGTGC---CTTCGTT 47706
Query 116412 ATTGACATACTTAGGAAGG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 116467
|| | || || |||| || |||| || || | || || |||| ||||||
Sbjct 47707 ATAGTCA-ACAAAGGACGGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAG 47765
Query 116468 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 116527
| | |||||| || || || || || | ||| || || ||| || || | ||||
Sbjct 47766 GGGCGGAGTACTCAATGATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCT 47825
Query 116528 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCG 116587
| || || ||| ||| || ||||||||| ||||| | || | || ||||| |
Sbjct 47826 TCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAG 47885
Query 116588 TTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCAC-AGTGGCGTTGGCTCG 116645
| || | || |||||| || | ||| | | || | | || | ||||| | | ||
Sbjct 47886 TCTGAGCCTCGAGAATGGCGTACCACAGCTTCTGAGCCTTAATCTTCTGGCG--GCCGCG 47943
Query 116646 CCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAG 116705
||||| | |||||||| ||| |||||||| ||||| || || | | || | ||
Sbjct 47944 ACCCTCTGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAG 48003
Query 116706 CCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCAT 116765
|| || || | ||||| | ||| | ||| | ||| || |||||| || |||||
Sbjct 48004 ACCAGGGCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTCAT 48063
Query 116766 GAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC 116825
|||||| || || |||||||| ||| ||||||||| || ||| |||| || | ||
Sbjct 48064 GAAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCC 48123
Query 116826 CTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC 116885
|| || || | || | || || | | ||||| |||||| || || ||||| |
Sbjct 48124 ATGGTTCTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAGAT 48183
Query 116886 CGCGATTG-ACC---CCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAA 116941
|||| | ||| || | | ||| |||| | ||| || || || || || |
Sbjct 48184 GGCGAAAGCACCAGGTCTCTTGTTG-CCACCCTGATCTACGTATCTTGCAGTGTTATTGA 48242
Query 116942 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGA 116999
| || || ||||| || | || || | || ||| || || || || || |||
Sbjct 48243 AGACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGC 48302
Query 117000 CTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 117059
| | || | || |||||||| | ||||||||| || ||| ||| |||||
Sbjct 48303 C--AGTAGCACGGATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCAT 48360
Query 117060 TGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAG 117119
|| || | |||| || ||||||| || || || || |||| | ||| |||
Sbjct 48361 GGCACAAGTCTTGAGGGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACGAG 48420
Query 117120 GAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGG 117170
|||||| ||| | || ||||| ||||| ||||| |||||||| |||||
Sbjct 48421 GAAGCAAGACGAGAGCTG-GGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGG 48471
>seq19
Length=350955
Score = 156 bits (172), Expect = 5e-33
Identities = 351/517 (68%), Gaps = 23/517 (4%)
Strand=Plus/Minus
Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590
||| |||||||| ||||| ||||||||||| || |||||| |||||| |||||||||||
Sbjct 189843 GTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCAGACCGGGCATGAGACC 189784
Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650
|||||||| | |||||| || | | || | ||| ||||||||| ||||| |||
Sbjct 189783 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCACTGAAGAAGATACCCTCAACAGC 189724
Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGT-ATCAAACCACTTCAT 127707
||||| |||| ||||| | ||| |||| ||||| |||| ||| ||| | ||
Sbjct 189723 GGCGAAGGCAATAAGACGTTGGGCGAAGG---TGGACTTCTTGTCGGCAATCCAGTGCAG 189667
Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 127767
||||| | ||||| || ||| || || | ||||| || || | ||||| | |
Sbjct 189666 GGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCTCAATGGCATTGAAGAGATGTGT 189607
Query 127768 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGAC 127827
||| | | || || |||||||| | || ||||| || || || ||| |||||
Sbjct 189606 CTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAAGTCTCGGAGTGGAT 189547
Query 127828 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 127886
| | ||| || | ||| | ||||||| | || || || ||||| |||||
Sbjct 189546 GTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCTGGGATCTGGACCTCGC 189488
Query 127887 CGGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 127943
| | | ||| | | || | ||||| ||||| || || || | || || || |
Sbjct 189487 CAG-AGAATCG--CTCGACAAGGTTCTCGTTGACAATGCCGTCAGATGCGGCGAAGAAGG 189431
Query 127944 CCAGGATAT---ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGT 127997
| ||||| | | | | |||||||| ||| ||||| | || | |||||||||
Sbjct 189430 CGAGGATGTGGGAGATGAAGAATTTCTCGTCA---TCGTTTAGGCGGTTGCTCCAGTCGT 189374
Query 127998 CGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
||||||||| || ||||| | |||||| || |||||
Sbjct 189373 GGAGATCCTTGGATAGATCAATCTCCTCGGCGGTCCA 189337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613503327235800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |