Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq19 147 3e-30 >seq19 Length=350955 Score = 147 bits (162), Expect = 3e-30 Identities = 288/421 (68%), Gaps = 11/421 (3%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| ||| ||| || |||||||| |||| ||||| Sbjct 190128 CTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTT 190069 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | | | || |||| ||||| ||| |||||| | ||| || || || || Sbjct 190068 GGTGGAGCGGTACACCTTCTCGTTGCCGAGGGCCACCAGCAGGCGGTCGGCGACGAACTC 190009 Query 159769 GATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 |||||| || | ||| | | ||| || || || || | ||| || || |||| Sbjct 190008 GATGTA-CTGCTTCATGAGGTTGGCGTTCATGCCTAGTAGGGCACAGGGCAGAGCCTCCG 189950 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGA-CACGTTCGTAC 159886 ||| ||||||| |||||| ||| || ||||| | |||| | || ||||| | | | Sbjct 189949 TCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATCTTCTCGACCACGTCCTTGC 189890 Query 159887 CCCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944 | ||| ||| || ||| ||||| ||||| || |||||| |||||| | Sbjct 189889 CGGGGCGGTTG------TTGAGGTGGGAGAACAGCAGGCAGGCGAAGTCGGTGTGCAGAC 189836 Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004 |||| || || ||||||| |||||||| | | | || || ||||||| |||||| | Sbjct 189835 CCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTTCT 189776 Query 160005 TGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACG 160064 ||||||| || |||| || || || || || || ||||| ||||| || || || || | Sbjct 189775 TGAGCCAGAAGATGGAAGCGAAGGCTCCACTGAAGAAGATACCCTCAACAGCGGCGAAGG 189716 Query 160065 C 160065 | Sbjct 189715 C 189715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150180582800