Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq19 147 3e-30
>seq19
Length=350955
Score = 147 bits (162), Expect = 3e-30
Identities = 288/421 (68%), Gaps = 11/421 (3%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| ||| ||| || |||||||| |||| |||||
Sbjct 190128 CTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTT 190069
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| | | || |||| ||||| ||| |||||| | ||| || || || ||
Sbjct 190068 GGTGGAGCGGTACACCTTCTCGTTGCCGAGGGCCACCAGCAGGCGGTCGGCGACGAACTC 190009
Query 159769 GATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827
|||||| || | ||| | | ||| || || || || | ||| || || ||||
Sbjct 190008 GATGTA-CTGCTTCATGAGGTTGGCGTTCATGCCTAGTAGGGCACAGGGCAGAGCCTCCG 189950
Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGA-CACGTTCGTAC 159886
||| ||||||| |||||| ||| || ||||| | |||| | || ||||| | | |
Sbjct 189949 TCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATCTTCTCGACCACGTCCTTGC 189890
Query 159887 CCCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944
| ||| ||| || ||| ||||| ||||| || |||||| |||||| |
Sbjct 189889 CGGGGCGGTTG------TTGAGGTGGGAGAACAGCAGGCAGGCGAAGTCGGTGTGCAGAC 189836
Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004
|||| || || ||||||| |||||||| | | | || || ||||||| |||||| |
Sbjct 189835 CCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTTCT 189776
Query 160005 TGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACG 160064
||||||| || |||| || || || || || || ||||| ||||| || || || || |
Sbjct 189775 TGAGCCAGAAGATGGAAGCGAAGGCTCCACTGAAGAAGATACCCTCAACAGCGGCGAAGG 189716
Query 160065 C 160065
|
Sbjct 189715 C 189715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795150180582800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |