Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq225 100 2e-15
>seq225
Length=67489
Score = 100 bits (110), Expect = 2e-15
Identities = 114/152 (75%), Gaps = 1/152 (1%)
Strand=Plus/Minus
Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227
||||| ||||| || || | ||| || ||||| ||||| || | ||| | || || |||
Sbjct 35240 TTATCTAGACCGTAGGCGATAGCCGCGGCAGTAGGTTCGTTGACAATGCGCAGCACGTTA 35181
Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287
|| || || || | || ||||| || ||||||||||| || ||||| ||||| |||
Sbjct 35180 AGGCCGGCGATGATGCCAGCATCCTTCGTGGCTTGTCTCTGGTTGTCGTTGAAATAGGCA 35121
Query 518288 GGAACAGTAATAACGGCATCAGTTA-CTTCTT 518318
|| ||||||| |||||| | ||| | ||||||
Sbjct 35120 GGGACAGTAACAACGGCGTGAGTAACCTTCTT 35089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780797340236530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |