Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq225 100 2e-15 >seq225 Length=67489 Score = 100 bits (110), Expect = 2e-15 Identities = 114/152 (75%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 ||||| ||||| || || | ||| || ||||| ||||| || | ||| | || || ||| Sbjct 35240 TTATCTAGACCGTAGGCGATAGCCGCGGCAGTAGGTTCGTTGACAATGCGCAGCACGTTA 35181 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 || || || || | || ||||| || ||||||||||| || ||||| ||||| ||| Sbjct 35180 AGGCCGGCGATGATGCCAGCATCCTTCGTGGCTTGTCTCTGGTTGTCGTTGAAATAGGCA 35121 Query 518288 GGAACAGTAATAACGGCATCAGTTA-CTTCTT 518318 || ||||||| |||||| | ||| | |||||| Sbjct 35120 GGGACAGTAACAACGGCGTGAGTAACCTTCTT 35089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780797340236530