Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq41 486 2e-132 seq169 167 3e-36 seq225 149 8e-31 seq122 102 1e-16 >seq41 Length=250975 Score = 486 bits (538), Expect = 2e-132 Identities = 1066/1590 (67%), Gaps = 23/1590 (1%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || || || | ||| || || ||||| || || Sbjct 183207 TCATCCTCCTCCTTGTACTTCTCGGCCTCAGCAAGCATGCGCTCGATATCTTCCTTTGAC 183266 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 || | ||||| || || || || |||||| | ||| || || | | |||| || || Sbjct 183267 AAGCGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTGCCGGTGCCCTTCTCGACA 183326 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || ||||||| |||||| | || | ||| || || | Sbjct 183327 GCCGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGAGGGACA 183386 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | |||||||| || || || || | || || |||| || | |||| ||| | Sbjct 183387 CCACGCGGTGCGGGCGGGATTCCAGTAAGCTCGAACTTACCGAGCAGGTTGTTGTCCTTG 183446 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | ||| ||||| || || |||| ||| ||| |||| || || || Sbjct 183447 GTGCGTTGACGCTCACCCTCGTATACTTGAATGAGCACACCAGGCTGGTTGTCGGAGAAA 183506 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | || || || || || | || || | | ||| Sbjct 183507 GTGGAGAAGACCTCCGACTTCTTGGTGGGGATAGTGGTGTTGCGGGGGATGAGCTTAGTC 183566 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| || |||| || ||||||| || | || || ||| | |||| Sbjct 183567 ATCATACCACCAGCGGTCTCGATACCGAGAGACAACGGGGCGACATC---GAGAAGCAGG 183623 Query 6989 ---TC-TTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCC 7042 || ||| | || | | | |||| | | ||| || || ||||| | || Sbjct 183624 ATCTCGTTGGTCGACTTGGAGCTGGTGTCACCAGAGAGGATAGCAGCCTGGACGGCGGCA 183683 Query 7043 CCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAA 7102 ||||| ||||| |||||||||||||| || | ||| || | || |||||||| || || Sbjct 183684 CCGTAGGCGACAGCCTCATCGGGGTTGATGGATTTGTTGGGCTCCTTACCGTTGAAGTAG 183743 Query 7103 TCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCA 7162 || | | | | ||||| ||||| || || || |||||||| | ||||| || Sbjct 183744 TCGGTAATGAGCTTCTGAATGCGGGGGATACGGGTGGAGCCACCGACAAGGACGATCTCG 183803 Query 7163 TTCACTTTCGATTTATCGATCTTTGAGTCT-CGAAGTGTTTTTTCGACAGGTTCCATACA 7221 | || | || || |||||||| | ||| | ||| | ||||||| | ||| Sbjct 183804 TGGACCTGGGACTTGTCGATCTTGGCATCTGCCAAGACACGAT-CGACAGGCTGGATAGT 183862 Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281 ||||| | ||| ||||| || || || || |||||||| ||||| || ||||| Sbjct 183863 GGATCGGAAGAGATCCTGGCACAGCTCTTCGAATCGAGCACGGGTGATGGAAGTGTAGAA 183922 Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGT 7341 |||| || ||||| | || || || || || | || ||||| | |||||| | || Sbjct 183923 GTCAATACCTTCGTACAGGGAGTCGATCTCGATCGAAGTCTGTGCAGACGAAGAAAGGGT 183982 Query 7342 TCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAAT 7401 ||||| || |||||||| || ||||| | ||| || || ||||| | |||| ||| | Sbjct 183983 ACGCTTGGCACGCTCACAGGCGGTTCGGAGACGTCGGAGAGCACGAGCGTTAGTGGATAG 184042 Query 7402 ATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAA 7461 ||| ||||| || || || || ||||| | |||||| | ||||| || || Sbjct 184043 ATCCTTCTTGTGCTTGCGCTTGAACTCGTTGACGAAGTGGTTGACGAGTCGGTTGTCAAA 184102 Query 7462 ATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTC 7521 || |||||||||||||| || || || || || | ||||| || |||||||| | || Sbjct 184103 GTCCTCACCACCCAAGTGAGTGTCACCAGCAGTAGACTTGACCTCGAAGATACCCTCCTC 184162 Query 7522 AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGT 7581 ||| | | | || ||||| || ||||||||||| || || || || || ||||| Sbjct 184163 GATGGTCAGAAGGGAGACATCGAAGGTACCACCACCAAGATCGAAGATCAGAACGTTTCG 184222 Query 7582 ATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641 || | || ||||| || |||||||| ||||| || || ||||| || || ||||| Sbjct 184223 CTCACCCTCGGCCTTCTTGTCAAGACCGTAGGCGATGGCAGCAGCCGTAGGCTCGTTAAT 184282 Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 || || ||| ||||| ||||||||| | || || || || ||||||||||| || Sbjct 184283 GATTCGGAGAACGTTCAAGCCAGCAATGAGACCTGCGTCCTTGGTGGCTTGTCGTTGAGA 184342 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 ||||| |||||||||||||| || | || || | ||||| | || |||||||| Sbjct 184343 GTCGTTGAAGTAGGCCGGGACGGTGATAACGGCATTGGTGACAGTACCTCCTAGATACGA 184402 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || ||| | || ||||| ||||| || ||||| || || ||||| |||| | ||| || Sbjct 184403 CTCGGCGGTCTCCTTCATCTTGGTCAGGACCATAGAGGAGATCTCCTCAGGAGTAAATTG 184462 Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT---ATCCGCAGCACCGGGGAT 7878 ||| | || || || | ||||| || || || || || || | || || Sbjct 184463 CTTCTTCTCGCCCTTGTACTCAACCTCGATAATAGGCTTGCCATTCTTCTCA------AT 184516 Query 7879 AACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCC 7938 ||||| | | | | ||||| ||| |||| |||| |||| || || |||| || Sbjct 184517 GACCTTGAAGGGGAAGTGCTTCATGTCGGCTTGAACCTCAGGGTCGGAGAATTTTCGACC 184576 Query 7939 GATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGC 7998 || |||||||| || || || || ||||| | ||||||||| || |||||||| || Sbjct 184577 AATGAGACGCTTAGCGTCGAAGACGGTGTTGTGGGGGTTCATAGCAACCTGGTTCTTGGC 184636 Query 7999 CGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCG 8058 || || ||||| || || || | ||||| || || ||| | || ||||| || || Sbjct 184637 GGCATCACCGATCAGTCGCTC---CGTGTCCGTGAAGGCCACGAAGGACGGGGTGGTCCG 184693 Query 8059 ATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGA 8118 || ||||||||||| || || ||||| | ||||| | | |||| || || ||||| Sbjct 184694 GTTACCTTGGTCGTTTGCGATGATTTCGATTCGGTCATCGCGGAAGACACCTACACACGA 184753 Query 8119 ATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || ||||| |||| ||| Sbjct 184754 GTAGGTCGTGCCCAAGTCAATTCCGACTGC 184783 >seq169 Length=99563 Score = 167 bits (184), Expect = 3e-36 Identities = 366/544 (67%), Gaps = 11/544 (2%) Strand=Plus/Minus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAAT--GGATGTATAGAAATCAACGCCGTCGTATAAC 7300 ||| ||||| ||||| |||||||| || ||| | | |||||| |||||||| | | | Sbjct 12422 CAGGTCCTCGAAACGAGCACGGGTGATCTGGAGGAA--GAAATCCTCGCCGTCGAAAAGC 12365 Query 7301 GAATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 || || || |||||||| || ||||| | | | | | | |||||||| || ||||| | Sbjct 12364 GAGTCGATCTCAATGGTGGTCTGTGCACCATTGGACAGA--GTTCGCTTAGCACGCTCGC 12307 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 | || ||||| | | ||||| || ||||||| || || ||||| ||||| || | Sbjct 12306 AAGCAGTTCGAAGTCTTCGAAGAGCTCGCGGGTCGCCAGAGATATCCTTCTTGGTCTTGC 12247 Query 7419 GTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478 | | || || | | |||| ||| || | | |||||||| | |||||| | | Sbjct 12246 GCTGGAATTCCTTCTTGCAGTGCTCAAGAAGGTTGGTGTCGAAATCCTGACCACCAAGAT 12187 Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAA 7538 | ||||| || || || || | || || | ||| || | |||||| | | || | Sbjct 12186 GGGTATCACCGGCAGTAGCCCTAACAGTGAAAACACCACCCTGAATGTTAAGAAGGGACA 12127 Query 7539 CATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGT---CTTTGT 7595 |||| || ||||||||||| ||||| | ||||| || || || | || |||| Sbjct 12126 CATCGAAGGTACCACCACCAAGGTCGTAGATGAGCACATTGCGCTCCTTGTTAGACTTGT 12067 Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 | | | ||||| |||||||| || || || || || || || ||||| || || Sbjct 12066 TAGAGCCTAAGCCGTAGGCGATAGCAGCGGCAGTGGGCTCGTTGATGATACGGAGCACGT 12007 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 | || || | ||| | | ||||| || || || || ||||| |||||| ||||||| Sbjct 12006 TAAGCCCCGAAATGGAACCAGCATCCTTGGTGGCCTGACGTTGGTTATCGTTGAAGTAGG 11947 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 | || ||||| | || || | | || ||||| || || | | || ||||| || | Sbjct 11946 CAGGTACCGTAATAACAGCCTTCTCAACCTTCTTGCCAAGCTTGGTCTCGGCGATCTCCT 11887 Query 7776 TCAT 7779 |||| Sbjct 11886 TCAT 11883 >seq225 Length=67489 Score = 149 bits (164), Expect = 8e-31 Identities = 236/335 (70%), Gaps = 5/335 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||| | || || || || || || || ||| || || | || Sbjct 35378 TCGAAATCTTCACCACCAAGATGGGTGTCACCGGCAGTAGCCAAGACCTCGAAAACGCCG 35319 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||||| | | || |||||||| || |||||||| || || | | || | | Sbjct 35318 TCTTCAATGGAGAGAAGAGAGACATCAAAAGTGCCACCACCGAGATCGTAGACGATAATG 35259 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || || | | ||||||| |||||||| ||||||||||| || || ||||| Sbjct 35258 TGGCGCTCACCGCC---GGTCTTATCTAGACCGTAGGCGATAGCCGCGGCAGTAGGTTCG 35202 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCG 7695 || | ||| || || ||| ||||| || || | |||| ||||| ||||| ||||||| Sbjct 35201 TTGACAATGCGCAGCACGTTAAGGCCGGCGAT-GATGCCAGCATCCTTCGTGGCTTGTCT 35143 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| || ||||| ||||| || || || |||| || || ||||| ||||| Sbjct 35142 CTGGTTGTCGTTGAAATAGGCAGGGACAGTAACAACGGCGTGAGTAACCTTCTTGCCGAG 35083 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAA 7790 || ||||| || | || ||||| ||| ||||| Sbjct 35082 GTAGGATTCGGCAACCTCCTTCATCTTGCCAAGAA 35048 >seq122 Length=136518 Score = 102 bits (112), Expect = 1e-16 Identities = 357/549 (65%), Gaps = 15/549 (3%) Strand=Plus/Plus Query 105453 ACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAG 105512 ||| || | |||||| |||||||| || | || ||||| | || || ||||| | || Sbjct 47944 ACCCTCTGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAG 48003 Query 105513 ACCCTTTGCCTGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCAT 105572 ||| || | |||||| | | | ||| | |||| ||||| |||||||| Sbjct 48004 ACCAGGGCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTCAT 48063 Query 105573 GAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACC 105632 ||| | ||| |||||||| | || ||||| || || | | || || | || Sbjct 48064 GAAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCC 48123 Query 105633 TTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGAC 105692 || ||| |||| || || || |||| || ||| | |||||| || || | |||| Sbjct 48124 ATGGTTCTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAGAT 48183 Query 105693 TGCAATAG-ACC----CTTTACGACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTA 105747 || | || ||| || | | ||| | || ||| || |||||||| || |||| Sbjct 48184 GGCGAAAGCACCAGGTCTCTT-GTTGCCACCCT-GATCTACGTATCTTGCAGT---GTTA 48238 Query 105748 T---ACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGT 105804 | | || |||| ||| || | ||| || | || || || || || ||| ||| | | Sbjct 48239 TTGAAGACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTAT 48298 Query 105805 GATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATA 105864 || | | ||||| | ||| | || | |||||||| || ||| ||| ||| Sbjct 48299 GAGCCAGTAGCACGGATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATC 48358 Query 105865 CGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATC 105924 ||||| || | || ||||| ||||| || || ||||| ||||| | | | Sbjct 48359 ATGGCACAAGTCTTGAGGGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACG 48418 Query 105925 AGGAAACACGATGACATTTGTGGTCTGGG-TGTACCAGCATTGAACAGAGTTGGTGTTGC 105983 ||||| || || || | || || ||||| ||| ||||||||||| |||||||| | || Sbjct 48419 AGGAAGCAAGACGAGAGCTG-GGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGGGGAAGC 48477 Query 105984 ATGAATGAA 105992 |||| |||| Sbjct 48478 ATGAGTGAA 48486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128790724200