Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq122 280 2e-70
seq19 129 7e-25
>seq122
Length=136518
Score = 280 bits (310), Expect = 2e-70
Identities = 915/1399 (65%), Gaps = 27/1399 (2%)
Strand=Plus/Minus
Query 111604 TGGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTG 111663
|||| | |||||| | ||| ||||||| || || |||| ||| || || ||| |||
Sbjct 48587 TGGAGAGACCACAGCATATGATCATGCGTGTGGCTGTCGGCATCTGGGGCGACGATGTTG 48528
Query 111664 ATTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAA 111723
| || | |||| ||| || ||||| | |||| || || | ||||
Sbjct 48527 AGAAGGTCATTCAGACCTACAACCTCATGTCTAGCAAATACTTCACTCATGCTTCCCCAA 48468
Query 111724 CCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACA 111783
| |||||||| ||||| ||||| |||| | || ||| ||||| | | | |
Sbjct 48467 CTCTCTTCAATGCTGGGACACCCCAGGCCCAGCTCTCGTCTTGCTTCCTCGTCGACATGA 48408
Query 111784 AGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGT 111843
|||| ||| || | || || |||| ||| |||| |||||| ||||| |||
Sbjct 48407 AGGACGATAGCATTGAGGGTATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAAGA 48348
Query 111844 GGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAG 111901
||| |||||||| || | ||||||| || | || | | ||| || ||
Sbjct 48347 TGGCCGGTGGTATTGGTCTCAACATCCACCGCATCCGTGCTACT--GGCTCATACATTGC 48290
Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961
|| || || || || | || ||| | || ||||| || || || || ||| ||
Sbjct 48289 TGGCACTAACGGCACCTCGAACGGCATTGTACCCATGCTACGTGTCTTCAATAACACTGC 48230
Query 111962 GCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGC 112017
| || ||| | || | ||| | | || || || |||| |||| || ||||
Sbjct 48229 AAGATACGTAGATCAGGGTGG-CAACAAGAGACCTGGTGCTTTCGCCATCTACCTCGAGC 48171
Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077
| |||||| ||||| | | ||||||||||| | || ||||| || | ||||| |
Sbjct 48170 CTTGGCACTCGGATGTTTTCGAGTTCCTTGATCTTCGAAAGAACCATGGCAAGGAGGAAG 48111
Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137
|| ||||||||||||| |||||||||||||| |||||||||||||| | ||||
Sbjct 48110 TTCGTGCCCGCGATCTCTTCCTGGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTTG 48051
Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197
|| ||| ||| | ||| | ||| | ||||| || || || ||||| | || |
Sbjct 48050 AGAAGAATGGAGAGTGGACCCTCATGTGTCCTAACGAGTGCCCTGGTCTAGCTGACGTTT 47991
Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC-- 112255
|| || ||||| || ||||| ||| |||||||| | ||| ||| ||| | ||
Sbjct 47990 ATGGCGATGAGTTCGAGGCCCTGTACGAGAAGTACGAAGCAGAGGGTC--GCGGCCGCCA 47933
Query 112256 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314
|| | | ||| | || | ||||| | || |||||| || |||| || |||||||| |
Sbjct 47932 GAAGATTAAGGCT-CAGAAGCTGTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGAA 47874
Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374
|| | ||||||||||| || ||| |||| |||||||| || |||||| | |||
Sbjct 47873 ATCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAATCTTGGTA 47814
Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434
|| || || || || || || || ||| | || | | | | |||||| ||
Sbjct 47813 CTATTCGCAGCTCGAATCTTTGCACCGAGATCATTGAGTACTCCGCCCCTGATGAGGTGG 47754
Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--AC 112492
|||| || ||| | || || |||| | || | ||| || | | | || ||| ||
Sbjct 47753 CTGTCTGCAACTTAGCTTCCCTCGCGTTGCCGTCCTTTGTTGA-CTATA-ACGAAGGCAC 47696
Query 112493 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGT 112552
| ||| | | || | || || ||||| || ||| | || | |||||| |
Sbjct 47695 TTATGACTTCCAGAAGTTGCATGAGGTTACCCAAGTCGTCGTTCACAATTTGAACAGAAT 47636
Query 112553 TATTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611
||||||| |||| ||||||||| ||| || ||||| || ||| |||||||||
Sbjct 47635 TATTGATGTCAATTATTACCCCGTCCCAGA-GGCCCGTAACAGCAACATGCGACACCGTC 47577
Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT 112670
| |||||||| ||||| || ||||| || ||| |||| | | ||| || | |||
Sbjct 47576 CCATTGGTCTTGGTGTTCAGGGTCTTGCTGATACATTCTTGGCATTG-CGTATGCCTTTT 47518
Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730
|| || || || | || | || || || || ||||| || || || |||||
Sbjct 47517 GAGTCACCAGAGGCTAGACAATTAAACAAGCAGATCTTCGAGACGATCTACCATGCCGC- 47459
Query 112731 CTTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789
||||| ||| ||||| | || |||| || || || || |||| ||||||||
Sbjct 47458 CTTGACTGCGTCCACGGAGATTGCCAAGGTCGAAGGCCCTTACTCTACCTACGAGGGTTC 47399
Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTCACT 112848
||| | || || || | ||||||| || |||| |||| || | ||| | || |
Sbjct 47398 TCCCGTCTCGCAGGGCATCCTTCAATACGACATGT-GGAATGTCACCCCATCGGATCTTT 47340
Query 112849 ACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908
|||||| | |||||||| | |||||| | || ||| | || ||||| | |||
Sbjct 47339 GGGACTGGACCAGCCTCAAGGAGCAAATCAAGCAAAATGGTGTGCGCAACAGCTTGTTGG 47280
Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968
| || || ||||| || ||| ||| | || ||||||||||| ||||| ||||| || |
Sbjct 47279 TCGCCCCCATGCCCACGGCCAGCACATCCCAGATCTTGGGTAACAATGAGTGCTTCGAGC 47220
Query 112969 CCTACACGACGAACATCTA 112987
| ||||| | ||||||||
Sbjct 47219 CTTACACTTCCAACATCTA 47201
>seq19
Length=350955
Score = 129 bits (142), Expect = 7e-25
Identities = 196/276 (71%), Gaps = 6/276 (2%)
Strand=Plus/Plus
Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107
||||| |||| || || ||||| ||| |||||| || ||||| | ||||| |
Sbjct 189571 CTCATTGACACCTACATCAAGGAGCCTGCCCAGAAGACACATCTCTTCAATGCCATTGAG 189630
Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AG 102164
|| |||| || || | ||||| || || ||||| || | ||| ||| |||| ||
Sbjct 189631 ACCATTCCTTGCATCCGCAAGAAGGCCGACTGGGCCCTGCACTGGATTGCCGACAAGAAG 189690
Query 102165 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 102224
|| |||| || | || || | || || || ||||||||||||||||||| |
Sbjct 189691 TCCA---CCTTCGCCCAACGTCTTATTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGT 189747
Query 102225 GGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 102284
|| ||||| | || | |||||||||||||| ||||||||||| ||||| ||||
Sbjct 189748 GGAGCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTC 189807
Query 102285 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320
|||||||| || ||||| ||||| ||||| || |||
Sbjct 189808 TCCAACGAACTCATCTCGCGTGATGAGGGTCTGCAC 189843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620738481563600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |