Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq122 280 2e-70 seq19 129 7e-25 >seq122 Length=136518 Score = 280 bits (310), Expect = 2e-70 Identities = 915/1399 (65%), Gaps = 27/1399 (2%) Strand=Plus/Minus Query 111604 TGGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTG 111663 |||| | |||||| | ||| ||||||| || || |||| ||| || || ||| ||| Sbjct 48587 TGGAGAGACCACAGCATATGATCATGCGTGTGGCTGTCGGCATCTGGGGCGACGATGTTG 48528 Query 111664 ATTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAA 111723 | || | |||| ||| || ||||| | |||| || || | |||| Sbjct 48527 AGAAGGTCATTCAGACCTACAACCTCATGTCTAGCAAATACTTCACTCATGCTTCCCCAA 48468 Query 111724 CCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACA 111783 | |||||||| ||||| ||||| |||| | || ||| ||||| | | | | Sbjct 48467 CTCTCTTCAATGCTGGGACACCCCAGGCCCAGCTCTCGTCTTGCTTCCTCGTCGACATGA 48408 Query 111784 AGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGT 111843 |||| ||| || | || || |||| ||| |||| |||||| ||||| ||| Sbjct 48407 AGGACGATAGCATTGAGGGTATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAAGA 48348 Query 111844 GGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAG 111901 ||| |||||||| || | ||||||| || | || | | ||| || || Sbjct 48347 TGGCCGGTGGTATTGGTCTCAACATCCACCGCATCCGTGCTACT--GGCTCATACATTGC 48290 Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 || || || || || | || ||| | || ||||| || || || || ||| || Sbjct 48289 TGGCACTAACGGCACCTCGAACGGCATTGTACCCATGCTACGTGTCTTCAATAACACTGC 48230 Query 111962 GCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGC 112017 | || ||| | || | ||| | | || || || |||| |||| || |||| Sbjct 48229 AAGATACGTAGATCAGGGTGG-CAACAAGAGACCTGGTGCTTTCGCCATCTACCTCGAGC 48171 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 | |||||| ||||| | | ||||||||||| | || ||||| || | ||||| | Sbjct 48170 CTTGGCACTCGGATGTTTTCGAGTTCCTTGATCTTCGAAAGAACCATGGCAAGGAGGAAG 48111 Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 || ||||||||||||| |||||||||||||| |||||||||||||| | |||| Sbjct 48110 TTCGTGCCCGCGATCTCTTCCTGGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTTG 48051 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197 || ||| ||| | ||| | ||| | ||||| || || || ||||| | || | Sbjct 48050 AGAAGAATGGAGAGTGGACCCTCATGTGTCCTAACGAGTGCCCTGGTCTAGCTGACGTTT 47991 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC-- 112255 || || ||||| || ||||| ||| |||||||| | ||| ||| ||| | || Sbjct 47990 ATGGCGATGAGTTCGAGGCCCTGTACGAGAAGTACGAAGCAGAGGGTC--GCGGCCGCCA 47933 Query 112256 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 || | | ||| | || | ||||| | || |||||| || |||| || |||||||| | Sbjct 47932 GAAGATTAAGGCT-CAGAAGCTGTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGAA 47874 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 || | ||||||||||| || ||| |||| |||||||| || |||||| | ||| Sbjct 47873 ATCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAATCTTGGTA 47814 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 || || || || || || || || ||| | || | | | | |||||| || Sbjct 47813 CTATTCGCAGCTCGAATCTTTGCACCGAGATCATTGAGTACTCCGCCCCTGATGAGGTGG 47754 Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--AC 112492 |||| || ||| | || || |||| | || | ||| || | | | || ||| || Sbjct 47753 CTGTCTGCAACTTAGCTTCCCTCGCGTTGCCGTCCTTTGTTGA-CTATA-ACGAAGGCAC 47696 Query 112493 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGT 112552 | ||| | | || | || || ||||| || ||| | || | |||||| | Sbjct 47695 TTATGACTTCCAGAAGTTGCATGAGGTTACCCAAGTCGTCGTTCACAATTTGAACAGAAT 47636 Query 112553 TATTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611 ||||||| |||| ||||||||| ||| || ||||| || ||| ||||||||| Sbjct 47635 TATTGATGTCAATTATTACCCCGTCCCAGA-GGCCCGTAACAGCAACATGCGACACCGTC 47577 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT 112670 | |||||||| ||||| || ||||| || ||| |||| | | ||| || | ||| Sbjct 47576 CCATTGGTCTTGGTGTTCAGGGTCTTGCTGATACATTCTTGGCATTG-CGTATGCCTTTT 47518 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730 || || || || | || | || || || || ||||| || || || ||||| Sbjct 47517 GAGTCACCAGAGGCTAGACAATTAAACAAGCAGATCTTCGAGACGATCTACCATGCCGC- 47459 Query 112731 CTTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 ||||| ||| ||||| | || |||| || || || || |||| |||||||| Sbjct 47458 CTTGACTGCGTCCACGGAGATTGCCAAGGTCGAAGGCCCTTACTCTACCTACGAGGGTTC 47399 Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTCACT 112848 ||| | || || || | ||||||| || |||| |||| || | ||| | || | Sbjct 47398 TCCCGTCTCGCAGGGCATCCTTCAATACGACATGT-GGAATGTCACCCCATCGGATCTTT 47340 Query 112849 ACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908 |||||| | |||||||| | |||||| | || ||| | || ||||| | ||| Sbjct 47339 GGGACTGGACCAGCCTCAAGGAGCAAATCAAGCAAAATGGTGTGCGCAACAGCTTGTTGG 47280 Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968 | || || ||||| || ||| ||| | || ||||||||||| ||||| ||||| || | Sbjct 47279 TCGCCCCCATGCCCACGGCCAGCACATCCCAGATCTTGGGTAACAATGAGTGCTTCGAGC 47220 Query 112969 CCTACACGACGAACATCTA 112987 | ||||| | |||||||| Sbjct 47219 CTTACACTTCCAACATCTA 47201 >seq19 Length=350955 Score = 129 bits (142), Expect = 7e-25 Identities = 196/276 (71%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107 ||||| |||| || || ||||| ||| |||||| || ||||| | ||||| | Sbjct 189571 CTCATTGACACCTACATCAAGGAGCCTGCCCAGAAGACACATCTCTTCAATGCCATTGAG 189630 Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AG 102164 || |||| || || | ||||| || || ||||| || | ||| ||| |||| || Sbjct 189631 ACCATTCCTTGCATCCGCAAGAAGGCCGACTGGGCCCTGCACTGGATTGCCGACAAGAAG 189690 Query 102165 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 102224 || |||| || | || || | || || || ||||||||||||||||||| | Sbjct 189691 TCCA---CCTTCGCCCAACGTCTTATTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGT 189747 Query 102225 GGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 102284 || ||||| | || | |||||||||||||| ||||||||||| ||||| |||| Sbjct 189748 GGAGCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTC 189807 Query 102285 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| || ||||| ||||| ||||| || ||| Sbjct 189808 TCCAACGAACTCATCTCGCGTGATGAGGGTCTGCAC 189843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738481563600