Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq122 158 1e-33
seq60 134 2e-26
>seq122
Length=136518
Score = 158 bits (174), Expect = 1e-33
Identities = 990/1564 (63%), Gaps = 61/1564 (4%)
Strand=Plus/Plus
Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTT--TT 109564
|| || ||||| || ||||| |||||| ||||| ||||| | || | | || ||
Sbjct 46955 GATTGGGACTGGTCAATGAACGCACCACGGTCAGCGGCCATCTGGACAA--CGGTTCGTT 47012
Query 109565 GGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGT 109624
|| ||||||||||| |||||||| | | |||||||||| | ||||||| |||||
Sbjct 47013 GGGATATTTCCCAGACGGTCTTGTAAAGAGCCTTGATATCAGCAGGAATGTTGGGGATGT 47072
Query 109625 TTTGAATAGAGCCACCAGCCTTCACCATGAGA---TCCTTCATCTCTTTC-GACCAGAGA 109680
| ||||| || || || || | |||| | | |||||| || || |||||||||
Sbjct 47073 TCTGAATTGAACCGCC---CTCGGCAATGATACGGTTCTTCATG-CTATCAGACCAGAGA 47128
Query 109681 CCGACCTTTTTGAGATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCACCAGC 109736
|| | | || || | |||| || | || || || || || |||||
Sbjct 47129 CCCATGTCAACAAGGTCCTTGAGCAACCAGGGG----TTAACGACCTGGAACTCGCCAGC 47184
Query 109737 AAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAG 109796
|| || || ||||||||| | ||||| || ||||| ||||||||||| || |
Sbjct 47185 GAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTCATTGTTACCCAA 47244
Query 109797 GATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTT 109856
||| || | ||| || ||||||||||| || | | | ||||| || | ||| ||
Sbjct 47245 GATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGACCAACAAGCTGTTGCGCACACCATT 47304
Query 109857 CGTCTTTACCCGCTCACGCATTGCGTC----CCAATCATAACGACCACTAAATTTAGTCT 109912
||| | |||| ||| | | ||| || || || | | | | | |
Sbjct 47305 TTGCTTGATTTGCTCC----TTGAGGCTGGTCCAGTCCCAAAGATC-CGA----TGGGGT 47355
Query 109913 CACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCT 109972
|| || |||||| || |||||| | |||| | | |||||||||| | | |
Sbjct 47356 GAC-ATTCCACATGTCGTATTGAAGGATGCCCTGCGAGACGGGAGAACCCTCGTAGGTAG 47414
Query 109973 CGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCC-TCTAGTGCCGCATGATACATA 110031
||| | || || |||| ||| | ||| | || || || || || ||||| || ||
Sbjct 47415 AGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGACGCAGTCAAG-GCGGCATGGTAGATC 47473
Query 110032 GTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CA-- 110088
||||| || || || || | | | || |||| | || || || | || ||
Sbjct 47474 GTCTCGAAGATCTGCTTGTTTAATTGTCTAGCCTCTGGTGACTCAAAAGGCATACGCAAT 47533
Query 110089 -CAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCAT 110147
| |||||| | || || |||||||||||||| ||||||||||| || || |||
Sbjct 47534 GCCAAGAATGTA----TCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCAT 47589
Query 110148 GTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATT 110207
||| | || || | ||||||||| | ||| || || | | || | |||
Sbjct 47590 GTTGCTGTTACGGGCCTCTGGGACGGGGTAATAATTGACATCAATAATTCTGTTCAAATT 47649
Query 110208 CTTCGTCACAGTCTTCG-TGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCT 110266
| || | ||| | | | ||||| | || | | | || | || | | || |
Sbjct 47650 GTGAACGAC-GACTTGGGTAACCTCATGCAACTTCTGGAAGTCATAAGTG--CCT-TCGT 47705
Query 110267 TATTG---ACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTT 110323
||| | ||| | || | || | || || | ||||| |||| ||| ||
Sbjct 47706 TATAGTCAACAAAGGACGGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAG 47765
Query 110324 TGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCT 110383
| ||| ||| || | || || || || | || || || ||| ||| | ||||
Sbjct 47766 GGGCGGAGTACTCAATGATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCT 47825
Query 110384 TCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCG 110443
|||| || ||| |||||| |||||| || |||||| | || | ||||| || |
Sbjct 47826 TCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAG 47885
Query 110444 TCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGA 110502
|||| | || ||||||||| | ||| | | || | | | | || | || ||
Sbjct 47886 TCTGAGCCTCGAGAATGGCGTACCACAGCTTCTGAGCCTTAATCTTCTG-GCGGCCGCGA 47944
Query 110503 CCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGA 110562
|| || | |||||||| ||||| | |||| || || | || || || |||| |||
Sbjct 47945 CCCTCTGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAGA 48004
Query 110563 CCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATG 110622
|| || || ||||| | ||||| ||| | |||| || |||||| | ||||||
Sbjct 48005 CCAGGGCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTCATG 48064
Query 110623 AACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCT 110682
|| || ||||||||||| | ||| ||| || || ||| |||| | || || | ||
Sbjct 48065 AAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCA 48124
Query 110683 TGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACA 110742
||||| || || || | || || | | |||||||||||| || ||||| ||||
Sbjct 48125 TGGTTCTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAGATG 48184
Query 110743 GCGATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798
|||| | || || | | || |||| | || || | ||| ||| ||||||
Sbjct 48185 GCGAAAGCACCAGGTCTCTTGTTG-CCACCCTGATCTACGTATCTTGCAGTGTTATTGAA 48243
Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858
||| | ||||| || | ||| || | || || || || || ||| ||
Sbjct 48244 GACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCC 48303
Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918
| | ||||| ||| |||||| | | |||||||||||| ||| ||| || ||
Sbjct 48304 AGTAGCACGGATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGC 48363
Query 110919 AC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977
|| | ||| |||| || | || ||||| ||||| ||| |||| || | | || |
Sbjct 48364 ACAAGTCT-TGAGGGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACGAGGA 48422
Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037
||||||| || | ||| | | || || || ||||||||||| || || | ||||||
Sbjct 48423 AGCAAGACGAGAGCTGGGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGGGGAAGCATGAG 48482
Query 111038 TGAA 111041
||||
Sbjct 48483 TGAA 48486
>seq60
Length=210480
Score = 134 bits (148), Expect = 2e-26
Identities = 283/413 (69%), Gaps = 13/413 (3%)
Strand=Plus/Minus
Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTG----- 11646
|||||| |||||||| ||||| | |||||||| || ||| || |||||||||
Sbjct 200221 GAAACCATCCATTTCCGTGAGGATCTGGTTGAGGGTAGCTTCTCGTTCATCGTTGCCTCC 200162
Query 11647 GAGGGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACG 11706
|| | || ||| ||| ||| |||||| || ||||||||||| || || | |
Sbjct 200161 GAATCGTTGCC-CCT-CCGCACGAGATCTACCGATGGCATCAATCTCATCAATAAAGATG 200104
Query 11707 ATACACGGTTGGTTGGCACGTGCCTGTT-CGAAAAGTTCACGTACACGCTTCGCTCCAAC 11765
|||||||| || || || ||| |||| || || | || || ||| |||||
Sbjct 200103 ATACACGGCGTATTTTTTCGCGC-TGTGGCGAAGAGATCCCTAACTCGGGACGCACCAAC 200045
Query 11766 ACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGAC 11823
||| ||||||||||||||||| | || | || | | || || ||| || || ||
Sbjct 200044 ACCAACGAACATCTCAACGAATTCTGAACCGCTTA-CGCTAAA-GAATGGTACTCCTGAT 199987
Query 11824 TCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883
|| |||||| ||||| || || | ||||||||||| ||||| | ||||||||||
Sbjct 199986 TCGCCAGCGGTGGCTTTCGCAAGTAATGTCTTACCCGTTCCAGGGGGTCCAGCGAGAATC 199927
Query 11884 GCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCC 11943
|| || || || ||||| |||||| || | | || || ||||| |||||||| |
Sbjct 199926 GCACCGCGAGGTATCTTCGCACCAAGTCTCTGGAACCGTTCCGGCTTTTTGAGGAAACCG 199867
Query 11944 ACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996
|| | ||| || || | ||||| ||| ||||| ||||||| | |||
Sbjct 199866 ACGAATTCCATAATCTCTTGTTTGGCTTCGTCCATACCGGCAACATCCGAGAA 199814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588972282089000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |