Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq122 158 1e-33 seq60 134 2e-26 >seq122 Length=136518 Score = 158 bits (174), Expect = 1e-33 Identities = 990/1564 (63%), Gaps = 61/1564 (4%) Strand=Plus/Plus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTT--TT 109564 || || ||||| || ||||| |||||| ||||| ||||| | || | | || || Sbjct 46955 GATTGGGACTGGTCAATGAACGCACCACGGTCAGCGGCCATCTGGACAA--CGGTTCGTT 47012 Query 109565 GGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGT 109624 || ||||||||||| |||||||| | | |||||||||| | ||||||| ||||| Sbjct 47013 GGGATATTTCCCAGACGGTCTTGTAAAGAGCCTTGATATCAGCAGGAATGTTGGGGATGT 47072 Query 109625 TTTGAATAGAGCCACCAGCCTTCACCATGAGA---TCCTTCATCTCTTTC-GACCAGAGA 109680 | ||||| || || || || | |||| | | |||||| || || ||||||||| Sbjct 47073 TCTGAATTGAACCGCC---CTCGGCAATGATACGGTTCTTCATG-CTATCAGACCAGAGA 47128 Query 109681 CCGACCTTTTTGAGATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCACCAGC 109736 || | | || || | |||| || | || || || || || ||||| Sbjct 47129 CCCATGTCAACAAGGTCCTTGAGCAACCAGGGG----TTAACGACCTGGAACTCGCCAGC 47184 Query 109737 AAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAG 109796 || || || ||||||||| | ||||| || ||||| ||||||||||| || | Sbjct 47185 GAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTCATTGTTACCCAA 47244 Query 109797 GATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTT 109856 ||| || | ||| || ||||||||||| || | | | ||||| || | ||| || Sbjct 47245 GATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGACCAACAAGCTGTTGCGCACACCATT 47304 Query 109857 CGTCTTTACCCGCTCACGCATTGCGTC----CCAATCATAACGACCACTAAATTTAGTCT 109912 ||| | |||| ||| | | ||| || || || | | | | | | Sbjct 47305 TTGCTTGATTTGCTCC----TTGAGGCTGGTCCAGTCCCAAAGATC-CGA----TGGGGT 47355 Query 109913 CACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCT 109972 || || |||||| || |||||| | |||| | | |||||||||| | | | Sbjct 47356 GAC-ATTCCACATGTCGTATTGAAGGATGCCCTGCGAGACGGGAGAACCCTCGTAGGTAG 47414 Query 109973 CGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCC-TCTAGTGCCGCATGATACATA 110031 ||| | || || |||| ||| | ||| | || || || || || ||||| || || Sbjct 47415 AGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGACGCAGTCAAG-GCGGCATGGTAGATC 47473 Query 110032 GTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CA-- 110088 ||||| || || || || | | | || |||| | || || || | || || Sbjct 47474 GTCTCGAAGATCTGCTTGTTTAATTGTCTAGCCTCTGGTGACTCAAAAGGCATACGCAAT 47533 Query 110089 -CAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCAT 110147 | |||||| | || || |||||||||||||| ||||||||||| || || ||| Sbjct 47534 GCCAAGAATGTA----TCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCAT 47589 Query 110148 GTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATT 110207 ||| | || || | ||||||||| | ||| || || | | || | ||| Sbjct 47590 GTTGCTGTTACGGGCCTCTGGGACGGGGTAATAATTGACATCAATAATTCTGTTCAAATT 47649 Query 110208 CTTCGTCACAGTCTTCG-TGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCT 110266 | || | ||| | | | ||||| | || | | | || | || | | || | Sbjct 47650 GTGAACGAC-GACTTGGGTAACCTCATGCAACTTCTGGAAGTCATAAGTG--CCT-TCGT 47705 Query 110267 TATTG---ACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTT 110323 ||| | ||| | || | || | || || | ||||| |||| ||| || Sbjct 47706 TATAGTCAACAAAGGACGGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAG 47765 Query 110324 TGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCT 110383 | ||| ||| || | || || || || | || || || ||| ||| | |||| Sbjct 47766 GGGCGGAGTACTCAATGATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCT 47825 Query 110384 TCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCG 110443 |||| || ||| |||||| |||||| || |||||| | || | ||||| || | Sbjct 47826 TCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAG 47885 Query 110444 TCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGA 110502 |||| | || ||||||||| | ||| | | || | | | | || | || || Sbjct 47886 TCTGAGCCTCGAGAATGGCGTACCACAGCTTCTGAGCCTTAATCTTCTG-GCGGCCGCGA 47944 Query 110503 CCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGA 110562 || || | |||||||| ||||| | |||| || || | || || || |||| ||| Sbjct 47945 CCCTCTGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAGA 48004 Query 110563 CCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATG 110622 || || || ||||| | ||||| ||| | |||| || |||||| | |||||| Sbjct 48005 CCAGGGCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTCATG 48064 Query 110623 AACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCT 110682 || || ||||||||||| | ||| ||| || || ||| |||| | || || | || Sbjct 48065 AAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCA 48124 Query 110683 TGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACA 110742 ||||| || || || | || || | | |||||||||||| || ||||| |||| Sbjct 48125 TGGTTCTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAGATG 48184 Query 110743 GCGATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798 |||| | || || | | || |||| | || || | ||| ||| |||||| Sbjct 48185 GCGAAAGCACCAGGTCTCTTGTTG-CCACCCTGATCTACGTATCTTGCAGTGTTATTGAA 48243 Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858 ||| | ||||| || | ||| || | || || || || || ||| || Sbjct 48244 GACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCC 48303 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 | | ||||| ||| |||||| | | |||||||||||| ||| ||| || || Sbjct 48304 AGTAGCACGGATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGC 48363 Query 110919 AC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 || | ||| |||| || | || ||||| ||||| ||| |||| || | | || | Sbjct 48364 ACAAGTCT-TGAGGGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACGAGGA 48422 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 ||||||| || | ||| | | || || || ||||||||||| || || | |||||| Sbjct 48423 AGCAAGACGAGAGCTGGGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGGGGAAGCATGAG 48482 Query 111038 TGAA 111041 |||| Sbjct 48483 TGAA 48486 >seq60 Length=210480 Score = 134 bits (148), Expect = 2e-26 Identities = 283/413 (69%), Gaps = 13/413 (3%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTG----- 11646 |||||| |||||||| ||||| | |||||||| || ||| || ||||||||| Sbjct 200221 GAAACCATCCATTTCCGTGAGGATCTGGTTGAGGGTAGCTTCTCGTTCATCGTTGCCTCC 200162 Query 11647 GAGGGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACG 11706 || | || ||| ||| ||| |||||| || ||||||||||| || || | | Sbjct 200161 GAATCGTTGCC-CCT-CCGCACGAGATCTACCGATGGCATCAATCTCATCAATAAAGATG 200104 Query 11707 ATACACGGTTGGTTGGCACGTGCCTGTT-CGAAAAGTTCACGTACACGCTTCGCTCCAAC 11765 |||||||| || || || ||| |||| || || | || || ||| ||||| Sbjct 200103 ATACACGGCGTATTTTTTCGCGC-TGTGGCGAAGAGATCCCTAACTCGGGACGCACCAAC 200045 Query 11766 ACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGAC 11823 ||| ||||||||||||||||| | || | || | | || || ||| || || || Sbjct 200044 ACCAACGAACATCTCAACGAATTCTGAACCGCTTA-CGCTAAA-GAATGGTACTCCTGAT 199987 Query 11824 TCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883 || |||||| ||||| || || | ||||||||||| ||||| | |||||||||| Sbjct 199986 TCGCCAGCGGTGGCTTTCGCAAGTAATGTCTTACCCGTTCCAGGGGGTCCAGCGAGAATC 199927 Query 11884 GCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCC 11943 || || || || ||||| |||||| || | | || || ||||| |||||||| | Sbjct 199926 GCACCGCGAGGTATCTTCGCACCAAGTCTCTGGAACCGTTCCGGCTTTTTGAGGAAACCG 199867 Query 11944 ACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 || | ||| || || | ||||| ||| ||||| ||||||| | ||| Sbjct 199866 ACGAATTCCATAATCTCTTGTTTGGCTTCGTCCATACCGGCAACATCCGAGAA 199814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972282089000