Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq122 248 1e-60 seq19 102 1e-16 >seq122 Length=136518 Score = 248 bits (274), Expect = 1e-60 Identities = 1129/1758 (64%), Gaps = 49/1758 (3%) Strand=Plus/Plus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| |||||||| || ||||| || || | ||||| || | |||||| | | Sbjct 46856 CGGAGGTAGTACATGCCAGTCTTCAGGCCAAGCTTCCAGCCGGTGAAATGCATGCTGGTG 46915 Query 105650 AGCTTGGACATCGTTGGACTTTCC--ATGAAAAGATTCATACTTTGACTCTGGTCAATGA 105707 | |||| ||| || || || || ||| | ||| | ||| ||||||||||| Sbjct 46916 ATCTTGCCCATAGTGGG--TTCCCTCATGTGGATATTTAGTGATTGGGACTGGTCAATGA 46973 Query 105708 AGCGACCACGTTGTGCCGCCATATCAATGACATCC-TTCATCTTGAT--TTCCCACACTG 105764 | |||||| | || ||||| | |||| | ||| | ||| |||||| || | Sbjct 46974 ACGCACCACGGTCAGCGGCCATCTG---GACAACGGTTCGTTGGGATATTTCCCAGACGG 47030 Query 105765 TGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCG 105824 | ||| ||| |||||||||| | || || | | ||| || ||||||||||| ||| Sbjct 47031 TCTTGTAAAGAGCCTTGATATCAGCAGGAATGTTGGGGATGTTCTGAATTGAACCGCCCT 47090 Query 105825 CCTTGACCATGAGA---TCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCAT 105881 | | | |||| | | |||||| | ||||| ||||| || | || || | Sbjct 47091 C---GGCAATGATACGGTTCTTCATGCTATCAGACCAGAGACCCATGTCAACAAGGTCCT 47147 Query 105882 TGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATG 105940 ||| | ||| || | | ||||| || |||||| | | ||| |||||| Sbjct 47148 TGAGCAACCAGGGGTTAACGACCTGGAACTCGCCAGCGAGGACACGGCG-AGAGTAGATG 47206 Query 105941 TTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTT 106000 || | ||||| || || ||||| ||||| ||||||||||| || | ||| ||| || Sbjct 47207 TTGGAAGTGTAAGGCTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTGCTGGCCGTG 47266 Query 106001 GGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGA 106060 ||||| || || | ||| | ||||| || | ||| |||| |||||| | |||||||| Sbjct 47267 GGCATGGGGGCGACCAACAAGCTGTTGCGCACACCATTTTGCTTGATTTGCTCCTTGAGG 47326 Query 106061 ACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATATCAAATTGAAGCACCC 106118 |||||| | || | ||| | || |||| |||| || ||||||| | | Sbjct 47327 CTGGTCCAGTCCCAAA-GATCCGATGGGGTGACATTCC-ACATGTCGTATTGAAGGATGC 47384 Query 106119 CTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCAC 106178 | || || |||||||||||| | || || | |||| | | | || | || Sbjct 47385 CCTGCGAGACGGGAGAACCCTCGTAGGTAGAGTAAGGGCCTTCGACCTTGGCAATCTCCG 47444 Query 106179 AGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGG 106238 | ||| || || || || || || || || ||||| | || | | | | Sbjct 47445 TGGACGCAGTCAAGGCGGCATGGTAGATCGTCTCGAAGATCTGCTTGTTTAATTGTCTAG 47504 Query 106239 CTTCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACA 106297 | || ||| ||||| | | || || | | ||| ||| || ||||| |||||| Sbjct 47505 CCTCTGGTGACTCAAAAGGCATA-CGCAATGCCAAGAATGTATCAGCAAGACCCTGAACA 47563 Query 106298 CCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAA 106356 || | |||||| || | ||||||||| || || || || ||| ||||| ||| | Sbjct 47564 CCAAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGGGCC-TCTGGGACGGGGTAATA 47622 Query 106357 ATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTT 106416 ||| ||||| | || ||| | ||| | || | | || | ||||| | || Sbjct 47623 ATTGACATCAATAATTCTGTTCAAATTGTGAACGACGACTTGGGTAACCTCATGCAACTT 47682 Query 106417 TTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG----GCGATTGATG 106472 | | ||| |||||| || | || | || || ||| || |||| || | Sbjct 47683 CTGGAAGTCATAAGTGCCT---TCGTTATAGTCA-ACAAAGGACGGCAACGCGAGGGAAG 47738 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 | || ||||| |||||| |||||| | | |||||| | || || || || | | Sbjct 47739 CTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCAATGATCTCGGTGCAAAGAT 47798 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | || || ||| || || | |||||| ||||||||||| |||||| |||||||| Sbjct 47799 TCGAGCTGCGAATAGTACCAAGATTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGT 47858 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCG 106651 | |||||| |||| | || ||||| ||||| | || |||||| || | ||||| | || Sbjct 47859 AAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACAGCTTCT 47918 Query 106652 GCGGCTGGTACAA-TGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTC 106710 | | || | ||||| | | || ||||| || |||||||| ||| ||||| || Sbjct 47919 GAGCCTTAATCTTCTGGCG--GCCGCGACCCTCTGCTTCGTACTTCTCGTACAGGGCCTC 47976 Query 106711 AAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCA 106770 ||||| || || |||| | ||||| || || || ||||| | || | ||| Sbjct 47977 GAACTCATCGCCATAAACGTCAGCTAGACCAGGGCACTCGTTAGGACACATGAGGGTCCA 48036 Query 106771 TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 106830 | ||| || |||||| || |||||||| || || |||||||| || | ||||| Sbjct 48037 CTCTCCATTCTTCTCAACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCCAGGAAGAG 48096 Query 106831 ATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 106890 ||| | ||| | || || | || ||||| ||| | ||||||||||| | | Sbjct 48097 ATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTCGAAAAC 48156 Query 106891 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTT 106946 ||||| |||||| ||||| || |||| |||| || || || | | | ||| | | Sbjct 48157 ATCCGAGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCAGGTCTCTTGTTG-CCACCCT 48215 Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006 ||| ||| || | || ||| || || || || ||||| || | ||| || | || Sbjct 48216 GATCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGGTACAATGCCGTTCGAGG 48275 Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 107066 || || || || ||| || | | || | | ||||||| | |||| Sbjct 48276 TGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCGGTGGATGTTGAGACCAA 48335 Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126 |||| || ||| ||| ||||| ||||| | | || || | |||||||| | | Sbjct 48336 TACCACCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCCTCAA 48395 Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCA 107185 | || ||||| || ||| ||||||||| || | ||| || || ||||| ||| Sbjct 48396 TGCTATCGTCCTTCATGTCGACGAGGAAGCAAGACGAGAGCTG-GGCCTGGGGTGTCCCA 48454 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATG 107243 ||||||||||| ||||| | || ||| |||| || ||| ||||| || ||| | Sbjct 48455 GCATTGAAGAGAGTTGGGGAAGCATGAGTGAA-GTA-TTTGCTAGACATGAGGTTGTAGG 48512 Query 107244 TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 ||| | ||| |||| || || || |||||||| ||||||||||| | ||| | Sbjct 48513 TCTGAATGACCTTCTCAACATCGTCGCCCCAGATGCCGACAGCCACACGCATGATCATAT 48572 Query 107304 ATTGGGGTGTTTCCATGA 107321 || ||| | |||| || Sbjct 48573 GCTGTGGTCTCTCCACGA 48590 >seq19 Length=350955 Score = 102 bits (112), Expect = 1e-16 Identities = 143/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| ||||||||||| || || || ||||| || |||||| || || ||||||||||| Sbjct 189843 GTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCAGACCGGGCATGAGACC 189784 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | ||| | || ||||||||||||||| ||| Sbjct 189783 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCACTGAAGAAGATACCCTCAACAGC 189724 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACT--TTGT-GTCAAACCATTTCAT 117461 || || |||| ||| || | |||||||| | |||| |||| | ||| ||| | || Sbjct 189723 GGCGAAGGCAATAAGACGTTGGGCGAAGGTG---GACTTCTTGTCGGCAATCCAGTGCAG 189667 Query 117462 TGCCCATTTCGCCTTCTT 117479 ||||| | |||||||| Sbjct 189666 GGCCCAGTCGGCCTTCTT 189649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977075746200