Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq122 248 1e-60
seq19 102 1e-16
>seq122
Length=136518
Score = 248 bits (274), Expect = 1e-60
Identities = 1129/1758 (64%), Gaps = 49/1758 (3%)
Strand=Plus/Plus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
||||| |||||||| || ||||| || || | ||||| || | |||||| | |
Sbjct 46856 CGGAGGTAGTACATGCCAGTCTTCAGGCCAAGCTTCCAGCCGGTGAAATGCATGCTGGTG 46915
Query 105650 AGCTTGGACATCGTTGGACTTTCC--ATGAAAAGATTCATACTTTGACTCTGGTCAATGA 105707
| |||| ||| || || || || ||| | ||| | ||| |||||||||||
Sbjct 46916 ATCTTGCCCATAGTGGG--TTCCCTCATGTGGATATTTAGTGATTGGGACTGGTCAATGA 46973
Query 105708 AGCGACCACGTTGTGCCGCCATATCAATGACATCC-TTCATCTTGAT--TTCCCACACTG 105764
| |||||| | || ||||| | |||| | ||| | ||| |||||| || |
Sbjct 46974 ACGCACCACGGTCAGCGGCCATCTG---GACAACGGTTCGTTGGGATATTTCCCAGACGG 47030
Query 105765 TGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCG 105824
| ||| ||| |||||||||| | || || | | ||| || ||||||||||| |||
Sbjct 47031 TCTTGTAAAGAGCCTTGATATCAGCAGGAATGTTGGGGATGTTCTGAATTGAACCGCCCT 47090
Query 105825 CCTTGACCATGAGA---TCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCAT 105881
| | | |||| | | |||||| | ||||| ||||| || | || || |
Sbjct 47091 C---GGCAATGATACGGTTCTTCATGCTATCAGACCAGAGACCCATGTCAACAAGGTCCT 47147
Query 105882 TGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATG 105940
||| | ||| || | | ||||| || |||||| | | ||| ||||||
Sbjct 47148 TGAGCAACCAGGGGTTAACGACCTGGAACTCGCCAGCGAGGACACGGCG-AGAGTAGATG 47206
Query 105941 TTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTT 106000
|| | ||||| || || ||||| ||||| ||||||||||| || | ||| ||| ||
Sbjct 47207 TTGGAAGTGTAAGGCTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTGCTGGCCGTG 47266
Query 106001 GGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGA 106060
||||| || || | ||| | ||||| || | ||| |||| |||||| | ||||||||
Sbjct 47267 GGCATGGGGGCGACCAACAAGCTGTTGCGCACACCATTTTGCTTGATTTGCTCCTTGAGG 47326
Query 106061 ACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATATCAAATTGAAGCACCC 106118
|||||| | || | ||| | || |||| |||| || ||||||| | |
Sbjct 47327 CTGGTCCAGTCCCAAA-GATCCGATGGGGTGACATTCC-ACATGTCGTATTGAAGGATGC 47384
Query 106119 CTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCAC 106178
| || || |||||||||||| | || || | |||| | | | || | ||
Sbjct 47385 CCTGCGAGACGGGAGAACCCTCGTAGGTAGAGTAAGGGCCTTCGACCTTGGCAATCTCCG 47444
Query 106179 AGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGG 106238
| ||| || || || || || || || || ||||| | || | | | |
Sbjct 47445 TGGACGCAGTCAAGGCGGCATGGTAGATCGTCTCGAAGATCTGCTTGTTTAATTGTCTAG 47504
Query 106239 CTTCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACA 106297
| || ||| ||||| | | || || | | ||| ||| || ||||| ||||||
Sbjct 47505 CCTCTGGTGACTCAAAAGGCATA-CGCAATGCCAAGAATGTATCAGCAAGACCCTGAACA 47563
Query 106298 CCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAA 106356
|| | |||||| || | ||||||||| || || || || ||| ||||| ||| |
Sbjct 47564 CCAAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGGGCC-TCTGGGACGGGGTAATA 47622
Query 106357 ATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTT 106416
||| ||||| | || ||| | ||| | || | | || | ||||| | ||
Sbjct 47623 ATTGACATCAATAATTCTGTTCAAATTGTGAACGACGACTTGGGTAACCTCATGCAACTT 47682
Query 106417 TTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG----GCGATTGATG 106472
| | ||| |||||| || | || | || || ||| || |||| || |
Sbjct 47683 CTGGAAGTCATAAGTGCCT---TCGTTATAGTCA-ACAAAGGACGGCAACGCGAGGGAAG 47738
Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532
| || ||||| |||||| |||||| | | |||||| | || || || || | |
Sbjct 47739 CTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCAATGATCTCGGTGCAAAGAT 47798
Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592
| || || ||| || || | |||||| ||||||||||| |||||| ||||||||
Sbjct 47799 TCGAGCTGCGAATAGTACCAAGATTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGT 47858
Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCG 106651
| |||||| |||| | || ||||| ||||| | || |||||| || | ||||| | ||
Sbjct 47859 AAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACAGCTTCT 47918
Query 106652 GCGGCTGGTACAA-TGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTC 106710
| | || | ||||| | | || ||||| || |||||||| ||| ||||| ||
Sbjct 47919 GAGCCTTAATCTTCTGGCG--GCCGCGACCCTCTGCTTCGTACTTCTCGTACAGGGCCTC 47976
Query 106711 AAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCA 106770
||||| || || |||| | ||||| || || || ||||| | || | |||
Sbjct 47977 GAACTCATCGCCATAAACGTCAGCTAGACCAGGGCACTCGTTAGGACACATGAGGGTCCA 48036
Query 106771 TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 106830
| ||| || |||||| || |||||||| || || |||||||| || | |||||
Sbjct 48037 CTCTCCATTCTTCTCAACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCCAGGAAGAG 48096
Query 106831 ATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 106890
||| | ||| | || || | || ||||| ||| | ||||||||||| | |
Sbjct 48097 ATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTCGAAAAC 48156
Query 106891 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTT 106946
||||| |||||| ||||| || |||| |||| || || || | | | ||| | |
Sbjct 48157 ATCCGAGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCAGGTCTCTTGTTG-CCACCCT 48215
Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006
||| ||| || | || ||| || || || || ||||| || | ||| || | ||
Sbjct 48216 GATCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGGTACAATGCCGTTCGAGG 48275
Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 107066
|| || || || ||| || | | || | | ||||||| | ||||
Sbjct 48276 TGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCGGTGGATGTTGAGACCAA 48335
Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126
|||| || ||| ||| ||||| ||||| | | || || | |||||||| | |
Sbjct 48336 TACCACCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCCTCAA 48395
Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCA 107185
| || ||||| || ||| ||||||||| || | ||| || || ||||| |||
Sbjct 48396 TGCTATCGTCCTTCATGTCGACGAGGAAGCAAGACGAGAGCTG-GGCCTGGGGTGTCCCA 48454
Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATG 107243
||||||||||| ||||| | || ||| |||| || ||| ||||| || ||| |
Sbjct 48455 GCATTGAAGAGAGTTGGGGAAGCATGAGTGAA-GTA-TTTGCTAGACATGAGGTTGTAGG 48512
Query 107244 TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303
||| | ||| |||| || || || |||||||| ||||||||||| | ||| |
Sbjct 48513 TCTGAATGACCTTCTCAACATCGTCGCCCCAGATGCCGACAGCCACACGCATGATCATAT 48572
Query 107304 ATTGGGGTGTTTCCATGA 107321
|| ||| | |||| ||
Sbjct 48573 GCTGTGGTCTCTCCACGA 48590
>seq19
Length=350955
Score = 102 bits (112), Expect = 1e-16
Identities = 143/198 (72%), Gaps = 6/198 (3%)
Strand=Plus/Minus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
||| ||||||||||| || || || ||||| || |||||| || || |||||||||||
Sbjct 189843 GTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCAGACCGGGCATGAGACC 189784
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
|||||||| | ||| | || | ||| | || ||||||||||||||| |||
Sbjct 189783 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCACTGAAGAAGATACCCTCAACAGC 189724
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACT--TTGT-GTCAAACCATTTCAT 117461
|| || |||| ||| || | |||||||| | |||| |||| | ||| ||| | ||
Sbjct 189723 GGCGAAGGCAATAAGACGTTGGGCGAAGGTG---GACTTCTTGTCGGCAATCCAGTGCAG 189667
Query 117462 TGCCCATTTCGCCTTCTT 117479
||||| | ||||||||
Sbjct 189666 GGCCCAGTCGGCCTTCTT 189649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589977075746200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |