Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3 102 9e-17 >seq3 Length=506345 Score = 102 bits (112), Expect = 9e-17 Identities = 193/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 153732 GGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 153791 || || ||||| ||| ||||| | || ||| |||||| |||||| | || |||||| Sbjct 416735 GGAGAATGGGGTGCTGACATTGCGTTCGGAAGTGCGCAAAGATTTGGTGTGCCGATGGGA 416794 Query 153792 TATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 153851 | || || || ||||| || || || || || ||| | ||||| ||||| || Sbjct 416795 TTCGGGGGACCACATGCCGCCTTTTTCGCCGTCCAGGAGAAGCACAAGAGGAAGATGCCC 416854 Query 153852 GGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTA 153911 || || | || || ||| ||| | |||| |||||| ||| || |||| ||| Sbjct 416855 GGACGATTGGTTGGCTTGTCTAAGGATCGACTAGGTGGTAAAGCGTACCGACTAGCTCTA 416914 Query 153912 CAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAG 153971 ||||| || || || || || | ||||| ||||||||||| ||| |||| || | || Sbjct 416915 CAGACAAGGGAACAACACATTCGCAGAGAGAAAGCAACCAGCAACGTCTGTACTTCGCAA 416974 Query 153972 GCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGG 154015 || || |||| || ||| | |||||||| || ||||| Sbjct 416975 GCGTTGTTGGCGAACATGAACGCCCTCTATGCAATCTACCATGG 417018 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 153210 GGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAAT 153269 || ||||||||||| |||||| || || | ||||| || ||||| || || ||||| Sbjct 416183 GGCCAAGGATACTACGGAACCCACACTCCAGCCGTCATCCAACGAAATGTACTCGAGAAC 416242 Query 153270 CCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAA 153329 || |||||||| ||||| || || ||| | || || ||| || | |||||| Sbjct 416243 CCGGCATGGTACACGAGCTACACCCCTTACCAACCAGAAATCAGTCAAGGCCGCTTGGAA 416302 Query 153330 GCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCA 153389 | || |||| | ||| || | | ||||| ||||| | | || ||||| || || Sbjct 416303 TCCTTGCTCAACTTCCAGACTATGGTTACAGACCTTACCGCGCTTCCCATAGCCAATGCC 416362 Query 153390 TCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 ||| ||||||||| ||||| || || || || ||| Sbjct 416363 AGTCTTCTAGATGAAGGCACTGCTGCTGCCGAGGCCATG 416401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579209143719200