Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 9e-17
>seq3
Length=506345
Score = 102 bits (112), Expect = 9e-17
Identities = 193/284 (68%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 153732 GGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 153791
|| || ||||| ||| ||||| | || ||| |||||| |||||| | || ||||||
Sbjct 416735 GGAGAATGGGGTGCTGACATTGCGTTCGGAAGTGCGCAAAGATTTGGTGTGCCGATGGGA 416794
Query 153792 TATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 153851
| || || || ||||| || || || || || ||| | ||||| ||||| ||
Sbjct 416795 TTCGGGGGACCACATGCCGCCTTTTTCGCCGTCCAGGAGAAGCACAAGAGGAAGATGCCC 416854
Query 153852 GGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTA 153911
|| || | || || ||| ||| | |||| |||||| ||| || |||| |||
Sbjct 416855 GGACGATTGGTTGGCTTGTCTAAGGATCGACTAGGTGGTAAAGCGTACCGACTAGCTCTA 416914
Query 153912 CAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAG 153971
||||| || || || || || | ||||| ||||||||||| ||| |||| || | ||
Sbjct 416915 CAGACAAGGGAACAACACATTCGCAGAGAGAAAGCAACCAGCAACGTCTGTACTTCGCAA 416974
Query 153972 GCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGG 154015
|| || |||| || ||| | |||||||| || |||||
Sbjct 416975 GCGTTGTTGGCGAACATGAACGCCCTCTATGCAATCTACCATGG 417018
Score = 84.2 bits (92), Expect = 3e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 153210 GGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAAT 153269
|| ||||||||||| |||||| || || | ||||| || ||||| || || |||||
Sbjct 416183 GGCCAAGGATACTACGGAACCCACACTCCAGCCGTCATCCAACGAAATGTACTCGAGAAC 416242
Query 153270 CCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAA 153329
|| |||||||| ||||| || || ||| | || || ||| || | ||||||
Sbjct 416243 CCGGCATGGTACACGAGCTACACCCCTTACCAACCAGAAATCAGTCAAGGCCGCTTGGAA 416302
Query 153330 GCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCA 153389
| || |||| | ||| || | | ||||| ||||| | | || ||||| || ||
Sbjct 416303 TCCTTGCTCAACTTCCAGACTATGGTTACAGACCTTACCGCGCTTCCCATAGCCAATGCC 416362
Query 153390 TCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428
||| ||||||||| ||||| || || || || |||
Sbjct 416363 AGTCTTCTAGATGAAGGCACTGCTGCTGCCGAGGCCATG 416401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579209143719200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |