Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 4e-21
>seq3
Length=506345
Score = 116 bits (128), Expect = 4e-21
Identities = 196/284 (69%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 158407 GGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 158466
|| || ||||| ||||||||| | || ||| |||||| |||||| | || ||||||
Sbjct 416735 GGAGAATGGGGTGCTGACATTGCGTTCGGAAGTGCGCAAAGATTTGGTGTGCCGATGGGA 416794
Query 158467 TACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 158526
| ||| || || ||||| || || || || || ||| | ||||| ||||| ||
Sbjct 416795 TTCGGGGGACCACATGCCGCCTTTTTCGCCGTCCAGGAGAAGCACAAGAGGAAGATGCCC 416854
Query 158527 GGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTA 158586
|| || | || || ||| ||| | |||| |||||| ||| || |||| |||
Sbjct 416855 GGACGATTGGTTGGCTTGTCTAAGGATCGACTAGGTGGTAAAGCGTACCGACTAGCTCTA 416914
Query 158587 CAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAA 158646
||||| || || || || || | ||||| ||||||||||| ||| |||| || | |||
Sbjct 416915 CAGACAAGGGAACAACACATTCGCAGAGAGAAAGCAACCAGCAACGTCTGTACTTCGCAA 416974
Query 158647 GCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGG 158690
|| || |||| || ||| | |||||||| || |||||
Sbjct 416975 GCGTTGTTGGCGAACATGAACGCCCTCTATGCAATCTACCATGG 417018
Score = 89.7 bits (98), Expect = 6e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 157885 GGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAAT 157944
|| ||||||||||| |||||| ||| || | ||||| || ||||| || || |||||
Sbjct 416183 GGCCAAGGATACTACGGAACCCACACTCCAGCCGTCATCCAACGAAATGTACTCGAGAAC 416242
Query 157945 CCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAA 158004
|| |||||||| ||||| || || ||| | || || ||| || | ||||||
Sbjct 416243 CCGGCATGGTACACGAGCTACACCCCTTACCAACCAGAAATCAGTCAAGGCCGCTTGGAA 416302
Query 158005 GCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCA 158064
| || |||| | ||| || | | ||||| || || | || || ||||| || ||
Sbjct 416303 TCCTTGCTCAACTTCCAGACTATGGTTACAGACCTTACCGCGCTTCCCATAGCCAATGCC 416362
Query 158065 TCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
||| ||||||||| ||||| || || || || |||
Sbjct 416363 AGTCTTCTAGATGAAGGCACTGCTGCTGCCGAGGCCATG 416401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588047487926800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |