Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq30 105 5e-17 >seq30 Length=286403 Score = 105 bits (116), Expect = 5e-17 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || || || |||||||| || ||||||||||| || ||||| || | || Sbjct 267016 ACTGTGCCCGCCTACTTCAATGACTCTCAGCGTCAAGCTACCAAGGATGCCGGTCAGATC 266957 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| ||||| || |||||| || | || || || |||||||| |||||||| ||||| Sbjct 266956 GCTGGTCTTAACGTCCTTCGTGTTGTGAACGAGCCCACTGCTGCAGCACTTGCGTATGGT 266897 Query 550529 CTTGATAA 550536 || || || Sbjct 266896 CTGGAGAA 266889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029269293322450