Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq30 105 5e-17
>seq30
Length=286403
Score = 105 bits (116), Expect = 5e-17
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| || || || || |||||||| || ||||||||||| || ||||| || | ||
Sbjct 267016 ACTGTGCCCGCCTACTTCAATGACTCTCAGCGTCAAGCTACCAAGGATGCCGGTCAGATC 266957
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
||||| ||||| || |||||| || | || || || |||||||| |||||||| |||||
Sbjct 266956 GCTGGTCTTAACGTCCTTCGTGTTGTGAACGAGCCCACTGCTGCAGCACTTGCGTATGGT 266897
Query 550529 CTTGATAA 550536
|| || ||
Sbjct 266896 CTGGAGAA 266889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029269293322450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |