Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq112 93.3 3e-14 >seq112 Length=148559 Score = 93.3 bits (102), Expect = 3e-14 Identities = 185/274 (68%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067 |||||||||| || || |||| || ||| || |||||||| ||| | | ||| | Sbjct 93132 TGTGGCACGGCGGGAGCACCATCTTCTTCAGGTCCTTCGGGTTCCACGCGGAAAGGATCA 93073 Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCC 30127 |||| | || | |||||||||| | || | | ||| |||||| || | Sbjct 93072 TGCGGCGATCGTACGGGTTGTTCCGCAGCTTGTGTATGACGTCGGCCAGCTGGTCGTAAC 93013 Query 30128 CCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGA 30187 || || | |||||||| | || || ||||| || |||||||| | |||||||| Sbjct 93012 CCTGGCCGGTGTAGTCTGTCTTCGCATCGACATACTCAGCGCCGAAATGGCGCCACTGGA 92953 Query 30188 ACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAA 30247 | ||||| ||||| |||||||| || | || | || | | ||| ||||| | | Sbjct 92952 AGCCGTAAACCGGACCCAGGTCGCCGACCTCGCGGTCCGTCAGTCCCAAGTTGTCGAGGA 92893 Query 30248 AGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30281 | || | ||| || ||| ||||||||||||| || Sbjct 92892 ACTCGCGGGATCCATTGCCGTCCCAGATCTTGAC 92859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615085086365