Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq19 264 2e-65 seq122 199 7e-46 >seq19 Length=350955 Score = 264 bits (292), Expect = 2e-65 Identities = 508/741 (69%), Gaps = 35/741 (5%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || ||| ||||||||||| Sbjct 190146 CTGGTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTC 190087 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTC--AGGCCCATCTGTTC 47952 ||||||| ||||||||||| | | |||||| ||| | ||| ||| | Sbjct 190086 CATGAAGTCGAAGGGGTTGGTGGAGCGGTACACCTTCTCGTTGCCGAGGGCCA------C 190033 Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||||| | || |||||| |||||||||| | ||||||| || ||||||||||| Sbjct 190032 CAGCAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCTAG 189973 Query 48013 GAGGGACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCA 48071 |||| ||| ||||| ||||| || || ||||||| ||| || ||||| || | Sbjct 189972 TAGGG-CACAGGGCAGAGCCTCCGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGA 189914 Query 48072 CAATCTGCTTAACGCGGGACT---CTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCA 48128 |||| || || | || | | | | |||||| ||||| || | |||| Sbjct 189913 TGATCTTCTCGACCACGTCCTTGCCGGGGCGGTTGTTG---AGGTG---GGAGAACAGCA 189860 Query 48129 TGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGA 48188 |||||| ||||| |||||| || || || || |||||| ||||||||||| | Sbjct 189859 GGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCA 189800 Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGA 48248 |||| ||||||| || | || ||||||||||| || | ||||| | ||| ||||| Sbjct 189799 GACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCACTGAAGA 189740 Query 48249 AGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG 48308 |||| ||||| || || ||||| || | || | | |||| | | |||||||| | Sbjct 189739 AGATACCCTCAACAGCGGCGAAGGCAATAAGACGTTGGGCGAAGGTGGACTTCTTGTCGG 189680 Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368 |||||| || |||||||| |||||||| |||||| || || ||||| ||||| Sbjct 189679 CAATCCAGTGCAGGGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCTCAATGGCAT 189620 Query 48369 GGAAGAGCT---TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTG 48422 |||||| | |||| || | | ||| | ||||| | |||| || | Sbjct 189619 TGAAGAGATGTGTCTT---CTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGAG---GG 189566 Query 48423 CGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCT 48482 ||| |||| ||||| | ||||| || ||||||||| ||||||||| | ||||| Sbjct 189565 AGTAAGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCT 189506 Query 48483 CAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542 | | ||| || || ||||||| ||| | || ||||| ||||| || || || | Sbjct 189505 CTGGGATCTGGACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCAG 189446 Query 48543 AAGCAGCAAAGAAGGCAAGGA 48563 | || || |||||||| |||| Sbjct 189445 ATGCGGCGAAGAAGGCGAGGA 189425 >seq122 Length=136518 Score = 199 bits (220), Expect = 7e-46 Identities = 1105/1743 (63%), Gaps = 70/1743 (4%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || |||||||||| | || || || ||||||||||| ||||| Sbjct 46820 ACAGTGAACTGGATAGGTGCAGCAGCAGCTTGTGTACGGAGGTAGTACATGCCAGTCTTC 46879 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 ||||| ||| ||||||| | ||||| |||| ||| |||| | ||| | Sbjct 46880 AGGCCAAGCTT---CCAGCCGGTGAAATGCAT-GCTGGTGA---TCTTGCCC---ATAGT 46929 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 | || |||| || || | || || || || |||||| ||||| | | Sbjct 46930 GGGTTC--CCTCATG-------TGGATATTTAGTGATTGGGACTGGTCAATGAACGCACC 46980 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | |||||||||||| | | | || ||||| | ||||| ||||||||| | | Sbjct 46981 ACGGTCAGCGGCCATCTGGACAACGGTTCGTTGGGATATTTCCCAGACGGTCTTGTAAAG 47040 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC--CCTGTGTA-TGGT 212845 | |||| || | || | | |||||||||||| | || || ||| | | || | Sbjct 47041 AGCCTTGATATCAGCAGGAATGTTGGGGATGTTCTGAATTGAACCGCCCTCGGCAATGAT 47100 Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905 | | | |||| || |||||| ||| || | ||| ||||| || Sbjct 47101 ACGGTTCTT---CATGCTATCAGACCAGAGACCCATGTCAACAAGGTCCTTGAGCAACCA 47157 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 ||||| || | |||||| || || | ||| || | | ||| | ||| |||||||| Sbjct 47158 GGGGTTAACGACCTGGAACTCGCCAGCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTA 47217 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 ||||||| || ||| ||||| |||| ||||| | |||||||| ||||||||||| || Sbjct 47218 AGGCTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGC 47277 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC--GAAGCTCTGCCCAG 213083 |||| | ||||| | ||| || | | ||| | | || || ||| | |||| Sbjct 47278 GACCAACAAGCTGTTGCGCACACCATTTTGCTTGATTTG-CTCCTTGAGGCTG-GTCCAG 47335 Query 213084 TCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCT 213143 ||||| | || || | || ||||||||||| | || | |||||| Sbjct 47336 TCCCAAAGATCCGATGGGG---------TGACATTCCACATGTCGTATTGAAGGATGCCC 47386 Query 213144 TTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203 | ||||| |||| ||| | ||||| ||||| | ||||||| | ||| | Sbjct 47387 TGCGAGACGGGAGAACCCTCGTAGGTAGAGTAAGGGCCTTCGACCTTGGCAATCTCCGTG 47446 Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263 ||||| || ||| || | |||||| || || || |||| | |||| | | | ||| Sbjct 47447 GACGCAGTCAAGGCGGCATGGTAGATCGTCTCGAAGATCTGCTTGTTTAATTGTCTAGCC 47506 Query 213264 TCTGGGGACGTGAAGGGCATCATCA-TGCGTTGGAACACATCAGCCAGCCCCTGGACCCC 213322 ||||| ||| || ||||| || ||| | || |||||| || ||||| || || Sbjct 47507 TCTGGTGACTCAAAAGGCATACGCAATGCCAAG-AATGTATCAGCAAGACCCTGAACACC 47565 Query 213323 GATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTT 213382 | || ||||| | ||||| || ||| || | ||| | ||||||| | || Sbjct 47566 AAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGGGCCTCTGGGACGGGGTAATAATT 47625 Query 213383 GCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTC 213442 | || || || |||| | ||| | | | |||| ||| || | || ||| Sbjct 47626 GACATCAATAATTCTGTTCAAATTGTGAACGACGACTTGGGTAACCTCATGCA---ACTT 47682 Query 213443 GTGATTGAACACGTA---GCCCCCGTCCTGC---ACAAACTCAGGCAGGGCGATGCTGGC 213496 || ||| | || ||| ||| | ||||| |||| |||| | || Sbjct 47683 CTG---GAAGTCATAAGTGCCTTCGTTATAGTCAACAAAGGACGGCAACGCGAGGGAAGC 47739 Query 213497 CAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTT 213556 | |||||| || |||||||| | || | | | |||||| |||||||||||||| || || Sbjct 47740 TAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCAATGATCTCGGTGCAAAGATT 47799 Query 213557 GCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACT-TTGCGTTGGCAGA-ATCCTTG 213614 || || || || || || |||| ||||| ||| ||||| | |||| ||||||| Sbjct 47800 CGAGCTGCGAATAGTACCAAGATTCTTCTGGTT--ACTCTTGCGGTTGCAGTGATCCTTG 47857 Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTAC 213674 || |||||| |||| || ||||| ||| | | | || || | ||| || | | Sbjct 47858 TAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACAGCTTC 47917 Query 213675 CTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTA-GCCTCGTACTGTTCGTAGAGCTC 213733 ||||| | | | || | || || | | || ||||||| ||||| || | Sbjct 47918 TGAGCCTTAATCTTC----TGGCGGCCGCGACCCTCTGCTTCGTACTTCTCGTACAGGGC 47973 Query 213734 GTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCT 213793 | ||| || | ||| | || | || || || || |||||||||||| | Sbjct 47974 CTCGAACTCATCGCCATAAACGTCAGCTAGACCAGGGCACTCGTTAGGACACATGAGGGT 48033 Query 213794 CCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852 ||| || || | | |||| || | | |||||| || || || | ||| || || || Sbjct 48034 CCACTCTCCATTCTTCTCA-ACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCCAGGA 48092 Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912 | || || | || | || ||| ||| ||| || || ||||| || || || | Sbjct 48093 AGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTCGA 48152 Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGC 213969 | | |||| |||||| ||||| | ||||||||| || || || || |||||| || | Sbjct 48153 AAACATCCGAGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCAGGTCTCTTGTTGCCAC 48212 Query 213970 CCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG 214029 |||| || || || || | ||||||| || || | |||||| | ||||| | Sbjct 48213 CCTGATCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGGTACAATGCCGTTCG 48272 Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCC 214089 | ||||| || || || || || ||||| | || | | | | ||| ||| | Sbjct 48273 AGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCGGTGGATGTTGAGAC 48332 Query 214090 CTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGG 214149 | || |||||||| ||||||||||||||| || | | | || || ||| || Sbjct 48333 CAATACCACCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCCT 48392 Query 214150 CCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGC 214209 | ||||| || || | | || | | |||||| ||||||||||| | || | | Sbjct 48393 CAATGCTATCGTCCTTCATGTCGACGAGGAAGCAAGACGAGAGCTGGGCCTGGGGTGTCC 48452 Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGG 214269 ||| ||||| || || ||| ||||| | | | ||| |||| | ||| |||||| Sbjct 48453 CAGCATTGAAGAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAGACATGAGGTTGTAGG 48512 Query 214270 TCT 214272 ||| Sbjct 48513 TCT 48515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931526919699200