Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq19 183 6e-41 seq122 163 5e-35 >seq19 Length=350955 Score = 183 bits (202), Expect = 6e-41 Identities = 562/860 (65%), Gaps = 30/860 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACT-CAAACTGGACCGCCGAAGAGATTGATCT 25535 || ||| |||||||||||||| | | || || | |||||||||||| ||||||||||| Sbjct 189301 ATCTGGCAGATGTACAAGAAG-CACGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCT 189359 Query 25536 GGCCAAGGACATGGACGGCTGGT---ACGCTCTATCCAAAGACGAGCAGCATT-TTC-TC 25590 ||||||| | ||| |||| || ||| | | |||||| | ||| ||| || Sbjct 189360 ATCCAAGGATCTCCACGACTGGAGCAACCGCCTAAACGATGACGAGAA--ATTCTTCATC 189417 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 || | | || ||||| || || ||||| || || || |||||||| || |||| Sbjct 189418 TCCCACATCCTCGCCTTCTTCGCCGCATCTGACGGCATTGTCAACGAGAACCTTGTCGAG 189477 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 ||||| | | || || ||| | |||||| || |||||||| |||||||| Sbjct 189478 CGATTCTCTGGCGAGGTCCAGATCCCAGAGGCCCGATGCTTCTACGGCTTCCAGATCATG 189537 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767 || || || | ||||| ||| || || || || || || ||||| | || Sbjct 189538 ATGGAGAACATCCACTCCGAGACTTACTCC---CTCCTCATTGACACCTACATCAAGGAG 189594 Query 25768 GTCGCCGAGAGAGAT-CGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 ||| ||| ||| | || || |||||| ||| ||| || ||||| | ||| Sbjct 189595 CCTGCCCAGA-AGACACATCTCTTCAATGCCATTGAGACCATTCCTTGCATCCGCAAGAA 189653 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGT 25886 ||| |||||| || | ||||| | | ||| | || || | | | || || | Sbjct 189654 GGCCGACTGGGCCCTGCACTGGATTGCCGACAAGAAGTCCACCTTCGCCCAACGTCTTAT 189713 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 ||||| || ||||| ||||| ||||| ||||| || | || || ||||||||||||| Sbjct 189714 TGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGAGCCTTCGCTTCCATCTTCTGGCT 189773 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 |||| || || ||||||||| ||| ||| |||||||| |||||| | || || Sbjct 189774 CAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAACTCATCTCGCGTGATGA 189833 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA--ACCT 26064 |||||| |||| || || ||||||||||| | | | |||| ||| |||| || Sbjct 189834 GGGTCTGCACACCGACTTCGCCTGCCTGCTGTTCTC---CCAC---CTCAACAACCGCCC 189887 Query 26065 TCTCAAGAGAC--CGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTC 26122 |||| ||| ||| | | ||||||| || || || || ||| ||||||| | Sbjct 189888 CGGCAAG-GACGTGGTCGAGAAGATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCC 189946 Query 26123 NNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACA 26182 | ||||||||| || ||||||| || |||| Sbjct 189947 TGACGGAGGCTCTGCCCTGTGCCCTACTAGGCATGAACGCCAACCTCATGAAGCAGTACA 190006 Query 26183 TTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACG 26241 | |||| || ||||||| ||||| ||| | || || || | | ||| | | Sbjct 190007 TCGAGTTCGTCGCCGACCGCCTGCTGGTGGC-CCTCGGCAACGAGAAGGTGTACCGCTCC 190065 Query 26242 CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAA 26301 | ||||| |||||||| ||||| ||||| || ||| || |||||||||||||| || Sbjct 190066 ACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAG 190125 Query 26302 AAGAGGGTCGGCGACTATCA 26321 ||| | || || || || || Sbjct 190126 AAGCGCGTTGGTGATTACCA 190145 >seq122 Length=136518 Score = 163 bits (180), Expect = 5e-35 Identities = 708/1098 (64%), Gaps = 55/1098 (5%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 |||| ||| || |||||||| ||||| |||||| |||||| | | | ||||| || Sbjct 47453 GTCAAGGCGGCATGGTAGATCGTCTCGAAGATCTGCTTGTTTAATTGTCTAGCCTCTGGT 47512 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGT--CGGCCAGTCCCTGTACTCCGATAC 221534 || || |||||||||| || || | || | || || ||||| || || | || Sbjct 47513 GACTCAAAAGGCATACGCA--ATGCCAAGAATGTATCAGCAAGACCCTGAACACCAAGAC 47570 Query 221535 CGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592 | ||||| | ||||| | ||||| | ||| || ||||| ||||| ||| | ||||| Sbjct 47571 CAATGGGACGGTGTCGCATGTTGCTGTTACGG--GCCTCTGGGACGGGGTAATAATTGAC 47628 Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652 || || | |||| | || || || ||||| ||||| || ||||||| Sbjct 47629 ATCAATAATTCTGTTCAAATTGTGAACGACGACTTGGGTAACCTCATGCAACTTCTGGAA 47688 Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712 | || || | ||| |||| | || ||||| | | |||||||| Sbjct 47689 GT----CAT-AAGT----GCCTTCGTTATAG---TCAACAAAGG-----ACGGCAACGCG 47731 Query 221713 GG-----CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTA 221767 | | | ||| || || |||||||| || | || |||| |||||||| || Sbjct 47732 AGGGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCAATGATCTCGGTG 47791 Query 221768 CAGAGGTT---GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCA 221824 || || || ||||| || || || || | || || ||| |||||| ||| || Sbjct 47792 CAAAGATTCGAGCTGCGA---ATAGTACCAAGATTCTTCTGGTTACTCTTGCGGTTG-CA 47847 Query 221825 GCG-TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTC 221883 | | |||||||| ||||| |||||| |||||||| ||||||| | ||||| || Sbjct 47848 GTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTA 47907 Query 221884 CCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATAC--CC 221940 ||| || | |||| || | | || | | || |||||| | ||| ||| | Sbjct 47908 CCACAGCT-TCTGAGCCTTAATCTTCTGGCGGCCGCGACCCTCTGC---TTCGTACTTCT 47963 Query 221941 GGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGG 222000 ||| || || | | |||| || || || | || | || || || ||| | || Sbjct 47964 CGTACAGGGCCT--CGAACTCATCGCCATAAACGTCAGCTAGACCAGGGCACTCGTTAGG 48021 Query 222001 ACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCA 222060 |||||| || |||| | || | | || | | ||||||||| || || ||||| Sbjct 48022 ACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTCATGAAGAGATCAGGAATCCA 48081 Query 222061 CAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATC 222120 || ||| | |||||||| | || || |||||| ||| | ||| || | ||||| Sbjct 48082 GAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATC 48141 Query 222121 CAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCG 222180 | ||||| |||| || | |||||| ||||| || |||| ||| | ||| || |||| Sbjct 48142 AAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCAGGTCT 48201 Query 222181 CTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTA 222239 |||||||||||||||||| || || | ||| | ||||||| || || | |||| Sbjct 48202 CTTGTTGCCACCCTGATCTACGTATCT-TGCAGTGTTATTGAAGACACGTAGCATGGGTA 48260 Query 222240 CCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC 222299 | | ||||| || ||||| ||||| |||||| | || || | || | | Sbjct 48261 CAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCAC---GGATGC 48317 Query 222300 --TGGCAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356 ||| | | || ||||||||||| || ||||||||||| || ||||||| | Sbjct 48318 GGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGG 48377 Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416 |||| ||| ||||| || || ||||| | || | || || |||||||| | || Sbjct 48378 TGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACGAGGAAGCAAGACGAGAGCT 48437 Query 222417 GAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAG 222476 | | | || | | || || || || || || || || || ||||| |||| Sbjct 48438 GGGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAG 48497 Query 222477 ACATCAGATCGTACGTCT 222494 |||| || | ||| |||| Sbjct 48498 ACATGAGGTTGTAGGTCT 48515 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | ||| || | | ||| | ||| |||||| | || Sbjct 47161 GTTAACGACCTGGAACTCGCCAGCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGG 47220 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||| ||||| |||| |||||| | |||||||| ||||||||||| || || Sbjct 47221 CTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGAC 47280 Query 221236 CAGCAGACTGTTGCGCA 221252 || || |||||||||| Sbjct 47281 CAACAAGCTGTTGCGCA 47297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928838936667200