Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq19 183 6e-41
seq122 163 5e-35
>seq19
Length=350955
Score = 183 bits (202), Expect = 6e-41
Identities = 562/860 (65%), Gaps = 30/860 (3%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACT-CAAACTGGACCGCCGAAGAGATTGATCT 25535
|| ||| |||||||||||||| | | || || | |||||||||||| |||||||||||
Sbjct 189301 ATCTGGCAGATGTACAAGAAG-CACGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCT 189359
Query 25536 GGCCAAGGACATGGACGGCTGGT---ACGCTCTATCCAAAGACGAGCAGCATT-TTC-TC 25590
||||||| | ||| |||| || ||| | | |||||| | ||| ||| ||
Sbjct 189360 ATCCAAGGATCTCCACGACTGGAGCAACCGCCTAAACGATGACGAGAA--ATTCTTCATC 189417
Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650
|| | | || ||||| || || ||||| || || || |||||||| || ||||
Sbjct 189418 TCCCACATCCTCGCCTTCTTCGCCGCATCTGACGGCATTGTCAACGAGAACCTTGTCGAG 189477
Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710
||||| | | || || ||| | |||||| || |||||||| ||||||||
Sbjct 189478 CGATTCTCTGGCGAGGTCCAGATCCCAGAGGCCCGATGCTTCTACGGCTTCCAGATCATG 189537
Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767
|| || || | ||||| ||| || || || || || || ||||| | ||
Sbjct 189538 ATGGAGAACATCCACTCCGAGACTTACTCC---CTCCTCATTGACACCTACATCAAGGAG 189594
Query 25768 GTCGCCGAGAGAGAT-CGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826
||| ||| ||| | || || |||||| ||| ||| || ||||| | |||
Sbjct 189595 CCTGCCCAGA-AGACACATCTCTTCAATGCCATTGAGACCATTCCTTGCATCCGCAAGAA 189653
Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGT 25886
||| |||||| || | ||||| | | ||| | || || | | | || || |
Sbjct 189654 GGCCGACTGGGCCCTGCACTGGATTGCCGACAAGAAGTCCACCTTCGCCCAACGTCTTAT 189713
Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946
||||| || ||||| ||||| ||||| ||||| || | || || |||||||||||||
Sbjct 189714 TGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGAGCCTTCGCTTCCATCTTCTGGCT 189773
Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006
|||| || || ||||||||| ||| ||| |||||||| |||||| | || ||
Sbjct 189774 CAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAACTCATCTCGCGTGATGA 189833
Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA--ACCT 26064
|||||| |||| || || ||||||||||| | | | |||| ||| |||| ||
Sbjct 189834 GGGTCTGCACACCGACTTCGCCTGCCTGCTGTTCTC---CCAC---CTCAACAACCGCCC 189887
Query 26065 TCTCAAGAGAC--CGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTC 26122
|||| ||| ||| | | ||||||| || || || || ||| ||||||| |
Sbjct 189888 CGGCAAG-GACGTGGTCGAGAAGATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCC 189946
Query 26123 NNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACA 26182
| ||||||||| || ||||||| || ||||
Sbjct 189947 TGACGGAGGCTCTGCCCTGTGCCCTACTAGGCATGAACGCCAACCTCATGAAGCAGTACA 190006
Query 26183 TTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACG 26241
| |||| || ||||||| ||||| ||| | || || || | | ||| | |
Sbjct 190007 TCGAGTTCGTCGCCGACCGCCTGCTGGTGGC-CCTCGGCAACGAGAAGGTGTACCGCTCC 190065
Query 26242 CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAA 26301
| ||||| |||||||| ||||| ||||| || ||| || |||||||||||||| ||
Sbjct 190066 ACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAG 190125
Query 26302 AAGAGGGTCGGCGACTATCA 26321
||| | || || || || ||
Sbjct 190126 AAGCGCGTTGGTGATTACCA 190145
>seq122
Length=136518
Score = 163 bits (180), Expect = 5e-35
Identities = 708/1098 (64%), Gaps = 55/1098 (5%)
Strand=Plus/Plus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476
|||| ||| || |||||||| ||||| |||||| |||||| | | | ||||| ||
Sbjct 47453 GTCAAGGCGGCATGGTAGATCGTCTCGAAGATCTGCTTGTTTAATTGTCTAGCCTCTGGT 47512
Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGT--CGGCCAGTCCCTGTACTCCGATAC 221534
|| || |||||||||| || || | || | || || ||||| || || | ||
Sbjct 47513 GACTCAAAAGGCATACGCA--ATGCCAAGAATGTATCAGCAAGACCCTGAACACCAAGAC 47570
Query 221535 CGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592
| ||||| | ||||| | ||||| | ||| || ||||| ||||| ||| | |||||
Sbjct 47571 CAATGGGACGGTGTCGCATGTTGCTGTTACGG--GCCTCTGGGACGGGGTAATAATTGAC 47628
Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652
|| || | |||| | || || || ||||| ||||| || |||||||
Sbjct 47629 ATCAATAATTCTGTTCAAATTGTGAACGACGACTTGGGTAACCTCATGCAACTTCTGGAA 47688
Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712
| || || | ||| |||| | || ||||| | | ||||||||
Sbjct 47689 GT----CAT-AAGT----GCCTTCGTTATAG---TCAACAAAGG-----ACGGCAACGCG 47731
Query 221713 GG-----CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTA 221767
| | | ||| || || |||||||| || | || |||| |||||||| ||
Sbjct 47732 AGGGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCAATGATCTCGGTG 47791
Query 221768 CAGAGGTT---GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCA 221824
|| || || ||||| || || || || | || || ||| |||||| ||| ||
Sbjct 47792 CAAAGATTCGAGCTGCGA---ATAGTACCAAGATTCTTCTGGTTACTCTTGCGGTTG-CA 47847
Query 221825 GCG-TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTC 221883
| | |||||||| ||||| |||||| |||||||| ||||||| | ||||| ||
Sbjct 47848 GTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTA 47907
Query 221884 CCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATAC--CC 221940
||| || | |||| || | | || | | || |||||| | ||| ||| |
Sbjct 47908 CCACAGCT-TCTGAGCCTTAATCTTCTGGCGGCCGCGACCCTCTGC---TTCGTACTTCT 47963
Query 221941 GGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGG 222000
||| || || | | |||| || || || | || | || || || ||| | ||
Sbjct 47964 CGTACAGGGCCT--CGAACTCATCGCCATAAACGTCAGCTAGACCAGGGCACTCGTTAGG 48021
Query 222001 ACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCA 222060
|||||| || |||| | || | | || | | ||||||||| || || |||||
Sbjct 48022 ACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTCATGAAGAGATCAGGAATCCA 48081
Query 222061 CAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATC 222120
|| ||| | |||||||| | || || |||||| ||| | ||| || | |||||
Sbjct 48082 GAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATC 48141
Query 222121 CAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCG 222180
| ||||| |||| || | |||||| ||||| || |||| ||| | ||| || ||||
Sbjct 48142 AAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCAGGTCT 48201
Query 222181 CTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTA 222239
|||||||||||||||||| || || | ||| | ||||||| || || | ||||
Sbjct 48202 CTTGTTGCCACCCTGATCTACGTATCT-TGCAGTGTTATTGAAGACACGTAGCATGGGTA 48260
Query 222240 CCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC 222299
| | ||||| || ||||| ||||| |||||| | || || | || | |
Sbjct 48261 CAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCAC---GGATGC 48317
Query 222300 --TGGCAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356
||| | | || ||||||||||| || ||||||||||| || ||||||| |
Sbjct 48318 GGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGG 48377
Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416
|||| ||| ||||| || || ||||| | || | || || |||||||| | ||
Sbjct 48378 TGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACGAGGAAGCAAGACGAGAGCT 48437
Query 222417 GAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAG 222476
| | | || | | || || || || || || || || || ||||| ||||
Sbjct 48438 GGGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAG 48497
Query 222477 ACATCAGATCGTACGTCT 222494
|||| || | ||| ||||
Sbjct 48498 ACATGAGGTTGTAGGTCT 48515
Score = 89.7 bits (98), Expect = 1e-12
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | ||| || | | ||| | ||| |||||| | ||
Sbjct 47161 GTTAACGACCTGGAACTCGCCAGCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGG 47220
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || ||| ||||| |||| |||||| | |||||||| ||||||||||| || ||
Sbjct 47221 CTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGAC 47280
Query 221236 CAGCAGACTGTTGCGCA 221252
|| || ||||||||||
Sbjct 47281 CAACAAGCTGTTGCGCA 47297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928838936667200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |