Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq244 98.7 6e-15
>seq244
Length=60485
Score = 98.7 bits (108), Expect = 6e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| ||||| || || || || || || || || || || | |||||
Sbjct 25890 ACGCAGACGGAGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGT 25831
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| || || |||||||||||||| ||||| | || ||||| || |||||||| ||
Sbjct 25830 GCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCGGGAGGAATACC 25771
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
|||||||| || ||||| ||||| || || ||||| | | | |||||
Sbjct 25770 CTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCCGAGGATTCGACCTCAAG 25711
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || || ||||||||||| ||||| || ||
Sbjct 25710 AGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTG 25672
Score = 91.5 bits (100), Expect = 1e-12
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
|||||| || ||||| ||||| || || |||||||| ||||| |||||||| ||||||||
Sbjct 26571 ATCTTCCAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGGAATGCCTTCCTT 26512
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
||| |||||||| || || || || || || | | | ||| ||||||||
Sbjct 26511 GTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAGGGTAAT 26452
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| || || || | ||||| || ||||| ||
Sbjct 26451 AGTCTTTCCCGTCAATGTCTTGACAAAAATCTG 26419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268157538099740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |