Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 6e-13 >seq3 Length=506345 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| ||||| || || ||||| ||||||||| ||| || || ||||| || | | Sbjct 416401 CATGGCCTCGGCAGCAGCAGTGCCTTCATCTAGAAGACTGGCATTGGCTATGGGAAGCGC 416342 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||||| ||||| | | || ||| | |||| || | |||||| | || ||| || Sbjct 416341 GGTAAGGTCTGTAACCATAGTCTGGAAGTTGAGCAAGGATTCCAAGCGGCCTTGACTGAT 416282 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 || | ||| || || ||||| |||||||| || ||||| || || ||||| || Sbjct 416281 TTCTGGTTGGTAAGGGGTGTAGCTCGTGTACCATGCCGGGTTCTCGAGTACATTTCGTTG 416222 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACC 140077 ||||| | || || |||||| ||||||||||| || Sbjct 416221 GATGACGGCTGGAGTGTGGGTTCCGTAGTATCCTTGGCC 416183 Score = 89.7 bits (98), Expect = 6e-13 Identities = 190/284 (67%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 ||||| || |||||||| | ||| || || | || ||||| | || |||| | Sbjct 417018 CCATGGTAGATTGCATAGAGGGCGTTCATGTTCGCCAACAACGCTTGCGAAGTACAGACG 416959 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 || ||||||||||| ||||| | ||| || || || || || ||||| |||| || ||| Sbjct 416958 TTGCTGGTTGCTTTCTCTCTGCGAATGTGTTGTTCCCTTGTCTGTAGAGCTAGTCGGTAC 416899 Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451 || | ||| | ||| ||| || || | || || || ||||| ||||| Sbjct 416898 GCTTTACCACCTAGTCGATCCTTAGACAAGCCAACCAATCGTCCGGGCATCTTCCTCTTG 416839 Query 139452 TACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCA 139511 | ||| || || || || || ||||| || || ||| ||||||| || | |||| Sbjct 416838 TGCTTCTCCTGGACGGCGAAAAAGGCGGCATGTGGTCCCCCGAATCCCATCGGCACACCA 416779 Query 139512 AACCTTTGCATACTACCTACAGCAATATCAAATCCCCACTCACC 139555 || |||||| ||| || | ||||| ||| ||||| || || Sbjct 416778 AATCTTTGCGCACTTCCGAACGCAATGTCAGCACCCCATTCTCC 416735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578994745072600