Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq3 89.7 6e-13
>seq3
Length=506345
Score = 89.7 bits (98), Expect = 6e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| ||||| || || ||||| ||||||||| ||| || || ||||| || | |
Sbjct 416401 CATGGCCTCGGCAGCAGCAGTGCCTTCATCTAGAAGACTGGCATTGGCTATGGGAAGCGC 416342
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
||||| ||||| | | || ||| | |||| || | |||||| | || ||| ||
Sbjct 416341 GGTAAGGTCTGTAACCATAGTCTGGAAGTTGAGCAAGGATTCCAAGCGGCCTTGACTGAT 416282
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
|| | ||| || || ||||| |||||||| || ||||| || || ||||| ||
Sbjct 416281 TTCTGGTTGGTAAGGGGTGTAGCTCGTGTACCATGCCGGGTTCTCGAGTACATTTCGTTG 416222
Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACC 140077
||||| | || || |||||| ||||||||||| ||
Sbjct 416221 GATGACGGCTGGAGTGTGGGTTCCGTAGTATCCTTGGCC 416183
Score = 89.7 bits (98), Expect = 6e-13
Identities = 190/284 (67%), Gaps = 0/284 (0%)
Strand=Plus/Minus
Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331
||||| || |||||||| | ||| || || | || ||||| | || |||| |
Sbjct 417018 CCATGGTAGATTGCATAGAGGGCGTTCATGTTCGCCAACAACGCTTGCGAAGTACAGACG 416959
Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391
|| ||||||||||| ||||| | ||| || || || || || ||||| |||| || |||
Sbjct 416958 TTGCTGGTTGCTTTCTCTCTGCGAATGTGTTGTTCCCTTGTCTGTAGAGCTAGTCGGTAC 416899
Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451
|| | ||| | ||| ||| || || | || || || ||||| |||||
Sbjct 416898 GCTTTACCACCTAGTCGATCCTTAGACAAGCCAACCAATCGTCCGGGCATCTTCCTCTTG 416839
Query 139452 TACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCA 139511
| ||| || || || || || ||||| || || ||| ||||||| || | ||||
Sbjct 416838 TGCTTCTCCTGGACGGCGAAAAAGGCGGCATGTGGTCCCCCGAATCCCATCGGCACACCA 416779
Query 139512 AACCTTTGCATACTACCTACAGCAATATCAAATCCCCACTCACC 139555
|| |||||| ||| || | ||||| ||| ||||| || ||
Sbjct 416778 AATCTTTGCGCACTTCCGAACGCAATGTCAGCACCCCATTCTCC 416735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578994745072600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |