Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq122 212 7e-50 seq19 102 1e-16 seq60 93.3 5e-14 >seq122 Length=136518 Score = 212 bits (234), Expect = 7e-50 Identities = 1053/1650 (64%), Gaps = 49/1650 (3%) Strand=Plus/Minus Query 75201 TCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACA 75260 || |||| | |||||| | ||| ||||||| || || |||||||| || || || Sbjct 48590 TCGTGGAGAGACCACAGCATATGATCATGCGTGTGGCTGTCGGCATCTGGGGCGACGATG 48531 Query 75261 TTGATTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAAC 75318 |||| ||| | |||| ||| || ||||| ||| || |||| ||| || | Sbjct 48530 TTGAGAAGGTCATTCAGACCTACAACCTCATGTCTAGCAAA-TAC-TTCACTCATGCTTC 48473 Query 75319 ACCAACCCTCTTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCG 75377 ||||| |||||||||||||| ||||| || || ||| | || ||||||||| ||| Sbjct 48472 CCCAACTCTCTTCAATGCTGGGACACCCCAGGCC-CAGCTCTCGTCTTGCTTCCTCGTCG 48414 Query 75378 CCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCT 75437 || ||||| || || | |||||||| | || || | | ||||| |||| Sbjct 48413 ACATGAAGGACGATAGCATTGAGGGTATCTACGACACCCTCAAGACTTGTGCCATGATCT 48354 Query 75438 CAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA 75497 | ||| ||| || |||||||| | ||||||| | | || | | || | Sbjct 48353 CCAAGATGGCCGGTGGTATTGGTCTCAACATCCACCGCATCCGTGCTACTGGCTCATACA 48294 Query 75498 TTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCA 75557 || || || || || || | || ||| | || ||||| || || || || || Sbjct 48293 TTGCTGGCACTAACGGCACCTCGAACGGCATTGTACCCATGCTACGTGTCTTCAATAACA 48234 Query 75558 CAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGTCCAT-CGCGGTCTACTTG 75613 | || | || ||| |||| | | ||| | || ||| | | ||| ||||| | Sbjct 48233 CTGCAAGATACGTAGATCAGG-GTGGCAACAAGAGACCTGGTGCTTTCGCCATCTACCTC 48175 Query 75614 GAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAA 75673 || || ||||| | ||| | | ||||||||||| | ||| ||||| || | || Sbjct 48174 GAGCCTTGGCACTCGGATGTTTTCGAGTTCCTTGATCTTCGAAAGAACCATGGCAAGGAG 48115 Query 75674 GAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGG 75733 || | ||| | |||||||| | || |||||||| || || |||||||| || Sbjct 48114 GAAGTTCGTGCCCGCGATCTCTTCCTGGCTCTCTGGATTCCTGATCTCTTCATGAAACGT 48055 Query 75734 GTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC 75793 |||||| || ||| | ||| | || | ||||| || || || ||||| | ||| Sbjct 48054 GTTGAGAAGAATGGAGAGTGGACCCTCATGTGTCCTAACGAGTGCCCTGGTCTAGCTGAC 47995 Query 75794 GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAAT 75853 | || || ||||| || ||||| ||| ||||| |||| |||||| | | | Sbjct 47994 GTTTATGGCGATGAGTTCGAGGCCCTGTACGAGAAGTACGAAGCAGAGGGTCGCGGC--- 47938 Query 75854 GCGACTGTACC---AGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGAC 75909 || | | | || | | || | | ||| | || |||||| | | ||||| ||||| Sbjct 47937 -CGCCAGAAGATTAAGGCTCAGAAGCTGTGGTACGCCATTCTCGAGGCTCAGACTGAGAC 47879 Query 75910 TGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTT 75969 ||||| || | ||||||||||||||| || ||| ||||||||||| |||||| | Sbjct 47878 TGGAAATCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAATCT 47819 Query 75970 GGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGA 76029 || || || ||||| ||||||||||| || || | |||||| | | ||||| Sbjct 47818 TGGTACTATTCGCAGCTCGAATCTTTGCACCGAGATCATTGAGTACTCCGCCCCTGATGA 47759 Query 76030 GACGGCTGTTTGCAATTTGGCATCAATCGC----CCTTCCAAAGTATGTCAATGAAGAGA 76085 | |||||| ||||| || || || |||| || ||| || || | || | || Sbjct 47758 GGTGGCTGTCTGCAACTTAGCTTCCCTCGCGTTGCCGTCCTTTGT-TGACTATAACGA-- 47702 Query 76086 CTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAA 76145 |||||| ||| | | || | ||||| | || | | || | ||| | | Sbjct 47701 -AGGCACTTATGACTTCCAGAAGTTGCATGAGGTTACCCAAGTCGTCGTTCACAATTTGA 47643 Query 76146 ACCGAGTCATTGACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGA 76204 || || | ||||| |||| ||| ||||| ||| || || || || |||||| Sbjct 47642 ACAGAATTATTGATGTCAATTATTACCCCGTCCCAGA-GGCCCGTAACAGCAACATGCGA 47584 Query 76205 CACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTAC 76264 ||| | || |||||| | |||||||| ||||| || ||| ||| | | || || Sbjct 47583 CACCGTCCCATTGGTCTTGGTGTTCAGGGTCTTGCTGATACATTCTTGGCATTGCG-TAT 47525 Query 76265 G-CATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCA 76323 | | ||||| ||| || || | | | || | ||||| || || || || || Sbjct 47524 GCCTTTTGAGTCACCAGAGGCTAGACAATTAAACAAGCAGATCTTCGAGACGATCTACCA 47465 Query 76324 CGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383 || || || ||| || | || | | | |||| | || || | || Sbjct 47464 TGCCGCCTTGACTGCGTCCACGGAGATTGCCAAGGTCGAAGGCCCTTACTCTACCTACGA 47405 Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AG 76441 ||||||||||| || || || | ||||| | || |||| |||| || | ||| | Sbjct 47404 GGGTTCTCCCGTCTCGCAGGGCATCCTTCAATACGACATGT-GGAATGTCACCCCATCGG 47346 Query 76442 CTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 76501 || | |||||| |||||||| | |||||| | || ||| | || ||||| Sbjct 47345 ATC-TTTGGGACTGGACCAGCCTCAAGGAGCAAATCAAGCAAAATGGTGTGCGCAACAGC 47287 Query 76502 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 76561 | ||| | || || ||||| || ||| ||| | || ||||||||||| ||||| ||| Sbjct 47286 TTGTTGGTCGCCCCCATGCCCACGGCCAGCACATCCCAGATCTTGGGTAACAATGAGTGC 47227 Query 76562 TTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATT 76621 || || || ||||| | ||||||||| | | |||||| || ||||| | Sbjct 47226 TTCGAGCCTTACACTTCCAACATCTACTCTCGCCGTGTCCTCGCTGGCGAGTTCCAGGTC 47167 Query 76622 GTCAACAAGCACCTCG----TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATAT 76677 || || | ||| | |||| ||||| | || ||||||||||| | || Sbjct 47166 GTTAA----CCCCTGGTTGCTCAAGGACCTTGTTGACATGGGTCTCTGGTCTGATAGCAT 47111 Query 76678 GAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGA 76737 |||| | | || | | ||| ||||| ||||| || ||| | | || || | ||| Sbjct 47110 GAAGAACCGTATCATTGCCGAGGGCGGTTCAATTCAGAACATCCCCAACATTCCTGCTGA 47051 Query 76738 TATCAAGAATCTCTACCGCACAGTGTGGGAA--ATCAAGATGAA-AGATGTCATTGACAT 76794 ||||||| ||| ||| || || |||||| ||| | ||| | |||| | || Sbjct 47050 TATCAAGGCTCTTTACAAGACCGTCTGGGAAATATCCCAACGAACCGTTGTC---CAGAT 46994 Query 76795 GGCCGCAGATCGTGGTCGCTTCATTGATCA 76824 |||||| || |||||| |||||||| || Sbjct 46993 GGCCGCTGACCGTGGTGCGTTCATTGACCA 46964 >seq19 Length=350955 Score = 102 bits (112), Expect = 1e-16 Identities = 143/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAA--AGTCTCGCTCCTTCGCCGAG 65079 |||||||| | ||||| || | ||| ||| | |||| |||| | |||||||| | Sbjct 189649 AAGAAGGCCGACTGGGCCCTGCACTGGATTGCCGACAAGAAGTC---CACCTTCGCCCAA 189705 Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATT 65139 || ||| |||| || || ||| ||||||||||||||| || | ||| | || Sbjct 189706 CGTCTTATTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGAGCCTTCGCTTCCATC 189765 Query 65140 TATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCC 65199 | ||| | |||||||| ||||||||||| || || |||||| || ||||| || || Sbjct 189766 TTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAACTCATCTCG 189825 Query 65200 CGAGATGAGGGTCTCCAC 65217 || ||||||||||| ||| Sbjct 189826 CGTGATGAGGGTCTGCAC 189843 >seq60 Length=210480 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||| ||||| || || || || ||||||| || || || ||||| ||||| | Sbjct 199903 TGGTGCGAAGATACCTCGCGGTGCGATTCTCGCTGGACCCCCTGGAACGGGTAAGACATT 199962 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CA 175392 || || ||||| ||| || |||||| || |||||| | || | | || | || Sbjct 199963 ACTTGCGAAAGCCACCGCTGGCGAATCAGGAGTACCATTCTTT-AGCG-TAAGCGGTTCA 200020 Query 175393 AACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452 | || || |||||||| |||||||| ||||| | ||| | |||||||| | | Sbjct 200021 GAATTCGTTGAGATGTTCGTTGGTGTTGGTGCGTCCCGAGTTAGGGATCTCTTCGCCACA 200080 Query 175453 GCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 || || ||||| || ||||| |||| ||||||||||||||||| Sbjct 200081 GCGCGAAAAAATACGCCGTGTATCATCTTTATTGATGAGATTGATGC 200127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565834154400