Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq122 212 7e-50
seq19 102 1e-16
seq60 93.3 5e-14
>seq122
Length=136518
Score = 212 bits (234), Expect = 7e-50
Identities = 1053/1650 (64%), Gaps = 49/1650 (3%)
Strand=Plus/Minus
Query 75201 TCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACA 75260
|| |||| | |||||| | ||| ||||||| || || |||||||| || || ||
Sbjct 48590 TCGTGGAGAGACCACAGCATATGATCATGCGTGTGGCTGTCGGCATCTGGGGCGACGATG 48531
Query 75261 TTGATTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAAC 75318
|||| ||| | |||| ||| || ||||| ||| || |||| ||| || |
Sbjct 48530 TTGAGAAGGTCATTCAGACCTACAACCTCATGTCTAGCAAA-TAC-TTCACTCATGCTTC 48473
Query 75319 ACCAACCCTCTTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCG 75377
||||| |||||||||||||| ||||| || || ||| | || ||||||||| |||
Sbjct 48472 CCCAACTCTCTTCAATGCTGGGACACCCCAGGCC-CAGCTCTCGTCTTGCTTCCTCGTCG 48414
Query 75378 CCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCT 75437
|| ||||| || || | |||||||| | || || | | ||||| ||||
Sbjct 48413 ACATGAAGGACGATAGCATTGAGGGTATCTACGACACCCTCAAGACTTGTGCCATGATCT 48354
Query 75438 CAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA 75497
| ||| ||| || |||||||| | ||||||| | | || | | || |
Sbjct 48353 CCAAGATGGCCGGTGGTATTGGTCTCAACATCCACCGCATCCGTGCTACTGGCTCATACA 48294
Query 75498 TTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCA 75557
|| || || || || || | || ||| | || ||||| || || || || ||
Sbjct 48293 TTGCTGGCACTAACGGCACCTCGAACGGCATTGTACCCATGCTACGTGTCTTCAATAACA 48234
Query 75558 CAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGTCCAT-CGCGGTCTACTTG 75613
| || | || ||| |||| | | ||| | || ||| | | ||| ||||| |
Sbjct 48233 CTGCAAGATACGTAGATCAGG-GTGGCAACAAGAGACCTGGTGCTTTCGCCATCTACCTC 48175
Query 75614 GAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAA 75673
|| || ||||| | ||| | | ||||||||||| | ||| ||||| || | ||
Sbjct 48174 GAGCCTTGGCACTCGGATGTTTTCGAGTTCCTTGATCTTCGAAAGAACCATGGCAAGGAG 48115
Query 75674 GAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGG 75733
|| | ||| | |||||||| | || |||||||| || || |||||||| ||
Sbjct 48114 GAAGTTCGTGCCCGCGATCTCTTCCTGGCTCTCTGGATTCCTGATCTCTTCATGAAACGT 48055
Query 75734 GTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC 75793
|||||| || ||| | ||| | || | ||||| || || || ||||| | |||
Sbjct 48054 GTTGAGAAGAATGGAGAGTGGACCCTCATGTGTCCTAACGAGTGCCCTGGTCTAGCTGAC 47995
Query 75794 GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAAT 75853
| || || ||||| || ||||| ||| ||||| |||| |||||| | | |
Sbjct 47994 GTTTATGGCGATGAGTTCGAGGCCCTGTACGAGAAGTACGAAGCAGAGGGTCGCGGC--- 47938
Query 75854 GCGACTGTACC---AGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGAC 75909
|| | | | || | | || | | ||| | || |||||| | | ||||| |||||
Sbjct 47937 -CGCCAGAAGATTAAGGCTCAGAAGCTGTGGTACGCCATTCTCGAGGCTCAGACTGAGAC 47879
Query 75910 TGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTT 75969
||||| || | ||||||||||||||| || ||| ||||||||||| |||||| |
Sbjct 47878 TGGAAATCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAATCT 47819
Query 75970 GGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGA 76029
|| || || ||||| ||||||||||| || || | |||||| | | |||||
Sbjct 47818 TGGTACTATTCGCAGCTCGAATCTTTGCACCGAGATCATTGAGTACTCCGCCCCTGATGA 47759
Query 76030 GACGGCTGTTTGCAATTTGGCATCAATCGC----CCTTCCAAAGTATGTCAATGAAGAGA 76085
| |||||| ||||| || || || |||| || ||| || || | || | ||
Sbjct 47758 GGTGGCTGTCTGCAACTTAGCTTCCCTCGCGTTGCCGTCCTTTGT-TGACTATAACGA-- 47702
Query 76086 CTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAA 76145
|||||| ||| | | || | ||||| | || | | || | ||| | |
Sbjct 47701 -AGGCACTTATGACTTCCAGAAGTTGCATGAGGTTACCCAAGTCGTCGTTCACAATTTGA 47643
Query 76146 ACCGAGTCATTGACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGA 76204
|| || | ||||| |||| ||| ||||| ||| || || || || ||||||
Sbjct 47642 ACAGAATTATTGATGTCAATTATTACCCCGTCCCAGA-GGCCCGTAACAGCAACATGCGA 47584
Query 76205 CACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTAC 76264
||| | || |||||| | |||||||| ||||| || ||| ||| | | || ||
Sbjct 47583 CACCGTCCCATTGGTCTTGGTGTTCAGGGTCTTGCTGATACATTCTTGGCATTGCG-TAT 47525
Query 76265 G-CATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCA 76323
| | ||||| ||| || || | | | || | ||||| || || || || ||
Sbjct 47524 GCCTTTTGAGTCACCAGAGGCTAGACAATTAAACAAGCAGATCTTCGAGACGATCTACCA 47465
Query 76324 CGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383
|| || || ||| || | || | | | |||| | || || | ||
Sbjct 47464 TGCCGCCTTGACTGCGTCCACGGAGATTGCCAAGGTCGAAGGCCCTTACTCTACCTACGA 47405
Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AG 76441
||||||||||| || || || | ||||| | || |||| |||| || | ||| |
Sbjct 47404 GGGTTCTCCCGTCTCGCAGGGCATCCTTCAATACGACATGT-GGAATGTCACCCCATCGG 47346
Query 76442 CTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 76501
|| | |||||| |||||||| | |||||| | || ||| | || |||||
Sbjct 47345 ATC-TTTGGGACTGGACCAGCCTCAAGGAGCAAATCAAGCAAAATGGTGTGCGCAACAGC 47287
Query 76502 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 76561
| ||| | || || ||||| || ||| ||| | || ||||||||||| ||||| |||
Sbjct 47286 TTGTTGGTCGCCCCCATGCCCACGGCCAGCACATCCCAGATCTTGGGTAACAATGAGTGC 47227
Query 76562 TTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATT 76621
|| || || ||||| | ||||||||| | | |||||| || ||||| |
Sbjct 47226 TTCGAGCCTTACACTTCCAACATCTACTCTCGCCGTGTCCTCGCTGGCGAGTTCCAGGTC 47167
Query 76622 GTCAACAAGCACCTCG----TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATAT 76677
|| || | ||| | |||| ||||| | || ||||||||||| | ||
Sbjct 47166 GTTAA----CCCCTGGTTGCTCAAGGACCTTGTTGACATGGGTCTCTGGTCTGATAGCAT 47111
Query 76678 GAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGA 76737
|||| | | || | | ||| ||||| ||||| || ||| | | || || | |||
Sbjct 47110 GAAGAACCGTATCATTGCCGAGGGCGGTTCAATTCAGAACATCCCCAACATTCCTGCTGA 47051
Query 76738 TATCAAGAATCTCTACCGCACAGTGTGGGAA--ATCAAGATGAA-AGATGTCATTGACAT 76794
||||||| ||| ||| || || |||||| ||| | ||| | |||| | ||
Sbjct 47050 TATCAAGGCTCTTTACAAGACCGTCTGGGAAATATCCCAACGAACCGTTGTC---CAGAT 46994
Query 76795 GGCCGCAGATCGTGGTCGCTTCATTGATCA 76824
|||||| || |||||| |||||||| ||
Sbjct 46993 GGCCGCTGACCGTGGTGCGTTCATTGACCA 46964
>seq19
Length=350955
Score = 102 bits (112), Expect = 1e-16
Identities = 143/198 (72%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAA--AGTCTCGCTCCTTCGCCGAG 65079
|||||||| | ||||| || | ||| ||| | |||| |||| | |||||||| |
Sbjct 189649 AAGAAGGCCGACTGGGCCCTGCACTGGATTGCCGACAAGAAGTC---CACCTTCGCCCAA 189705
Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATT 65139
|| ||| |||| || || ||| ||||||||||||||| || | ||| | ||
Sbjct 189706 CGTCTTATTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGAGCCTTCGCTTCCATC 189765
Query 65140 TATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCC 65199
| ||| | |||||||| ||||||||||| || || |||||| || ||||| || ||
Sbjct 189766 TTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAACTCATCTCG 189825
Query 65200 CGAGATGAGGGTCTCCAC 65217
|| ||||||||||| |||
Sbjct 189826 CGTGATGAGGGTCTGCAC 189843
>seq60
Length=210480
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/227 (70%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334
|||||| ||||| || || || || ||||||| || || || ||||| ||||| |
Sbjct 199903 TGGTGCGAAGATACCTCGCGGTGCGATTCTCGCTGGACCCCCTGGAACGGGTAAGACATT 199962
Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CA 175392
|| || ||||| ||| || |||||| || |||||| | || | | || | ||
Sbjct 199963 ACTTGCGAAAGCCACCGCTGGCGAATCAGGAGTACCATTCTTT-AGCG-TAAGCGGTTCA 200020
Query 175393 AACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452
| || || |||||||| |||||||| ||||| | ||| | |||||||| | |
Sbjct 200021 GAATTCGTTGAGATGTTCGTTGGTGTTGGTGCGTCCCGAGTTAGGGATCTCTTCGCCACA 200080
Query 175453 GCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499
|| || ||||| || ||||| |||| |||||||||||||||||
Sbjct 200081 GCGCGAAAAAATACGCCGTGTATCATCTTTATTGATGAGATTGATGC 200127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596565834154400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |