Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq244 96.9 5e-15 >seq244 Length=60485 Score = 96.9 bits (106), Expect = 5e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || |||||||| ||||| |||||||| ||||||| ||| ||| Sbjct 26416 ATGCAGATTTTTGTCAAGACATTGACGGGAAAGACTATTACCCTAGAAGTTGAATCTTCC 26475 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || |||||||| | || || || || || |||||||| ||||| || || Sbjct 26476 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 26535 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 ||| | | || | || ||||||||||| |||||| Sbjct 26536 CAACGTCTCATCTTCGCTGGTAAGCAGCTGGAAGAT 26571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731867380058000