Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq87 154 1e-32
seq244 140 2e-28
seq5 98.7 6e-16
>seq87
Length=177310
Score = 154 bits (170), Expect = 1e-32
Identities = 167/219 (76%), Gaps = 8/219 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| ||||||||||||||| ||||| ||||| || || | || | ||
Sbjct 65636 AGGACGAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCT 65577
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| ||||||||||||||||| |||||||| | || | |||||||||||
Sbjct 65576 TCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCC 65517
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || | | ||| || |||| ||| ||
Sbjct 65516 TGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCGCTAGACTCCACCTCAAGGGTGAT 65461
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
||||| |||||||||||||| || ||||||||||||||
Sbjct 65460 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 65422
>seq244
Length=60485
Score = 140 bits (154), Expect = 2e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||||||||||||||||||||| ||||| || || |||| | ||
Sbjct 25880 AGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCC 25821
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| ||||||||||| ||||| |||| ||| || ||||| | || | |||||||||||
Sbjct 25820 TCGAGTTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCC 25761
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || ||||| |||| || ||||||
Sbjct 25760 TGGATCTTCGACTTGACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTC 25701
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||| ||||| || |||||||||||
Sbjct 25700 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 25669
Score = 109 bits (120), Expect = 4e-19
Identities = 148/204 (73%), Gaps = 8/204 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| || |||||||||||||| ||||| || ||| | || ||||
Sbjct 26171 AGGACGAGGTGAAGAGTCGATTCCTTCTGAATGTTGTAGTCGGACAGGGTTCGGCCATCC 26112
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||| |||| ||| |||||||| | || | |||||||||||
Sbjct 26111 TCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCT 26052
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| || | |||||| |||| ||| ||
Sbjct 26051 TGGATCTTCGACTTAAC--AT--TGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGAT 25996
Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965
||||||||| || |||||||| ||
Sbjct 25995 GGTCTTTCCGGTAAGGGTCTTGAC 25972
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|| || || ||||| | || ||||||||||||||| ||||| || | || ||
Sbjct 26402 CTGAGAACAAGGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTTCGGCCA 26343
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||| ||||| || || ||||| |||||||| ||||| |||| | |||||||||
Sbjct 26342 TCCTCCAACTGCTTACCCGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCCTCCTTG 26283
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || ||||||| | || | || | ||| || |||| || ||
Sbjct 26282 TCCTGGATCTTGGATTTGACGTTGTCGATTGTGTCCGAAGACTCCACCTCAAGAGTGATC 26223
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || ||||||||||| || ||||| |||||
Sbjct 26222 GTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 26188
>seq5
Length=467666
Score = 98.7 bits (108), Expect = 6e-16
Identities = 148/208 (71%), Gaps = 8/208 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | |||| ||| ||||| ||||| ||||| || || | || | ||
Sbjct 48677 AGGACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCC 48618
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| |||||||||||||| || || ||||| | || | |||||||||||
Sbjct 48617 TCAAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCCTCCTTGTCC 48558
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || | ||| || || | ||| ||
Sbjct 48557 TGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 48502
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAG 34969
||||| ||||| |||||||| || |||
Sbjct 48501 AGTCTTACCCGTAAGGGTCTTCACGAAG 48474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325690795462595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |