Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq244 107 4e-18
>seq244
Length=60485
Score = 107 bits (118), Expect = 4e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
||||| | ||||||||| || || ||||| || || || || || ||| || ||
Sbjct 26399 AGAACAAGGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTTCGGCCATCC 26340
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| | || || || |||||||| |||| |||||| || || || ||||| ||||| ||
Sbjct 26339 TCCAACTGCTTACCCGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCCTCCTTGTCC 26280
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
|| ||||| | ||| || || || || || || || || || || | ||| ||||||
Sbjct 26279 TGGATCTTGGATTTGACGTTGTCGATTGTGTCCGAAGACTCCACCTCAAGAGTGATCGTC 26220
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || | ||||| || || || |||||
Sbjct 26219 TTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 26188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981820847271195
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |