Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq244 107 4e-18 >seq244 Length=60485 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| | ||||||||| || || ||||| || || || || || ||| || || Sbjct 26399 AGAACAAGGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTTCGGCCATCC 26340 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || | || || || |||||||| |||| |||||| || || || ||||| ||||| || Sbjct 26339 TCCAACTGCTTACCCGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCCTCCTTGTCC 26280 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||| | ||| || || || || || || || || || || | ||| |||||| Sbjct 26279 TGGATCTTGGATTTGACGTTGTCGATTGTGTCCGAAGACTCCACCTCAAGAGTGATCGTC 26220 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || | ||||| || || || ||||| Sbjct 26219 TTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 26188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981820847271195