Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq122 152 5e-32 seq87 111 2e-19 seq5 109 5e-19 seq244 107 2e-18 >seq122 Length=136518 Score = 152 bits (168), Expect = 5e-32 Identities = 867/1359 (64%), Gaps = 65/1359 (5%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTT 148109 || ||| ||||||||||||||| ||||||||||||||||| | ||| | ||| || Sbjct 46955 GATTGGGACTGGTCAATGAACGCACCACGGTCAGCGGCCATCTGGACAACGGTTCG--TT 47012 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | || |||||| | |||||||| || |||||||| | | |||||| | |||| Sbjct 47013 GGGAT-ATTTCCCAGACGGTCTTGTAAAGAGCCTTGATATCAGCAGGAATGTTGGGGATG 47071 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | || |||| | |||| || | || ||| || | | || Sbjct 47072 TTCTGAATTGAACCGCCCTCGGCAATGATACGGTTCTTCATGCTATCAGACCAGAGACCC 47131 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | || | ||||| | || || | | || || ||||| |||||||| ||||| || Sbjct 47132 ATGTCAACAAGGTCCTTGAGCAACCAGGGGTTAACGACCTGGAACTCGCCAGCGAGGACA 47191 Query 148290 CGCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTG 148348 || || ||| || | |||| || | || || || |||| ||||| ||||| ||||| Sbjct 47192 CGGCG-AGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTCATTGTTACCCAAGATCTG 47250 Query 148349 CGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTT- 148407 | || | |||||||||||| || |||| || |||||||| ||| ||||| Sbjct 47251 GGATGTGCTGGCCGTGGGCATGGGGGCGACCAACAAGCTGTTGCGCACACC---ATTTTG 47307 Query 148408 -TTATTTTGC-GCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACAT 148465 || ||||| ||| || | ||||||||| || ||| || || || |||||||| Sbjct 47308 CTTGATTTGCTCCTTGAGGCTGGTCCAGTCCCAAAGATCCGATGGGGTGACATTCCACAT 47367 Query 148466 GTCGTACTGCAGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT 148524 |||||| || || ||||| | || || |||| |||||||| | ||| || || | Sbjct 47368 GTCGTATTGAAGGATGCC-CTGCGAGACGGGAGAACCCTCGTAGGTAGAGTAAGGGCCTT 47426 Query 148525 GCGCCGCCGCCAGTTCGCAGCTCGC-CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATT 148583 || || | || | ||| || || ||| | | ||| ||||||||| || Sbjct 47427 CGACCTTGGCAATCTCCGTGGACGCAGTCAAG-GCGGCATGGTAGATCGTCTCGAAGATC 47485 Query 148584 TGCCTGTTGAGCAGCGCCGCCGACTCG-CTTTCGTACGGCATACGCAGCCGCACAAACGC 148642 ||| |||| | | ||| || | || | |||||||||| || || | Sbjct 47486 TGCTTGTTTAATTGTCTAGCC-TCTGGTGACTCAAAAGGCATACGCAATGCCAAGAATGT 47544 Query 148643 GTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGC 148702 || ||||| ||||| || || | |||||||| |||||| |||||| | || || Sbjct 47545 ATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGGGC 47604 Query 148703 GCTCT-CGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCT 148761 |||| || || || | ||| || || || ||| | |||| | || || || | Sbjct 47605 -CTCTGGGACGGGGTAATAATTGACATCAATAATTCTGTTCAAATTGTGAACGACGACTT 47663 Query 148762 TTGTAA--TTCTGC----GCAGCAATTCAAAA------TCGTACTTGTCATCTACGATGC 148809 |||| | ||| | | || ||| || |||| | |||| || | | Sbjct 47664 GGGTAACCTCATGCAACTTCTGGAAGTCATAAGTGCCTTCGTTATAGTCA---ACAAAGG 47720 Query 148810 ATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACT 148869 | ||| || |||| || |||| ||||| || ||| |||||| |||||| ||||| Sbjct 47721 A-CGG--CAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACT 47777 Query 148870 CTACGATCTCGGCGCACAGATT---GCTGCATTTGATCACGCCCACG-TTCTTTTGATTG 148925 | | |||||||| ||| ||||| ||||| || | ||| | ||||| || || Sbjct 47778 CAATGATCTCGGTGCAAAGATTCGAGCTGC----GAATAGTACCAAGATTCTTCTGGTTA 47833 Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTT 148985 ||||||| |||||| |||||||| |||||| | || ||||| || ||| | Sbjct 47834 CTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCC 47893 Query 148986 TCCACTAT---GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCC 149042 || | || | ||| ||| | ||| || | | ||| | |||||||| | Sbjct 47894 TCGAGAATGGCGTACC---ACAGCTTCTGAGCCTTAATCTTCTGGCGGCCGCGACCCT-C 47949 Query 149043 TGC-TCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGG 149101 ||| ||||| ||||| ||||||| | ||||| || || | ||||| || Sbjct 47950 TGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAGACCAGG 48009 Query 149102 GCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAG 149161 ||||| || || |||||||| | |||| | || | | | || || ||||| || || Sbjct 48010 GCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTCATGAAGAG 48069 Query 149162 ATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTT 149221 ||| || | |||||| || | ||| ||||| || || || ||| ||| Sbjct 48070 ATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTT 48129 Query 149222 GCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAG 149281 || || | || | ||| | |||| |||||| ||||| | ||| | |||| Sbjct 48130 CTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAGATGGCGAA 48189 Query 149282 CGCGCC------CTTGCGCTTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACAC 149335 || || |||| ||||| ||||| || |||| | | |||| || || || Sbjct 48190 AGCACCAGGTCTCTTG---TTGCCACCCTGATCTACGTATCTTGCAGTGTTATTGAAGAC 48246 Query 149336 TCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGT 149374 || | ||| ||| ||||||| | | ||||||||||| Sbjct 48247 ACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGT 48285 >seq87 Length=177310 Score = 111 bits (122), Expect = 2e-19 Identities = 150/207 (72%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | |||| ||| ||||| || ||||| ||| | || ||| ||| ||||| Sbjct 65628 ATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGT--ACGGCCGTCTTCGAGT 65571 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || |||||||||||||| || || || |||||||| |||| Sbjct 65570 TGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATC 65511 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | |||||| | | |||||| || | ||||| || ||||| Sbjct 65510 TTGGACTTGACATTGTCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTGCCC 65451 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || ||||| ||||||||| Sbjct 65450 GTGAGGGTCTTGACGAAGATCTGCATG 65424 >seq5 Length=467666 Score = 109 bits (120), Expect = 5e-19 Identities = 140/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 ||||||||||||||| || ||||| ||| | || || | |||||| || |||||| Sbjct 48663 GGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCC--GTCCTCAAGTTGCTTG 48606 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||| |||||||| || ||||| |||||||| |||||| | Sbjct 48605 CCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGAC 48546 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||||| | |||||| |||| ||||| || || || || || Sbjct 48545 TTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTAAGG 48486 Query 133641 GTTTTTACGAA 133651 || || ||||| Sbjct 48485 GTCTTCACGAA 48475 >seq244 Length=60485 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| ||||||||||||| || ||| ||| | || || |||||||| || Sbjct 26612 GTGGATTCCTTCTGGATATTGTAATCGCTCAAGGTGCGACCA-TCTTCCAGCTGCTTACC 26554 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || ||||| || ||||| |||||||||||||| ||||| ||| Sbjct 26553 AGCGAAGATGAGACGTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGAATCTTGCTCTT 26494 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| | || || || | ||| | || || || |||| || Sbjct 26493 CACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAGGGTAATAGTCTTTCCCGTCAATGT 26434 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 26433 CTTGACAAAAATCTGCAT 26416 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| || ||||| ||| | ||| ||| ||||||||| ||||| | Sbjct 25866 GGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACC-GTCCTCGAGTTGCTTTC 25808 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| | ||||| ||||||||||| || || |||||||| |||||| || Sbjct 25807 CAGCGAAAATCAATCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCGACT 25748 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | || || | || || || || | |||| ||| ||||| || |||| Sbjct 25747 TGACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGAG 25688 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 25687 TCTTGACGAAGATCTGCAT 25669 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| ||| || || | | | ||||| ||||||||||| Sbjct 26156 GTCGATTCCTTCTGAATGTTGTAGTCGGACAGGGTTCGGCCA-TCCTCAAGCTGCTTGCC 26098 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | ||||||||||| ||||| || || |||||||| |||||| ||| Sbjct 26097 GGCGAAAATCAATCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTGGATCTTCGACTT 26038 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| | ||| || || | ||||| ||| || ||||| || || Sbjct 26037 AACATTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTTCCGGTAAGGGT 25978 Query 133643 TTTTACGA 133650 || |||| Sbjct 25977 CTTGACGA 25970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417748406200