Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq122 141 2e-28 >seq122 Length=136518 Score = 141 bits (156), Expect = 2e-28 Identities = 223/319 (70%), Gaps = 3/319 (1%) Strand=Plus/Minus Query 110686 TTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA-- 110743 |||| || ||| || | |||||||| ||||||||| ||| || |||| ||||| || Sbjct 48263 TTGTACCCATGCTACGTGTCTTCAATAACACTGCAAGATACGTAGATCAGGGTGGCAACA 48204 Query 110744 -GAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCT 110802 |||| ||| | || || ||||| ||||| |||||||| || ||| | || || ||| Sbjct 48203 AGAGACCTGGTGCTTTCGCCATCTACCTCGAGCCTTGGCACTCGGATGTTTTCGAGTTCC 48144 Query 110803 TAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAA 110862 | || ||||| || || || || || ||| | || || ||| | || || Sbjct 48143 TTGATCTTCGAAAGAACCATGGCAAGGAGGAAGTTCGTGCCCGCGATCTCTTCCTGGCTC 48084 Query 110863 TGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGT 110922 | |||||| | ||| | ||||||||||||||| | | ||||| |||| | || |||| Sbjct 48083 TCTGGATTCCTGATCTCTTCATGAAACGTGTTGAGAAGAATGGAGAGTGGACCCTCATGT 48024 Query 110923 GTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACG 110982 ||||| | | ||||||||| |||| || ||||| | ||||| || | ||| |||| Sbjct 48023 GTCCTAACGAGTGCCCTGGTCTAGCTGACGTTTATGGCGATGAGTTCGAGGCCCTGTACG 47964 Query 110983 AAAAATATGAAAAAGAAGG 111001 | || || ||| ||| || Sbjct 47963 AGAAGTACGAAGCAGAGGG 47945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186805120950305