Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq87 111 1e-19
seq244 98.7 7e-16
>seq87
Length=177310
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605
||| || |||||||| || || |||||||| |||||||| || || |||| || | |||
Sbjct 65628 ATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCGAGTTG 65569
Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665
|| ||||| || |||| |||||||| || | || | ||| || ||||| || ||
Sbjct 65568 CTTGCCGGCGAAGATCAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTT 65509
Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724
|| | ||| ||| | ||||||||| || ||||| |||| ||||| || || || |
Sbjct 65508 GGACTTGA-CATTGTCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTGCCCG 65450
Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749
| | || || || |||||||||||
Sbjct 65449 TGAGGGTCTTGACGAAGATCTGCAT 65425
>seq244
Length=60485
Score = 98.7 bits (108), Expect = 7e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | || | || || |||||||| || || |||||||| |||||
Sbjct 25895 CCACCACGCAGACGGAGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAA 25836
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| |||| || | ||| ||||| || |||||||| ||||| || || | ||
Sbjct 25835 AGAGTGCGACCGTCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCGGGAGGA 25776
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||| || ||||| || ||| || | | | ||| | ||| || ||||| ||
Sbjct 25775 ATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGTTGTCGATGGTATCCGAGGATTCGAC 25717
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| || || || || | || || || |||||||||||
Sbjct 25716 CTCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 25669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328701976929600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |