Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq244 82.4 7e-11 >seq244 Length=60485 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | || || || || || ||||| ||||||| ||| || |||||| Sbjct 26625 AACCAAGTGGAGCGTGGATTCCTTCTGGATATTGTAATCGCTCAAGGTGCGACCATCTTC 26566 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| ||||| | |||| ||||| || ||||| ||||| |||||||| || || Sbjct 26565 CAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTG 26506 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| || |||| | || | || |||| | || ||||| | || | || || Sbjct 26505 AATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAGGGTAATAGTCTT 26446 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||| || || | ||||||||||| Sbjct 26445 TCCCGTCAATGTCTTGACAAAAATCTGCAT 26416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608191391800