Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq19 190 3e-42 seq99 98.7 1e-14 >seq19 Length=350955 Score = 190 bits (210), Expect = 3e-42 Identities = 359/516 (70%), Gaps = 24/516 (5%) Strand=Plus/Plus Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 || ||| ||| | |||||| || ||| ||| || ||||| ||||||||||||||| | | Sbjct 189297 GCAGATCTGGCAGATGTAC-AAGAAGCACGAAGCTTCCTTCTGGACCGCCGAGGAGATTG 189355 Query 1455832 ACCTCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCAT 1455884 | || | || |||| ||||| ||| | | ||| |||||| Sbjct 189356 ATCTATCCAAGGATCTCCACG----ACTGGAGCAACCGCCTAAACGATGACGAGAAATTC 189411 Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944 |||||| ||| |||||||||| || |||||| || ||||| || ||||||||| Sbjct 189412 TTCATCTCCCACATCCTCGCCTTCTT-CGCCGCATCTGACGGCATTGTCAACGAGAACCT 189470 Query 1455945 GGCCGGCCGCTT-TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCC 1456003 | || || || | || |||||||| | |||||||| || | || ||||| |||| Sbjct 189471 TGTCGAGCGATTCTCTGGC-GAGGTCCAGATCCCAGAGGCCCGATGCTTCTACGGCTTCC 189529 Query 1456004 AGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCA 1456063 ||||| || || ||||||||||| || || ||||| ||||| || ||||||||| ||| Sbjct 189530 AGATCATGATGGAGAACATCCACTCCGAGACTTACTCCCTCCTCATTGACACCTACATCA 189589 Query 1456064 AGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGA 1456123 |||| || | | ||||| || ||||| ||||| || || | || | | | | Sbjct 189590 AGGAGCCTGCCCAGAAGACACATCTCTTCAATGCCATTGAGACCATTCCTTGCATCCGCA 189649 Query 1456124 AAAAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGA 1456180 | |||||||||||||| || | ||||| | ||||| || || || ||| ||| | Sbjct 189650 AGAAGGCCGACTGGGCCCTGCACTGGATTGCCGACAAGAAG----TCCAC-CTTCGCCCA 189704 Query 1456181 GCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCAT 1456239 || || | | ||| ||||| || ||||| ||||| ||| || ||| |||| Sbjct 189705 ACGTCTTATTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGAGCCTTCGCTTCCAT 189764 Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||| |||||||||||||| || |||||||||||||| Sbjct 189765 CTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCT 189800 Score = 140 bits (154), Expect = 5e-27 Identities = 238/337 (71%), Gaps = 10/337 (3%) Strand=Plus/Plus Query 1456448 GGTTTGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGC-CGTCGAC 1456506 ||| ||||| ||||| ||||| ||||| | | | | | ||||||| | | || | Sbjct 189835 GGTCTGCACACCGACTTCGCCTGCCTGCTGTTCTCC---CACCTCAACAACCGCCCCGGC 189891 Query 1456507 C--GACGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGC 1456564 |||||| | || |||||||| ||| |||||| || ||| | ||||| | | Sbjct 189892 AAGGACGTGGTCGAGAAGATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGACG 189951 Query 1456565 GAGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGA 1456624 ||| | ||||| || || | ||||||||||||| | |||||| |||||||| || Sbjct 189952 GAGGCTCTGCCCTGTGCCCTACTAGGCATGAACGCCAAC-CTCATGAAGCAGTACATCGA 190010 Query 1456625 ATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCC 1456684 || ||||||||||||||||| | ||| |||||| || ||||| ||||| | || Sbjct 190011 GTTC-GTCGCCGACCGCCTGCTGGTGGCCCTCGGCAACG-AGAAGGTGTACCGCTCCACC 190068 Query 1456685 AACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGC 1456744 ||||| ||| | |||||| ||||| || | |||||||||||||| |||||| Sbjct 190069 AACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAG 190128 Query 1456745 CGCG-TGGCGAGTACGCCAAGGCCGGCGTCACCGCCA 1456780 |||| ||| || ||| |||||||| |||| |||| Sbjct 190129 CGCGTTGGTGATTACCAGAAGGCCGGTGTCATGGCCA 190165 >seq99 Length=160603 Score = 98.7 bits (108), Expect = 1e-14 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911 |||||||| || | || | | || || ||||| || ||| ||||||| ||||| Sbjct 133476 TGGGCGTCCGTTAATCGGCCGTAACGTAGAATGGCGCATCGGGATTGCAGGGGTTCGATA 133417 Query 332912 ACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATG 332971 | | | |||| ||| || || | ||| || ||||||||||||| | | ||||| Sbjct 133416 ATCTTGTTCGACTGGTTACATGCGAAGGCGAAGCGCGTCGTATTGGAGTAGATCTCCATC 133357 Query 332972 GTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATG 333031 || ||| || || || ||||| ||| || | || |||||| ||||||||||| | Sbjct 133356 GTACGCCGTAGCGCTTGCTGGGCTCCCGAGGTCATGCTGTCGGCTTCGTCGAGGATCACA 133297 Query 333032 ATCTTGTGGCGCCCGTGCGGCAGA 333055 ||||||||||| ||| |||| ||| Sbjct 133296 ATCTTGTGGCGGCCGGGCGGAAGA 133273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177762491821810