Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq19 190 3e-42
seq99 98.7 1e-14
>seq19
Length=350955
Score = 190 bits (210), Expect = 3e-42
Identities = 359/516 (70%), Gaps = 24/516 (5%)
Strand=Plus/Plus
Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831
|| ||| ||| | |||||| || ||| ||| || ||||| ||||||||||||||| | |
Sbjct 189297 GCAGATCTGGCAGATGTAC-AAGAAGCACGAAGCTTCCTTCTGGACCGCCGAGGAGATTG 189355
Query 1455832 ACCTCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCAT 1455884
| || | || |||| ||||| ||| | | ||| ||||||
Sbjct 189356 ATCTATCCAAGGATCTCCACG----ACTGGAGCAACCGCCTAAACGATGACGAGAAATTC 189411
Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944
|||||| ||| |||||||||| || |||||| || ||||| || |||||||||
Sbjct 189412 TTCATCTCCCACATCCTCGCCTTCTT-CGCCGCATCTGACGGCATTGTCAACGAGAACCT 189470
Query 1455945 GGCCGGCCGCTT-TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCC 1456003
| || || || | || |||||||| | |||||||| || | || ||||| ||||
Sbjct 189471 TGTCGAGCGATTCTCTGGC-GAGGTCCAGATCCCAGAGGCCCGATGCTTCTACGGCTTCC 189529
Query 1456004 AGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCA 1456063
||||| || || ||||||||||| || || ||||| ||||| || ||||||||| |||
Sbjct 189530 AGATCATGATGGAGAACATCCACTCCGAGACTTACTCCCTCCTCATTGACACCTACATCA 189589
Query 1456064 AGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGA 1456123
|||| || | | ||||| || ||||| ||||| || || | || | | | |
Sbjct 189590 AGGAGCCTGCCCAGAAGACACATCTCTTCAATGCCATTGAGACCATTCCTTGCATCCGCA 189649
Query 1456124 AAAAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGA 1456180
| |||||||||||||| || | ||||| | ||||| || || || ||| ||| |
Sbjct 189650 AGAAGGCCGACTGGGCCCTGCACTGGATTGCCGACAAGAAG----TCCAC-CTTCGCCCA 189704
Query 1456181 GCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCAT 1456239
|| || | | ||| ||||| || ||||| ||||| ||| || ||| ||||
Sbjct 189705 ACGTCTTATTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGAGCCTTCGCTTCCAT 189764
Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||| |||||||||||||| || ||||||||||||||
Sbjct 189765 CTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCT 189800
Score = 140 bits (154), Expect = 5e-27
Identities = 238/337 (71%), Gaps = 10/337 (3%)
Strand=Plus/Plus
Query 1456448 GGTTTGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGC-CGTCGAC 1456506
||| ||||| ||||| ||||| ||||| | | | | | ||||||| | | || |
Sbjct 189835 GGTCTGCACACCGACTTCGCCTGCCTGCTGTTCTCC---CACCTCAACAACCGCCCCGGC 189891
Query 1456507 C--GACGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGC 1456564
|||||| | || |||||||| ||| |||||| || ||| | ||||| | |
Sbjct 189892 AAGGACGTGGTCGAGAAGATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGACG 189951
Query 1456565 GAGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGA 1456624
||| | ||||| || || | ||||||||||||| | |||||| |||||||| ||
Sbjct 189952 GAGGCTCTGCCCTGTGCCCTACTAGGCATGAACGCCAAC-CTCATGAAGCAGTACATCGA 190010
Query 1456625 ATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCC 1456684
|| ||||||||||||||||| | ||| |||||| || ||||| ||||| | ||
Sbjct 190011 GTTC-GTCGCCGACCGCCTGCTGGTGGCCCTCGGCAACG-AGAAGGTGTACCGCTCCACC 190068
Query 1456685 AACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGC 1456744
||||| ||| | |||||| ||||| || | |||||||||||||| ||||||
Sbjct 190069 AACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAG 190128
Query 1456745 CGCG-TGGCGAGTACGCCAAGGCCGGCGTCACCGCCA 1456780
|||| ||| || ||| |||||||| |||| ||||
Sbjct 190129 CGCGTTGGTGATTACCAGAAGGCCGGTGTCATGGCCA 190165
>seq99
Length=160603
Score = 98.7 bits (108), Expect = 1e-14
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911
|||||||| || | || | | || || ||||| || ||| ||||||| |||||
Sbjct 133476 TGGGCGTCCGTTAATCGGCCGTAACGTAGAATGGCGCATCGGGATTGCAGGGGTTCGATA 133417
Query 332912 ACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATG 332971
| | | |||| ||| || || | ||| || ||||||||||||| | | |||||
Sbjct 133416 ATCTTGTTCGACTGGTTACATGCGAAGGCGAAGCGCGTCGTATTGGAGTAGATCTCCATC 133357
Query 332972 GTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATG 333031
|| ||| || || || ||||| ||| || | || |||||| ||||||||||| |
Sbjct 133356 GTACGCCGTAGCGCTTGCTGGGCTCCCGAGGTCATGCTGTCGGCTTCGTCGAGGATCACA 133297
Query 333032 ATCTTGTGGCGCCCGTGCGGCAGA 333055
||||||||||| ||| |||| |||
Sbjct 133296 ATCTTGTGGCGGCCGGGCGGAAGA 133273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177762491821810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |