Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq61 141 7e-29 >seq61 Length=209415 Score = 141 bits (156), Expect = 7e-29 Identities = 262/382 (69%), Gaps = 8/382 (2%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 || || ||| | || ||||| |||||| | ||||||||||| |||||||||||||| || Sbjct 195255 CCGAAGATTATCAACGGTCCGGAAATCCTTAATAAATATGTGGGTCAATCGGAAGAGAAC 195196 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTC 19547 || || ||||||| || || ||| ||| | | || | |||||| | | ||| Sbjct 195195 GTCAGAAAGATGTTTGCGGATGCAGAA-AAGGAGTACAAGGAGAAGGGCGAAGAGAGTGG 195137 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601 || ||||| || || | |||||| | ||||| ||||||||||||||||| | Sbjct 195136 CTTACACATCATCATCTTCGATGAACTTGACGCTGTCTGTAAGCAAAGAGGTAGCGGGAC 195077 Query 19602 TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661 || | | || || ||||| || ||||| || ||| |||| ||| | ||||| || Sbjct 195076 AGGAGGTACAGGTGTTGGTGACAGCGTAGTCAACCAGCTCTTGTCCAAACTCGACGGCGT 195017 Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721 ||||||| || || || || ||||||||||||| || || ||| | || || Sbjct 195016 GGACCAACTAAACAACATCTTGCTTATTGGCATGACCAACCGAAAGGATATGATCGATGA 194957 Query 19722 CGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATG 19781 || |||| ||||| ||||| | || | | | || ||| ||||| || || Sbjct 194956 TGCGCTATTGCGACCTGGTCGTCTCGAGGTCCACGTGGAGATTTCATTACCTGACGAGCA 194897 Query 19782 TGGACGTGTGGAAATTTTAAAC 19803 ||| ||||| ||||| ||||| Sbjct 194896 TGGTCGTGTACAAATTCTAAAC 194875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453553782525