Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq61 141 7e-29
>seq61
Length=209415
Score = 141 bits (156), Expect = 7e-29
Identities = 262/382 (69%), Gaps = 8/382 (2%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|| || ||| | || ||||| |||||| | ||||||||||| |||||||||||||| ||
Sbjct 195255 CCGAAGATTATCAACGGTCCGGAAATCCTTAATAAATATGTGGGTCAATCGGAAGAGAAC 195196
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTC 19547
|| || ||||||| || || ||| ||| | | || | |||||| | | |||
Sbjct 195195 GTCAGAAAGATGTTTGCGGATGCAGAA-AAGGAGTACAAGGAGAAGGGCGAAGAGAGTGG 195137
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601
|| ||||| || || | |||||| | ||||| ||||||||||||||||| |
Sbjct 195136 CTTACACATCATCATCTTCGATGAACTTGACGCTGTCTGTAAGCAAAGAGGTAGCGGGAC 195077
Query 19602 TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661
|| | | || || ||||| || ||||| || ||| |||| ||| | ||||| ||
Sbjct 195076 AGGAGGTACAGGTGTTGGTGACAGCGTAGTCAACCAGCTCTTGTCCAAACTCGACGGCGT 195017
Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721
||||||| || || || || ||||||||||||| || || ||| | || ||
Sbjct 195016 GGACCAACTAAACAACATCTTGCTTATTGGCATGACCAACCGAAAGGATATGATCGATGA 194957
Query 19722 CGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATG 19781
|| |||| ||||| ||||| | || | | | || ||| ||||| || ||
Sbjct 194956 TGCGCTATTGCGACCTGGTCGTCTCGAGGTCCACGTGGAGATTTCATTACCTGACGAGCA 194897
Query 19782 TGGACGTGTGGAAATTTTAAAC 19803
||| ||||| ||||| |||||
Sbjct 194896 TGGTCGTGTACAAATTCTAAAC 194875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397453553782525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |