Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq19 95.1 4e-14
seq122 86.0 2e-11
>seq19
Length=350955
Score = 95.1 bits (104), Expect = 4e-14
Identities = 125/172 (73%), Gaps = 1/172 (1%)
Strand=Plus/Plus
Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755
|| ||||| | | || || | || || || | || || || | || || || || ||
Sbjct 189693 CACCTTCGCCCAACGTCTTATTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGG-AG 189751
Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815
| || || |||||||||||| | || |||||||| || |||| |||||||||||| |
Sbjct 189752 CCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCA 189811
Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||||||| ||| || || |||||| |||| |||||||||||| || ||
Sbjct 189812 ACGAACTCATCTCGCGTGATGAGGGTCTGCACACCGACTTCGCCTGCCTGCT 189863
>seq122
Length=136518
Score = 86.0 bits (94), Expect = 2e-11
Identities = 215/320 (67%), Gaps = 10/320 (3%)
Strand=Plus/Minus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
||||||| |||| ||| | ||||| ||||| ||| || | ||||| ||||| || ||
Sbjct 48268 CGGCATTGTACCCATGCTACGTGTCTTCAATAACACTGCAAGATACGTAGATCAGGGTGG 48209
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACG 255090
| ||| | || || || ||| |||||||||| ||||| |||||| | || ||
Sbjct 48208 CAACAAGAGACCTGGTGCTTTCGCCATCTACCTCGAGCCTTGGCACTCGGATGTTTTCGA 48149
Query 255091 GTTTTTACTGCTGTCCGACAAGACC--GGCACCGAGGAGCTGATCGCCCGCGACATCTAC 255148
||| | || | | ||| | ||| |||| ||||| | |||||||| ||| |
Sbjct 48148 GTTCCT--TGATCTTCGAAAGAACCATGGCAAGGAGGAAGTTCGTGCCCGCGATCTCTTC 48091
Query 255149 ACCGCTGTCTGG--TGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGG 255205
||| ||||| | ||| |||| || ||| ||| || || | || |||| |||
Sbjct 48090 CTGGCTCTCTGGATTCCTG--ATCTCTTCATGAAACGTGTTGAGAAGAATGGAGAG-TGG 48034
Query 255206 AGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAA 255265
| |||||||||||| ||| | || ||||||| ||| || || || ||||| ||
Sbjct 48033 ACCCTCATGTGTCCTAACGAGTGCCCTGGTCTAGCTGACGTTTATGGCGATGAGTTCGAG 47974
Query 255266 AAACTGTATCTGGAGTACGA 255285
||||| | |||||||
Sbjct 47973 GCCCTGTACGAGAAGTACGA 47954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588325722969725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |