Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq122 203 4e-47
seq19 141 1e-28
>seq122
Length=136518
Score = 203 bits (224), Expect = 4e-47
Identities = 845/1312 (64%), Gaps = 31/1312 (2%)
Strand=Plus/Plus
Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTC 118213
||||| || |||||| || | ||| ||||| |||| ||||| ||||| ||||||||
Sbjct 47174 AACTCGCCAGCGAGGACACGGCG-AGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTC 47232
Query 118214 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273
||||||||||||||| |||| |||| ||| ||||||||||| || | | | ||||||
Sbjct 47233 ATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGACCAACAAGCTGTT 47292
Query 118274 ACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGT 118333
|| | ||| |||| | | || | |||||||| | |||||| | | ||
Sbjct 47293 GCGCACACCATTTTGCTTGATTTGCTCCTTGAGGCTGGTCCAGTCCCAAAGATCCGATGG 47352
Query 118334 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 118393
| | |||||| || | || ||||| || || || | || || ||||| | ||
Sbjct 47353 GGTGACATTCCACATGTCGTATTGAAGGATGCCCTGCGAGACGGGAGAACCCTCGTAGGT 47412
Query 118394 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 118453
|| ||||| || |||| || | || | | ||| | ||| || || || ||
Sbjct 47413 AGAGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGACGCAGTCAAGGCGGCATGGTAGAT 47472
Query 118454 TGTTTCAAAAAT--GCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGG 118511
|| || || || || | || |||| || | |||| || ||||| | | ||
Sbjct 47473 CGTCTCGAAGATCTGCTTGT-TTAATTGTCTAG-CCTCTGGTGACTCAAAAGGCATACGC 47530
Query 118512 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 118571
| | ||| ||| || ||||| || ||||| || ||||| || || |||| |||
Sbjct 47531 AATGCCAAGAATGTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCATG 47590
Query 118572 TTAGACTTCCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630
|| || || || ||| ||||| ||| |||| ||| |||| || || | |||
Sbjct 47591 TTGCTGTTACGGGCC-TCTGGGACGGGGTAATAATTGACATCAATAATTCTGTTCAAATT 47649
Query 118631 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 118690
| ||| || | || | ||||| | ||| | | | ||| || ||| || |
Sbjct 47650 GTGAACGACGACTTGGGTAACCTCATGCAACTTCTGGAAGTCATAAGTGCCT---TCGTT 47706
Query 118691 ATTGACATACTTAGGAAGG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 118746
|| | || || |||| || |||| || || | || || |||| ||||||
Sbjct 47707 ATAGTCA-ACAAAGGACGGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAG 47765
Query 118747 TATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCT 118806
| | |||||| || || || ||||| | || || || ||| || || | ||||
Sbjct 47766 GGGCGGAGTACTCAATGATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCT 47825
Query 118807 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCG 118866
| || || ||| ||| || |||||||||||||||| | || | || ||||| |
Sbjct 47826 TCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAG 47885
Query 118867 TTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAG-TGGCGTTGGCTCG 118924
| || | || |||||| || | ||| | | || | || | ||||| | | ||
Sbjct 47886 TCTGAGCCTCGAGAATGGCGTACCACAGCTTCTGAGCCTTAATCTTCTGGCG--GCCGCG 47943
Query 118925 CCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAG 118984
|||||| | |||||||| ||| ||||| || ||||| || || | || | ||
Sbjct 47944 ACCCTCTGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAG 48003
Query 118985 CCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCAT 119044
|| || || | || || | ||| | ||| | ||| || |||||| || |||||
Sbjct 48004 ACCAGGGCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTCAT 48063
Query 119045 GAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC 119104
|||||| || || |||||||| ||| ||||||||| || ||| |||| || | ||
Sbjct 48064 GAAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCC 48123
Query 119105 CTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC 119164
|| || || | || | || || | | ||||| |||||| || || ||||| |
Sbjct 48124 ATGGTTCTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAGAT 48183
Query 119165 CGCGATTGACCC----CTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAA 119220
|||| | || || | | ||| |||| | ||| || || |||||| || |
Sbjct 48184 GGCGAAAGCACCAGGTCTCTTGTTG-CCACCCTGATCTACGTATCTTGCAGTGTTATTGA 48242
Query 119221 ATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGA 119278
| ||||| ||||| || | || || | || ||| || || || ||| | |||
Sbjct 48243 AGACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGC 48302
Query 119279 CTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 119338
| | | || | || |||||||| | ||||||||| || ||| ||| |||||
Sbjct 48303 C--AGTAGCACGGATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCAT 48360
Query 119339 CGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAG 119398
|| || | |||| || ||||||| || || || || |||| | ||| |||
Sbjct 48361 GGCACAAGTCTTGAGGGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACGAG 48420
Query 119399 GAAGCAGCTCGACATTTGAGGCCTGGG-TGTACCAGCGTTGAAGAGAGTTGG 119449
|||||| ||| | || |||||||| ||| ||||| ||||||||||||||
Sbjct 48421 GAAGCAAGACGAGAGCTG-GGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGG 48471
>seq19
Length=350955
Score = 141 bits (156), Expect = 1e-28
Identities = 348/517 (67%), Gaps = 23/517 (4%)
Strand=Plus/Minus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| |||||||| ||||| ||||||||||| || |||||| |||||| |||||||||||
Sbjct 189843 GTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCAGACCGGGCATGAGACC 189784
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|||||||| | |||||| || | | || | ||| ||||||||| ||||| |||
Sbjct 189783 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCACTGAAGAAGATACCCTCAACAGC 189724
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGT-ATCAAACCACTTCAT 130203
||||| |||| ||||| | || |||| ||||| |||| ||| ||| | ||
Sbjct 189723 GGCGAAGGCAATAAGACGTTGGGCGAAGG---TGGACTTCTTGTCGGCAATCCAGTGCAG 189667
Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 130263
||||| | ||||| || ||| || || | ||||| || || | ||||| | |
Sbjct 189666 GGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCTCAATGGCATTGAAGAGATGTGT 189607
Query 130264 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGAC 130323
||| | | || || |||||||| | || ||||| || || || ||| ||||
Sbjct 189606 CTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAAGTCTCGGAGTGGAT 189547
Query 130324 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 130382
| | ||| || | ||| | ||||||| | || || || ||||| |||||
Sbjct 189546 GTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCTGGGATCTGGACCTCGC 189488
Query 130383 CTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 130439
| | | ||| | | || | ||||| ||||| || || || | || || || |
Sbjct 189487 CAG-AGAATCG--CTCGACAAGGTTCTCGTTGACAATGCCGTCAGATGCGGCGAAGAAGG 189431
Query 130440 CCAGGATAT---ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGT 130493
| ||||| | | | | |||||||| ||| ||||| | || | |||||||||
Sbjct 189430 CGAGGATGTGGGAGATGAAGAATTTCTCGTCA---TCGTTTAGGCGGTTGCTCCAGTCGT 189374
Query 130494 CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|||||||| || ||||| | |||||| || |||||
Sbjct 189373 GGAGATCCTTGGATAGATCAATCTCCTCGGCGGTCCA 189337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618431296127800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |