Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq122 315 8e-81 seq19 132 6e-26 >seq122 Length=136518 Score = 315 bits (348), Expect = 8e-81 Identities = 926/1400 (66%), Gaps = 29/1400 (2%) Strand=Plus/Minus Query 104214 TGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTG 104273 |||| | |||||| | ||| ||||||| ||||| |||| || || || || ||| Sbjct 48587 TGGAGAGACCACAGCATATGATCATGCGTGTGGCTGTCGGCATCTGGGGCGACGATGTTG 48528 Query 104274 ATTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACC 104331 | ||| | |||| ||| || ||||| ||| || |||| ||| || | || Sbjct 48527 AGAAGGTCATTCAGACCTACAACCTCATGTCTAGCAAA-TAC-TTCACTCATGCTTCCCC 48470 Query 104332 AACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAA 104391 ||| |||||||||||||| ||||| |||| | || ||||||||| ||| || Sbjct 48469 AACTCTCTTCAATGCTGGGACACCCCAGGCCCAGCTCTCGTCTTGCTTCCTCGTCGACAT 48410 Query 104392 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAA 104451 ||||| || || | |||||||| | || || | | ||||| ||||| || Sbjct 48409 GAAGGACGATAGCATTGAGGGTATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAA 48350 Query 104452 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCG 104511 | ||| || |||||||| | ||||||| | | || | | || ||| Sbjct 48349 GATGGCCGGTGGTATTGGTCTCAACATCCACCGCATCCGTGCTACTGGCTCATACATTGC 48290 Query 104512 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 104571 || || || || || | || ||| | || ||||| || || || || ||| || Sbjct 48289 TGGCACTAACGGCACCTCGAACGGCATTGTACCCATGCTACGTGTCTTCAATAACACTGC 48230 Query 104572 GCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGC 104627 | || ||| |||| | ||| | | | || || || |||| |||| || |||| Sbjct 48229 AAGATACGTAGATCAGGGTGG-CAACAAGAGACCTGGTGCTTTCGCCATCTACCTCGAGC 48171 Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687 | |||||| ||||| | | ||||||||||| | || ||||| || | ||||| | Sbjct 48170 CTTGGCACTCGGATGTTTTCGAGTTCCTTGATCTTCGAAAGAACCATGGCAAGGAGGAAG 48111 Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747 || ||||||||||||| |||||||||||||| |||||||||||||| | |||| Sbjct 48110 TTCGTGCCCGCGATCTCTTCCTGGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTTG 48051 Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807 || ||| ||| | ||| | ||| | ||||| || || |||||||| | || | Sbjct 48050 AGAAGAATGGAGAGTGGACCCTCATGTGTCCTAACGAGTGCCCTGGTCTAGCTGACGTTT 47991 Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC-- 104865 || || ||||| || ||||| ||| |||||||| | ||| |||| ||| | || Sbjct 47990 ATGGCGATGAGTTCGAGGCCCTGTACGAGAAGTACGAAGCAGAGGGTC--GCGGCCGCCA 47933 Query 104866 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924 || | | ||| | || | ||||| | || |||||| || |||| || |||||||| | Sbjct 47932 GAAGATTAAGGCT-CAGAAGCTGTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGAA 47874 Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984 || | |||||||||||| || ||| |||| |||||||| || |||||| | ||| Sbjct 47873 ATCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAATCTTGGTA 47814 Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044 || || || ||||| || || || ||| | || | | | | |||||| || Sbjct 47813 CTATTCGCAGCTCGAATCTTTGCACCGAGATCATTGAGTACTCCGCCCCTGATGAGGTGG 47754 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--AC 105102 |||| || ||| | || || |||| | || | ||| || | | | || ||| || Sbjct 47753 CTGTCTGCAACTTAGCTTCCCTCGCGTTGCCGTCCTTTGTTGA-CTATA-ACGAAGGCAC 47696 Query 105103 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162 | ||| | | || | || || ||||| || ||| | || | |||||| | Sbjct 47695 TTATGACTTCCAGAAGTTGCATGAGGTTACCCAAGTCGTCGTTCACAATTTGAACAGAAT 47636 Query 105163 TATTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221 ||||||| |||| ||||||||| ||| || ||||| || ||| ||||||||| Sbjct 47635 TATTGATGTCAATTATTACCCCGTCCCAGA-GGCCCGTAACAGCAACATGCGACACCGTC 47577 Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT 105280 | |||||||| |||||||||||||| || ||| |||| | | ||| || | ||| Sbjct 47576 CCATTGGTCTTGGTGTTCAGGGTCTTGCTGATACATTCTTGGCATTG-CGTATGCCTTTT 47518 Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340 || || || || | || | || || || || ||||| || || || ||||| Sbjct 47517 GAGTCACCAGAGGCTAGACAATTAAACAAGCAGATCTTCGAGACGATCTACCATGCCGC- 47459 Query 105341 CTTGA-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 ||||| ||| | ||| | || |||| || || || || |||| |||||||| Sbjct 47458 CTTGACTGCGTCCACGGAGATTGCCAAGGTCGAAGGCCCTTACTCTACCTACGAGGGTTC 47399 Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTCACT 105458 ||| | || || || | ||||||| || |||| |||| || | ||| | || | Sbjct 47398 TCCCGTCTCGCAGGGCATCCTTCAATACGACATGT-GGAATGTCACCCCATCGGATCTTT 47340 Query 105459 ACGACTGG-GAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517 |||||| ||| |||||||| | |||||| | || ||| | || ||||| | | Sbjct 47339 GGGACTGGACCAGC-CTCAAGGAGCAAATCAAGCAAAATGGTGTGCGCAACAGCTTGTTG 47281 Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577 | || || ||||| || ||| ||| | || ||||||||||| ||||| ||||| || Sbjct 47280 GTCGCCCCCATGCCCACGGCCAGCACATCCCAGATCTTGGGTAACAATGAGTGCTTCGAG 47221 Query 105578 CCCTACACGACGAACATCTA 105597 || ||||| | |||||||| Sbjct 47220 CCTTACACTTCCAACATCTA 47201 >seq19 Length=350955 Score = 132 bits (146), Expect = 6e-26 Identities = 348/518 (67%), Gaps = 25/518 (5%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497 ||||| || || ||| | ||||| || |||||| | |||| |||| | | |||| Sbjct 189337 TGGACCGCCGAGGAGATTGATCTATCCAAGGATCTCCACGACTGGAGCAACCGCCTAAAC 189396 Query 94498 GAAAATGAAAAGAAATTCATAAAAT---ACATCCTGGCATTCTTTGCTGGATCCGATGGA 94554 || ||| |||||||| | | | ||||||| || ||||| || | ||| || || Sbjct 189397 GA---TGACGAGAAATTCTTCATCTCCCACATCCTCGCCTTCTTCGCCGCATCTGACGGC 189453 Query 94555 ATTGTTTTTGAGAA---TATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGC 94610 ||||| ||||| | || | | | | | ||| ||||| || |||| | || || Sbjct 189454 ATTGTCAACGAGAACCTTGTCGAG--CGATTCT-CTGGCGAGGTCCAGATCC-CAGAGGC 189509 Query 94611 GAGATCCTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTA 94669 ||| |||||| | | ||| |||| ||| | | | || ||||| ||| Sbjct 189510 CCGATGCTTCTACGGCTTCCAGA-TCATGATGGAGAACATCCACTCCGAGACTTACTCCC 189568 Query 94670 AACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCC 94729 ||||| |||| || || ||||| ||| |||||| || ||||| | ||||| Sbjct 189569 TCCTCATTGACACCTACATCAAGGAGCCTGCCCAGAAGACACATCTCTTCAATGCCATTG 189628 Query 94730 AAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA-- 94786 | || |||| || || | ||||| || || ||||| || | ||| ||| |||| Sbjct 189629 AGACCATTCCTTGCATCCGCAAGAAGGCCGACTGGGCCCTGCACTGGATTGCCGACAAGA 189688 Query 94787 AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCT 94846 |||| |||| || | || || | || || || ||||||||||||||||||| Sbjct 189689 AGTCCA---CCTTCGCCCAACGTCTTATTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCA 189745 Query 94847 CTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 94906 ||| ||||| | || | |||||||||||||| ||||||||||| ||||| || Sbjct 189746 GTGGAGCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCT 189805 Query 94907 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||||| || ||||| ||||| ||||| || ||| Sbjct 189806 TCTCCAACGAACTCATCTCGCGTGATGAGGGTCTGCAC 189843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257118166200