Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq122 315 8e-81
seq19 132 6e-26
>seq122
Length=136518
Score = 315 bits (348), Expect = 8e-81
Identities = 926/1400 (66%), Gaps = 29/1400 (2%)
Strand=Plus/Minus
Query 104214 TGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTG 104273
|||| | |||||| | ||| ||||||| ||||| |||| || || || || |||
Sbjct 48587 TGGAGAGACCACAGCATATGATCATGCGTGTGGCTGTCGGCATCTGGGGCGACGATGTTG 48528
Query 104274 ATTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACC 104331
| ||| | |||| ||| || ||||| ||| || |||| ||| || | ||
Sbjct 48527 AGAAGGTCATTCAGACCTACAACCTCATGTCTAGCAAA-TAC-TTCACTCATGCTTCCCC 48470
Query 104332 AACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAA 104391
||| |||||||||||||| ||||| |||| | || ||||||||| ||| ||
Sbjct 48469 AACTCTCTTCAATGCTGGGACACCCCAGGCCCAGCTCTCGTCTTGCTTCCTCGTCGACAT 48410
Query 104392 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAA 104451
||||| || || | |||||||| | || || | | ||||| ||||| ||
Sbjct 48409 GAAGGACGATAGCATTGAGGGTATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAA 48350
Query 104452 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCG 104511
| ||| || |||||||| | ||||||| | | || | | || |||
Sbjct 48349 GATGGCCGGTGGTATTGGTCTCAACATCCACCGCATCCGTGCTACTGGCTCATACATTGC 48290
Query 104512 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 104571
|| || || || || | || ||| | || ||||| || || || || ||| ||
Sbjct 48289 TGGCACTAACGGCACCTCGAACGGCATTGTACCCATGCTACGTGTCTTCAATAACACTGC 48230
Query 104572 GCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGC 104627
| || ||| |||| | ||| | | | || || || |||| |||| || ||||
Sbjct 48229 AAGATACGTAGATCAGGGTGG-CAACAAGAGACCTGGTGCTTTCGCCATCTACCTCGAGC 48171
Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687
| |||||| ||||| | | ||||||||||| | || ||||| || | ||||| |
Sbjct 48170 CTTGGCACTCGGATGTTTTCGAGTTCCTTGATCTTCGAAAGAACCATGGCAAGGAGGAAG 48111
Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747
|| ||||||||||||| |||||||||||||| |||||||||||||| | ||||
Sbjct 48110 TTCGTGCCCGCGATCTCTTCCTGGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTTG 48051
Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807
|| ||| ||| | ||| | ||| | ||||| || || |||||||| | || |
Sbjct 48050 AGAAGAATGGAGAGTGGACCCTCATGTGTCCTAACGAGTGCCCTGGTCTAGCTGACGTTT 47991
Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC-- 104865
|| || ||||| || ||||| ||| |||||||| | ||| |||| ||| | ||
Sbjct 47990 ATGGCGATGAGTTCGAGGCCCTGTACGAGAAGTACGAAGCAGAGGGTC--GCGGCCGCCA 47933
Query 104866 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924
|| | | ||| | || | ||||| | || |||||| || |||| || |||||||| |
Sbjct 47932 GAAGATTAAGGCT-CAGAAGCTGTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGAA 47874
Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984
|| | |||||||||||| || ||| |||| |||||||| || |||||| | |||
Sbjct 47873 ATCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAATCTTGGTA 47814
Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044
|| || || ||||| || || || ||| | || | | | | |||||| ||
Sbjct 47813 CTATTCGCAGCTCGAATCTTTGCACCGAGATCATTGAGTACTCCGCCCCTGATGAGGTGG 47754
Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--AC 105102
|||| || ||| | || || |||| | || | ||| || | | | || ||| ||
Sbjct 47753 CTGTCTGCAACTTAGCTTCCCTCGCGTTGCCGTCCTTTGTTGA-CTATA-ACGAAGGCAC 47696
Query 105103 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162
| ||| | | || | || || ||||| || ||| | || | |||||| |
Sbjct 47695 TTATGACTTCCAGAAGTTGCATGAGGTTACCCAAGTCGTCGTTCACAATTTGAACAGAAT 47636
Query 105163 TATTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221
||||||| |||| ||||||||| ||| || ||||| || ||| |||||||||
Sbjct 47635 TATTGATGTCAATTATTACCCCGTCCCAGA-GGCCCGTAACAGCAACATGCGACACCGTC 47577
Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT 105280
| |||||||| |||||||||||||| || ||| |||| | | ||| || | |||
Sbjct 47576 CCATTGGTCTTGGTGTTCAGGGTCTTGCTGATACATTCTTGGCATTG-CGTATGCCTTTT 47518
Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340
|| || || || | || | || || || || ||||| || || || |||||
Sbjct 47517 GAGTCACCAGAGGCTAGACAATTAAACAAGCAGATCTTCGAGACGATCTACCATGCCGC- 47459
Query 105341 CTTGA-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399
||||| ||| | ||| | || |||| || || || || |||| ||||||||
Sbjct 47458 CTTGACTGCGTCCACGGAGATTGCCAAGGTCGAAGGCCCTTACTCTACCTACGAGGGTTC 47399
Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTCACT 105458
||| | || || || | ||||||| || |||| |||| || | ||| | || |
Sbjct 47398 TCCCGTCTCGCAGGGCATCCTTCAATACGACATGT-GGAATGTCACCCCATCGGATCTTT 47340
Query 105459 ACGACTGG-GAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517
|||||| ||| |||||||| | |||||| | || ||| | || ||||| | |
Sbjct 47339 GGGACTGGACCAGC-CTCAAGGAGCAAATCAAGCAAAATGGTGTGCGCAACAGCTTGTTG 47281
Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577
| || || ||||| || ||| ||| | || ||||||||||| ||||| ||||| ||
Sbjct 47280 GTCGCCCCCATGCCCACGGCCAGCACATCCCAGATCTTGGGTAACAATGAGTGCTTCGAG 47221
Query 105578 CCCTACACGACGAACATCTA 105597
|| ||||| | ||||||||
Sbjct 47220 CCTTACACTTCCAACATCTA 47201
>seq19
Length=350955
Score = 132 bits (146), Expect = 6e-26
Identities = 348/518 (67%), Gaps = 25/518 (5%)
Strand=Plus/Plus
Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497
||||| || || ||| | ||||| || |||||| | |||| |||| | | ||||
Sbjct 189337 TGGACCGCCGAGGAGATTGATCTATCCAAGGATCTCCACGACTGGAGCAACCGCCTAAAC 189396
Query 94498 GAAAATGAAAAGAAATTCATAAAAT---ACATCCTGGCATTCTTTGCTGGATCCGATGGA 94554
|| ||| |||||||| | | | ||||||| || ||||| || | ||| || ||
Sbjct 189397 GA---TGACGAGAAATTCTTCATCTCCCACATCCTCGCCTTCTTCGCCGCATCTGACGGC 189453
Query 94555 ATTGTTTTTGAGAA---TATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGC 94610
||||| ||||| | || | | | | | ||| ||||| || |||| | || ||
Sbjct 189454 ATTGTCAACGAGAACCTTGTCGAG--CGATTCT-CTGGCGAGGTCCAGATCC-CAGAGGC 189509
Query 94611 GAGATCCTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTA 94669
||| |||||| | | ||| |||| ||| | | | || ||||| |||
Sbjct 189510 CCGATGCTTCTACGGCTTCCAGA-TCATGATGGAGAACATCCACTCCGAGACTTACTCCC 189568
Query 94670 AACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCC 94729
||||| |||| || || ||||| ||| |||||| || ||||| | |||||
Sbjct 189569 TCCTCATTGACACCTACATCAAGGAGCCTGCCCAGAAGACACATCTCTTCAATGCCATTG 189628
Query 94730 AAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA-- 94786
| || |||| || || | ||||| || || ||||| || | ||| ||| ||||
Sbjct 189629 AGACCATTCCTTGCATCCGCAAGAAGGCCGACTGGGCCCTGCACTGGATTGCCGACAAGA 189688
Query 94787 AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCT 94846
|||| |||| || | || || | || || || |||||||||||||||||||
Sbjct 189689 AGTCCA---CCTTCGCCCAACGTCTTATTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCA 189745
Query 94847 CTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 94906
||| ||||| | || | |||||||||||||| ||||||||||| ||||| ||
Sbjct 189746 GTGGAGCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCT 189805
Query 94907 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||||||||| || ||||| ||||| ||||| || |||
Sbjct 189806 TCTCCAACGAACTCATCTCGCGTGATGAGGGTCTGCAC 189843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583257118166200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |