Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq41 275 2e-68
seq244 152 2e-31
seq169 107 6e-18
seq64 98.7 3e-15
>seq41
Length=250975
Score = 275 bits (304), Expect = 2e-68
Identities = 933/1448 (64%), Gaps = 8/1448 (1%)
Strand=Plus/Minus
Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256
|||| | ||||| || || || || || || || ||||| | ||| | | |||| |
Sbjct 184785 CCGCAGTCGGAATTGACTTGGGCACGACCTACTCGTGTGTAGGTGTCTTCCGCGATGACC 184726
Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316
| | ||||| || ||||| || ||||||||| | || || || || | ||| || || |
Sbjct 184725 GAATCGAAATCATCGCAAACGACCAAGGTAACCGGACCACCCCGTCCTTCGTGGCCTTCA 184666
Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376
| || || ||||| |||| |||||| | || || || || | |||| || || | |
Sbjct 184665 CGGACACGGAGCGACTGATCGGTGATGCCGCCAAGAACCAGGTTGCTATGAACCCCCACA 184606
Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAAT 349436
| || || || || |||||||| || |||||| ||| || || ||| |||
Sbjct 184605 ACACCGTCTTCGACGCTAAGCGTCTCATTGGTCGAAAATTCTCCGACCCTGAGGTTCAAG 184546
Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496
| || | || || || || || | || || | |||| || || || ||||| |
Sbjct 184545 CCGACATGAAGCACTTCCCCTTCAAGGTCATTG-AGAAGAA--TGGCAAGCCTATTATCG 184489
Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556
||||||| || || || || | || |||||| || || || || || || |||||
Sbjct 184488 AGGTTGAGTACAAGGGCGAGAAGAAGCAATTTACTCCTGAGGAGATCTCCTCTATGGTCC 184429
Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616
| || |||||||| | || || | ||| |||| | || || || |||| ||||
Sbjct 184428 TGACCAAGATGAAGGAGACCGCCGAGTCGTATCTAGGAGGTACTGTCACCAATGCCGTTA 184369
Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676
| || || || ||||| || || || | || || || || || || || || ||
Sbjct 184368 TCACCGTCCCGGCCTACTTCAACGACTCTCAACGACAAGCCACCAAGGACGCAGGTCTCA 184309
Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736
|||| || || || ||||| |||| ||||| || || || ||||| || || || || |
Sbjct 184308 TTGCTGGCTTGAACGTTCTCCGAATCATTAACGAGCCTACGGCTGCTGCCATCGCCTACG 184249
Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796
| ||||| || | | || || ||| |||| || || ||| | ||||||||||
Sbjct 184248 GTCTTGACAAGAAGGCCGAGGGTGAGCGAAACGTTCTGATCTTCGATCTTGGTGGTGGTA 184189
Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856
| || ||||| || || || || | || ||||| || || || || || | |||||||
Sbjct 184188 CCTTCGATGTCTCCCTTCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCTACTGCTG 184129
Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916
|||| || || | ||||| || || ||||| || || ||||| || || || || |
Sbjct 184128 GTGACACTCACTTGGGTGGTGAGGACTTTGACAACCGACTCGTCAACCACTTCGTCAACG 184069
Query 349917 AATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975
| || ||||| ||||| || | ||| | ||| || | || | || || ||
Sbjct 184068 AGTTCAAGCG-CAAGCACAAGAAGGATCTATCCACTAACGCTCGTGCTCTCCGACGTCTC 184010
Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035
|||| || ||||| ||||| |||||| || | || || || | || || || || ||
Sbjct 184009 CGAACCGCCTGTGAGCGTGCCAAGCGTACCCTTTCTTCGTCTGCACAGACTTCGATCGAG 183950
Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095
|| || || || || || | || |||| | || || || |||||||| || |||
Sbjct 183949 ATCGACTCCCTGTACGAAGGTATTGACTTCTACACTTCCATCACCCGTGCTCGATTCGAA 183890
Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155
|| | || |||||| || || | || || | ||||| || || || ||||
Sbjct 183889 GAGCTGTGCCAGGATCTCTTCCGATCCACTATCCAGCCTGTCGATCGTGTCTTGGCAGAT 183830
Query 350156 GCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATT 350215
|| || || ||| ||| | | || | || | || ||||| || || |||||
Sbjct 183829 GCCAAGATCGACAAGTCCCAGGTCCACGAGATCGTCCTTGTCGGTGGCTCCACCCGTATC 183770
Query 350216 CCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATT 350275
|| |||| || | | | || | || || || || || || | ||| ||
Sbjct 183769 CCCCGCATTCAGAAGCTCATTACCGACTACTTCAACGGTAAGGAGCCCAACAAATCCATC 183710
Query 350276 AATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAAT 350335
|| || ||||| ||||| || || ||||| || || ||||| |||| | ||||| |
Sbjct 183709 AACCCCGATGAGGCTGTCGCCTACGGTGCCGCCGTCCAGGCTGCTATCCTCTCTGGTGAC 183650
Query 350336 AAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGA 350392
| || || || | | || | | || || ||||| | || | || || ||
Sbjct 183649 ACCAGCTCCAAGTCGACCAACGAGATCCTGCTTCTCGATGTCGCCCCGTTGTCTCTCGGT 183590
Query 350393 TTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACA 350452
| || || |||||| | |||||| || || || | || | ||| | || ||
Sbjct 183589 ATCGAGACCGCTGGTGGTATGATGACTAAGCTCATCCCCCGCAACACCACTATCCCCACC 183530
Query 350453 AAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTA 350512
|| ||||| | || || || || | || || ||||| | || |||||||||
Sbjct 183529 AAGAAGTCGGAGGTCTTCTCCACTTTCTCCGACAACCAGCCTGGTGTGCTCATTCAAGTA 183470
Query 350513 TTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGT 350572
| || ||||| ||| ||||| || || || || || || | || || | |
Sbjct 183469 TACGAGGGTGAGCGTCAACGCACCAAGGACAACAACCTGCTCGGTAAGTTCGAGCTTACT 183410
Query 350573 GAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCA 350632
| ||| || || || | || || ||||||||||| ||| | |||||| ||||| |
Sbjct 183409 GGAATCCCGCCCGCACCGCGTGGTGTCCCTCAGATTGAGGTCACCTTCGATCTTGATGCC 183350
Query 350633 AATGGTAT 350640
|| |||||
Sbjct 183349 AACGGTAT 183342
>seq244
Length=60485
Score = 152 bits (168), Expect = 2e-31
Identities = 163/213 (77%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
||||| | || || || || || || || ||||| ||||| || || || ||||||
Sbjct 26627 AGAACCAAGTGGAGCGTGGATTCCTTCTGGATATTGTAATCGCTCAAGGTGCGACCATCT 26568
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||| ||||| |||||||||||||| |||||||| ||||| || |||
Sbjct 26567 TCCAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGGAATGCCTTCCTTGTCC 26508
Query 140646 TGAATTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGT 140704
||||| || ||| || || || || || | || || | ||||||||| || |||| ||
Sbjct 26507 TGAATCTT-GCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAGGGTAATAGT 26449
Query 140705 CTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||||| || | ||| || ||||||||||||||
Sbjct 26448 CTTTCCCGTCAATGTCTTGACAAAAATCTGCAT 26416
Score = 129 bits (142), Expect = 2e-24
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | ||| |||||||| || ||||| ||||| || ||||| || || ||
Sbjct 26418 CATACCACCACGAAGTCTGAGAACAAGGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTC 26359
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
| ||||| ||||| || | || || || |||||||| || ||||| || || ||
Sbjct 26358 GCTCAGCGTTCGGCCATCCTCCAACTGCTTACCCGCAAAGATAAGTCGTTGTTGGTCGGG 26299
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| ||||| || || ||||| || || | ||| || || || || | || || | ||
Sbjct 26298 CGGGATTCCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATTGTGTCCGAAGACTC 26239
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || | ||||| ||||| || || || || || || |||||
Sbjct 26238 CACCTCAAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 26188
Score = 114 bits (126), Expect = 4e-20
Identities = 159/223 (71%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||||||||| || | | || || || |||||||| || || || ||||| || |
Sbjct 26194 TTTGCATACCACCGCGGAGACGGAGGACGAGGTGAAGAGTCGATTCCTTCTGAATGTTGT 26135
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | ||||| ||||| ||||| || || || || || || | || ||||| |
Sbjct 26134 AGTCGGACAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGT 26075
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
|||||||||| || || || || || || || | || ||||| || || | || || |
Sbjct 26074 CAGGAGGAATACCCTCCTTGTCTTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACG 26015
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| || ||||| || | ||||||||||| || || || ||
Sbjct 26014 ACTCGACCTCAAGGGTGATGGTCTTTCCGGTAAGGGTCTTGAC 25972
>seq169
Length=99563
Score = 107 bits (118), Expect = 6e-18
Identities = 328/498 (66%), Gaps = 17/498 (3%)
Strand=Plus/Plus
Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669
||||||||||| ||||| ||||| || || ||| ||| ||| || || || ||||||
Sbjct 11928 GCTGTTATTACGGTACCTGCCTACTTCAACGATAACCAACGTCAGGCCACCAAGGATGCT 11987
Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729
|| |||| ||||| | || || || | || || || || |||||||| || || ||
Sbjct 11988 GGTTCCATTTCGGGGCTTAACGTGCTCCGTATCATCAACGAGCCCACTGCCGCTGCTATC 12047
Query 349730 GCATATGGGCTTG---ATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786
|| || || | | ||| | | | || | || ||| | || || | || |
Sbjct 12048 GCCTACGGCTTAGGCTCTAACAAGTCTAACAAGGAGCGCAATGTGCTCATCTACGACCTT 12107
Query 349787 GGTGGTGGTACTTTTGATGTATCACTAC-TAACACTTGAAGAGGGAATTTTTGAAGTTAA 349845
||||||||||| || ||||| || || | ||||| || | | || |||| ||||
Sbjct 12108 GGTGGTGGTACCTTCGATGTGTCCCTTCTTAACA-TTCAGGGTGGTGTTTTCACTGTTAG 12166
Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905
|| ||||| |||||||| ||||||||||| | ||||| || | || || |||
Sbjct 12167 GGCTACTGCCGGTGATACCCATCTTGGTGGTCAGGATTTCGACACCAACCTTCTTGAGCA 12226
Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATAT---TGGAGATAATCCTAGAG 349961
| || ||||| |||| |||| | || | ||||| ||| | | || |||
Sbjct 12227 CTGCAAGAAGGAATTCCAGCG-CAAGACCAAGAAGGATATCTCTGGCG---ACCCGCGAG 12282
Query 349962 CAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCC 350021
| | || | || ||||||| || || ||||||||||| | | || | | | |
Sbjct 12283 CTCTTCGAAGACTTCGAACTGCTTGCGAGCGTGCTAAGCGAACTCTGTCCAATGGTGCAC 12342
Query 350022 AAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTT--TTCATCTATTAC 350079
| ||| | ||||| || || || ||| || ||| | |||||||| | || || ||
Sbjct 12343 AGACCACCATTGAGATCGACTCGCTTTTCGACGGCGAGGATTTCTTCCTCCA--GATCAC 12400
Query 350080 ACGTGCTCGGTTTGAAGA 350097
|||||||| || || ||
Sbjct 12401 CCGTGCTCGTTTCGAGGA 12418
>seq64
Length=205105
Score = 98.7 bits (108), Expect = 3e-15
Identities = 182/266 (68%), Gaps = 6/266 (2%)
Strand=Plus/Minus
Query 378211 GCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATT 378270
||||| | ||| || || || |||||||||| || || || |||||||||||
Sbjct 166534 GCTTTGACAAGACGACGTTGGATGTAACCAGTTTCGGCCGTCTTGACGGCAGTATCAATA 166475
Query 378271 AAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATA 378330
| ||| |||||||| |||| || |||||| | ||||| | || || | |||| | |
Sbjct 166474 AGACCTTCACGACCAGCCATGGCGTGGAAGTAGAATTCCGAGGGTGTCAACCCACGTAGA 166415
Query 378331 AATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGT 378390
|||| |||| | || || | || | || || | ||||| || || | ||||||
Sbjct 166414 TATGAGTTCTCGACGAACCCACGAGCCTCAGGGGAGTAATCATCCTTGGTGAAGTGAGGT 166355
Query 378391 AATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTGTTGAC---CA 378447
||||| |||| || ||| || | || || ||||| || ||||| |||| || | ||
Sbjct 166354 AATGTTCGATACTTAAAGCCGAAGGGGATACGTTTGCCTTCAACGATCTGCTGGCCGACA 166295
Query 378448 AGTGCAGAAACCATTTGAGCAATATT 378473
|| |||| ||| |||| ||| ||
Sbjct 166294 AGAGCAG---TCATCTGAGAAATGTT 166272
Score = 91.5 bits (100), Expect = 4e-13
Identities = 101/134 (75%), Gaps = 3/134 (2%)
Strand=Plus/Minus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| || |||||| | ||||| ||| |||| |||| ||||| || |||||||| ||
Sbjct 167311 CGGGGAACACCAAGAGTAACGTTC---TTAGCAGCAATACCAGTGAAATGGAAAGTGTTT 167255
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
||||| | || || | || ||||||||||||||||| || | || |||||||||||
Sbjct 167254 AGAGTCATCTGCGTCGCAGGTTCACCAATTGACTGCGCAGCTAATACACCAACCATTTCA 167195
Query 377578 CCAGGATTGACAAT 377591
||||| || || ||
Sbjct 167194 CCAGGGTTCACCAT 167181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515244595830515
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