Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq41 275 2e-68 seq244 152 2e-31 seq169 107 6e-18 seq64 98.7 3e-15 >seq41 Length=250975 Score = 275 bits (304), Expect = 2e-68 Identities = 933/1448 (64%), Gaps = 8/1448 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| | ||||| || || || || || || || ||||| | ||| | | |||| | Sbjct 184785 CCGCAGTCGGAATTGACTTGGGCACGACCTACTCGTGTGTAGGTGTCTTCCGCGATGACC 184726 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| || ||||| || ||||||||| | || || || || | ||| || || | Sbjct 184725 GAATCGAAATCATCGCAAACGACCAAGGTAACCGGACCACCCCGTCCTTCGTGGCCTTCA 184666 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 | || || ||||| |||| |||||| | || || || || | |||| || || | | Sbjct 184665 CGGACACGGAGCGACTGATCGGTGATGCCGCCAAGAACCAGGTTGCTATGAACCCCCACA 184606 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAAT 349436 | || || || || |||||||| || |||||| ||| || || ||| ||| Sbjct 184605 ACACCGTCTTCGACGCTAAGCGTCTCATTGGTCGAAAATTCTCCGACCCTGAGGTTCAAG 184546 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 | || | || || || || || | || || | |||| || || || ||||| | Sbjct 184545 CCGACATGAAGCACTTCCCCTTCAAGGTCATTG-AGAAGAA--TGGCAAGCCTATTATCG 184489 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 ||||||| || || || || | || |||||| || || || || || || ||||| Sbjct 184488 AGGTTGAGTACAAGGGCGAGAAGAAGCAATTTACTCCTGAGGAGATCTCCTCTATGGTCC 184429 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || |||||||| | || || | ||| |||| | || || || |||| |||| Sbjct 184428 TGACCAAGATGAAGGAGACCGCCGAGTCGTATCTAGGAGGTACTGTCACCAATGCCGTTA 184369 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | || || || ||||| || || || | || || || || || || || || || Sbjct 184368 TCACCGTCCCGGCCTACTTCAACGACTCTCAACGACAAGCCACCAAGGACGCAGGTCTCA 184309 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 |||| || || || ||||| |||| ||||| || || || ||||| || || || || | Sbjct 184308 TTGCTGGCTTGAACGTTCTCCGAATCATTAACGAGCCTACGGCTGCTGCCATCGCCTACG 184249 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | ||||| || | | || || ||| |||| || || ||| | |||||||||| Sbjct 184248 GTCTTGACAAGAAGGCCGAGGGTGAGCGAAACGTTCTGATCTTCGATCTTGGTGGTGGTA 184189 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 | || ||||| || || || || | || ||||| || || || || || | ||||||| Sbjct 184188 CCTTCGATGTCTCCCTTCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCTACTGCTG 184129 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 |||| || || | ||||| || || ||||| || || ||||| || || || || | Sbjct 184128 GTGACACTCACTTGGGTGGTGAGGACTTTGACAACCGACTCGTCAACCACTTCGTCAACG 184069 Query 349917 AATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 | || ||||| ||||| || | ||| | ||| || | || | || || || Sbjct 184068 AGTTCAAGCG-CAAGCACAAGAAGGATCTATCCACTAACGCTCGTGCTCTCCGACGTCTC 184010 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 |||| || ||||| ||||| |||||| || | || || || | || || || || || Sbjct 184009 CGAACCGCCTGTGAGCGTGCCAAGCGTACCCTTTCTTCGTCTGCACAGACTTCGATCGAG 183950 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || || || || || | || |||| | || || || |||||||| || ||| Sbjct 183949 ATCGACTCCCTGTACGAAGGTATTGACTTCTACACTTCCATCACCCGTGCTCGATTCGAA 183890 Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 || | || |||||| || || | || || | ||||| || || || |||| Sbjct 183889 GAGCTGTGCCAGGATCTCTTCCGATCCACTATCCAGCCTGTCGATCGTGTCTTGGCAGAT 183830 Query 350156 GCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATT 350215 || || || ||| ||| | | || | || | || ||||| || || ||||| Sbjct 183829 GCCAAGATCGACAAGTCCCAGGTCCACGAGATCGTCCTTGTCGGTGGCTCCACCCGTATC 183770 Query 350216 CCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATT 350275 || |||| || | | | || | || || || || || || | ||| || Sbjct 183769 CCCCGCATTCAGAAGCTCATTACCGACTACTTCAACGGTAAGGAGCCCAACAAATCCATC 183710 Query 350276 AATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAAT 350335 || || ||||| ||||| || || ||||| || || ||||| |||| | ||||| | Sbjct 183709 AACCCCGATGAGGCTGTCGCCTACGGTGCCGCCGTCCAGGCTGCTATCCTCTCTGGTGAC 183650 Query 350336 AAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGA 350392 | || || || | | || | | || || ||||| | || | || || || Sbjct 183649 ACCAGCTCCAAGTCGACCAACGAGATCCTGCTTCTCGATGTCGCCCCGTTGTCTCTCGGT 183590 Query 350393 TTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACA 350452 | || || |||||| | |||||| || || || | || | ||| | || || Sbjct 183589 ATCGAGACCGCTGGTGGTATGATGACTAAGCTCATCCCCCGCAACACCACTATCCCCACC 183530 Query 350453 AAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTA 350512 || ||||| | || || || || | || || ||||| | || ||||||||| Sbjct 183529 AAGAAGTCGGAGGTCTTCTCCACTTTCTCCGACAACCAGCCTGGTGTGCTCATTCAAGTA 183470 Query 350513 TTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGT 350572 | || ||||| ||| ||||| || || || || || || | || || | | Sbjct 183469 TACGAGGGTGAGCGTCAACGCACCAAGGACAACAACCTGCTCGGTAAGTTCGAGCTTACT 183410 Query 350573 GAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCA 350632 | ||| || || || | || || ||||||||||| ||| | |||||| ||||| | Sbjct 183409 GGAATCCCGCCCGCACCGCGTGGTGTCCCTCAGATTGAGGTCACCTTCGATCTTGATGCC 183350 Query 350633 AATGGTAT 350640 || ||||| Sbjct 183349 AACGGTAT 183342 >seq244 Length=60485 Score = 152 bits (168), Expect = 2e-31 Identities = 163/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| | || || || || || || || ||||| ||||| || || || |||||| Sbjct 26627 AGAACCAAGTGGAGCGTGGATTCCTTCTGGATATTGTAATCGCTCAAGGTGCGACCATCT 26568 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||| ||||| |||||||||||||| |||||||| ||||| || ||| Sbjct 26567 TCCAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGGAATGCCTTCCTTGTCC 26508 Query 140646 TGAATTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGT 140704 ||||| || ||| || || || || || | || || | ||||||||| || |||| || Sbjct 26507 TGAATCTT-GCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAGGGTAATAGT 26449 Query 140705 CTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || | ||| || |||||||||||||| Sbjct 26448 CTTTCCCGTCAATGTCTTGACAAAAATCTGCAT 26416 Score = 129 bits (142), Expect = 2e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | ||| |||||||| || ||||| ||||| || ||||| || || || Sbjct 26418 CATACCACCACGAAGTCTGAGAACAAGGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTC 26359 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | ||||| ||||| || | || || || |||||||| || ||||| || || || Sbjct 26358 GCTCAGCGTTCGGCCATCCTCCAACTGCTTACCCGCAAAGATAAGTCGTTGTTGGTCGGG 26299 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || ||||| || || ||||| || || | ||| || || || || | || || | || Sbjct 26298 CGGGATTCCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATTGTGTCCGAAGACTC 26239 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| ||||| || || || || || || ||||| Sbjct 26238 CACCTCAAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 26188 Score = 114 bits (126), Expect = 4e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| || | | || || || |||||||| || || || ||||| || | Sbjct 26194 TTTGCATACCACCGCGGAGACGGAGGACGAGGTGAAGAGTCGATTCCTTCTGAATGTTGT 26135 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | ||||| ||||| ||||| || || || || || || | || ||||| | Sbjct 26134 AGTCGGACAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGT 26075 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| || || || || || || || | || ||||| || || | || || | Sbjct 26074 CAGGAGGAATACCCTCCTTGTCTTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACG 26015 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || ||||| || | ||||||||||| || || || || Sbjct 26014 ACTCGACCTCAAGGGTGATGGTCTTTCCGGTAAGGGTCTTGAC 25972 >seq169 Length=99563 Score = 107 bits (118), Expect = 6e-18 Identities = 328/498 (66%), Gaps = 17/498 (3%) Strand=Plus/Plus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||||||||| ||||| ||||| || || ||| ||| ||| || || || |||||| Sbjct 11928 GCTGTTATTACGGTACCTGCCTACTTCAACGATAACCAACGTCAGGCCACCAAGGATGCT 11987 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||| ||||| | || || || | || || || || |||||||| || || || Sbjct 11988 GGTTCCATTTCGGGGCTTAACGTGCTCCGTATCATCAACGAGCCCACTGCCGCTGCTATC 12047 Query 349730 GCATATGGGCTTG---ATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || || || | | ||| | | | || | || ||| | || || | || | Sbjct 12048 GCCTACGGCTTAGGCTCTAACAAGTCTAACAAGGAGCGCAATGTGCTCATCTACGACCTT 12107 Query 349787 GGTGGTGGTACTTTTGATGTATCACTAC-TAACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 ||||||||||| || ||||| || || | ||||| || | | || |||| |||| Sbjct 12108 GGTGGTGGTACCTTCGATGTGTCCCTTCTTAACA-TTCAGGGTGGTGTTTTCACTGTTAG 12166 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || ||||| |||||||| ||||||||||| | ||||| || | || || ||| Sbjct 12167 GGCTACTGCCGGTGATACCCATCTTGGTGGTCAGGATTTCGACACCAACCTTCTTGAGCA 12226 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATAT---TGGAGATAATCCTAGAG 349961 | || ||||| |||| |||| | || | ||||| ||| | | || ||| Sbjct 12227 CTGCAAGAAGGAATTCCAGCG-CAAGACCAAGAAGGATATCTCTGGCG---ACCCGCGAG 12282 Query 349962 CAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCC 350021 | | || | || ||||||| || || ||||||||||| | | || | | | | Sbjct 12283 CTCTTCGAAGACTTCGAACTGCTTGCGAGCGTGCTAAGCGAACTCTGTCCAATGGTGCAC 12342 Query 350022 AAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTT--TTCATCTATTAC 350079 | ||| | ||||| || || || ||| || ||| | |||||||| | || || || Sbjct 12343 AGACCACCATTGAGATCGACTCGCTTTTCGACGGCGAGGATTTCTTCCTCCA--GATCAC 12400 Query 350080 ACGTGCTCGGTTTGAAGA 350097 |||||||| || || || Sbjct 12401 CCGTGCTCGTTTCGAGGA 12418 >seq64 Length=205105 Score = 98.7 bits (108), Expect = 3e-15 Identities = 182/266 (68%), Gaps = 6/266 (2%) Strand=Plus/Minus Query 378211 GCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATT 378270 ||||| | ||| || || || |||||||||| || || || ||||||||||| Sbjct 166534 GCTTTGACAAGACGACGTTGGATGTAACCAGTTTCGGCCGTCTTGACGGCAGTATCAATA 166475 Query 378271 AAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATA 378330 | ||| |||||||| |||| || |||||| | ||||| | || || | |||| | | Sbjct 166474 AGACCTTCACGACCAGCCATGGCGTGGAAGTAGAATTCCGAGGGTGTCAACCCACGTAGA 166415 Query 378331 AATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGT 378390 |||| |||| | || || | || | || || | ||||| || || | |||||| Sbjct 166414 TATGAGTTCTCGACGAACCCACGAGCCTCAGGGGAGTAATCATCCTTGGTGAAGTGAGGT 166355 Query 378391 AATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTGTTGAC---CA 378447 ||||| |||| || ||| || | || || ||||| || ||||| |||| || | || Sbjct 166354 AATGTTCGATACTTAAAGCCGAAGGGGATACGTTTGCCTTCAACGATCTGCTGGCCGACA 166295 Query 378448 AGTGCAGAAACCATTTGAGCAATATT 378473 || |||| ||| |||| ||| || Sbjct 166294 AGAGCAG---TCATCTGAGAAATGTT 166272 Score = 91.5 bits (100), Expect = 4e-13 Identities = 101/134 (75%), Gaps = 3/134 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | ||||| ||| |||| |||| ||||| || |||||||| || Sbjct 167311 CGGGGAACACCAAGAGTAACGTTC---TTAGCAGCAATACCAGTGAAATGGAAAGTGTTT 167255 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 ||||| | || || | || ||||||||||||||||| || | || ||||||||||| Sbjct 167254 AGAGTCATCTGCGTCGCAGGTTCACCAATTGACTGCGCAGCTAATACACCAACCATTTCA 167195 Query 377578 CCAGGATTGACAAT 377591 ||||| || || || Sbjct 167194 CCAGGGTTCACCAT 167181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515244595830515