Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq122 197 2e-45
seq87 172 6e-38
seq244 167 3e-36
seq5 140 4e-28
seq35 91.5 2e-13
>seq122
Length=136518
Score = 197 bits (218), Expect = 2e-45
Identities = 905/1420 (64%), Gaps = 28/1420 (2%)
Strand=Plus/Plus
Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGA-TACAGGTTTGTAGTGTAAGGCTCAAATGCCTC 80414
||||| || |||||| || || ||| || | ||| | |||||||||||| || |||
Sbjct 47174 AACTCGCCAGCGAGGACACGGCG-AGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTC 47232
Query 80415 GTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATT 80474
||||| || | |||||| | ||||| ||||| ||||| ||| ||||||||| ||
Sbjct 47233 ATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGACCAACAAGCTGTT 47292
Query 80475 CCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGACCAAAAATCAACC--CCAACG 80532
|||| || | | |||||| | ||| | | ||| | | ||| || | |
Sbjct 47293 GCGCACACCATTTTGCTTGATTTGCTC-CTTGAGGCTGGTCCAGTCCCAAAGATCCGATG 47351
Query 80533 CTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACG 80590
||||| ||||||||||| || | |||||||| ||| | ||||| ||| || | |
Sbjct 47352 GGGTGACATTCCACATGTCGTATTGAAGGATGCCCTGCGAGACGGGAGAACCCTCGTAGG 47411
Query 80591 TCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAA 80650
| ||| ||||| || |||||| | ||| ||| | | | ||| || || || |
Sbjct 47412 TAGAGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGACGCAGTCAAGGCGGCATGGTAGA 47471
Query 80651 TGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCA 80710
| ||| |||| |||||| | | |||| ||| || || | || | ||
Sbjct 47472 TCGTCTCGAAGATCTGCTTGTTTAATTGTCTAGCCTCTGGTGACTCAAAAGGCATACGCA 47531
Query 80711 TCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGT 80770
|| ||| ||||| || |||||||| || | | || || ||||| ||| |||
Sbjct 47532 ATGCCAAGAATGTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCATGT 47591
Query 80771 TCGATCGCTCGG-CCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTG 80829
| | | ||| |||| || | |||||| | || ||| || | | ||||| |||
Sbjct 47592 T-GCTGTTACGGGCCTCTGGGACGGGGTAATAATTGACATCAATAATTCTGTTCAAATTG 47650
Query 80830 CGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA------TTGGTTCCCC 80883
| || || | ||||| ||||| | ||||| ||||| | || |||
Sbjct 47651 TGAACGACGACTTGGGTAACCTCATGCAACTTCTGGAAGTCATAAGTGCCTTCGTTATAG 47710
Query 80884 TTCACAAATGCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATC 80942
| ||||| | ||| || || ||||| || | ||||| || |||||||| |||| |
Sbjct 47711 TCAACAAAGGACGGCAACGCG-AGGGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGC 47769
Query 80943 TGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTG 81002
| |||| | ||| || ||||| | ||| || ||| ||||| || || |||||
Sbjct 47770 GGAGTACTCAATGATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCTTCTG 47829
Query 81003 GTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062
||| |||| |||||| |||||||| |||| | || | || ||||| |||
Sbjct 47830 GTTACTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTG 47889
Query 81063 TGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTC 81122
| || ||| ||||||| ||| | || | ||||| | | || |||| || ||
Sbjct 47890 AGCCTCGAGAATGGCGTACCACAGCTTCTGAGCCTTAATCTTCTGGCGGCCGCGACCCTC 47949
Query 81123 GGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGG 81182
|| | ||||| |||| | ||||||| | || | || |||| || | ||
Sbjct 47950 TGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAGACCAGG 48009
Query 81183 GCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGC 81242
|||||||||||| ||||| ||| ||| || | ||||| ||| ||||||||
Sbjct 48010 GCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTCATGAAGAG 48069
Query 81243 GTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTT 81302
||||| |||||||| || ||| || |||||| || | ||||| | || |||||
Sbjct 48070 ATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTT 48129
Query 81303 GAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGAT 81362
|| | || || || || | | |||| ||||| ||||| || || | |||||
Sbjct 48130 CTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAGATGGCGAA 48189
Query 81363 CG-AC-----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATAC 81416
| || | |||| ||||||||| | ||||| | ||||| || || ||
Sbjct 48190 AGCACCAGGTCTCTTG---TTGCCACCCTGATCTACGTATCTTGCAGTGTTATTGAAGAC 48246
Query 81417 ACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTT 81476
||| | ||| || | || || | || ||||| || || | || || || |
Sbjct 48247 ACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGT 48306
Query 81477 GGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536
|| || | | ||| ||||| || ||||| | | ||| || ||| |||||
Sbjct 48307 AGCACGGATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCACA 48366
Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596
|| | ||| || || || ||||| |||||||| | |||||||| | | ||| ||
Sbjct 48367 AGTCTTGAGGGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACGAGGAAGCA 48426
Query 81597 GCTTGACATCTGAGGGCT-TTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGA 81655
|| | ||| || || || || |||||||| || ||||||| || ||| |||
Sbjct 48427 AGACGAGAGCTG-GGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGGGGAAGCATGAGTGA 48485
Query 81656 AATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAA 81715
| || | | ||||| |||| ||||| | |||| || |||||| || |
Sbjct 48486 AGTATTTGCTAGACATGAGGTTGTAGGTCTGAATGACCTTCTCAACATCGTCGCCCCAGA 48545
Query 81716 TACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755
| |||| ||| |||||||| | ||| | ||| || ||||
Sbjct 48546 TGCCGACAGCCACACGCATGATCATATGCTGTGGTCTCTC 48585
>seq87
Length=177310
Score = 172 bits (190), Expect = 6e-38
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| ||||| |||||||| || || ||||||||||| || |||||||| |||||
Sbjct 65422 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCT 65481
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
| || | ||| | ||| | ||| | || || |||||||||||||| ||||| || |||
Sbjct 65482 AGCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCCGAC 65541
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||||| || || || || || ||||||||||| || | ||||| || | |||||
Sbjct 65542 CAGCAGCGACTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACTCTCTCCGACTAC 65601
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| ||||| ||| |||||||| ||| | || || || |||||
Sbjct 65602 AACATCCAGAAGGAGAGCACCCTTCATCTCGTCCTCCGCCTCCGTGGTGG 65651
>seq244
Length=60485
Score = 167 bits (184), Expect = 3e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| |||||||| ||||| || || |||||||| ||||| || | ||| |
Sbjct 25972 GTCAAGACCCTTACCGGAAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGAC 26031
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| | ||| | || || || ||||||||||| |||||||| ||||||||||| | |||
Sbjct 26032 AATGTTAAGTCGAAGATCCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGCGATTGATT 26091
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| || || ||||| || ||||||| || ||||| | ||||| || | || ||||||
Sbjct 26092 TTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTGTCCGACTACAACATTCAGAAGGAA 26151
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||||||| || ||| | ||||| ||||||||
Sbjct 26152 TCGACTCTTCACCTCGTCCTCCGTCTCCGCGGTGG 26186
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || || |||||||| || ||||||||||| || ||
Sbjct 25669 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTTGAGGTCGAATCCTCG 25728
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| | || || |||||||||||||| |||||||| |||||
Sbjct 25729 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAA 25788
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | ||||| ||||| |||||||||||||| | ||| || || | ||||| ||
Sbjct 25789 CAGCGATTGATTTTCGCTGGAAAGCAACTCGAGGACGGTCGCACTCTTTCCGACTACAAC 25848
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| ||| || || || ||| | ||||| || |||||
Sbjct 25849 ATTCAGAAGGAGAGCACCCTCCACCTTGTCCTCCGTCTGCGTGGTGG 25895
Score = 152 bits (168), Expect = 6e-32
Identities = 174/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||||||||| | || || ||||||||||| || || ||||| ||
Sbjct 26416 ATGCAGATTTTTGTCAAGACATTGACGGGAAAGACTATTACCCTAGAAGTTGAATCTTCC 26475
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||| || |||||||||||||| || |||||||| || |||
Sbjct 26476 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 26535
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|| ||||| || || ||||||||||| || || |||| ||| ||| | ||| || || ||
Sbjct 26536 CAACGTCTCATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCTTGAGC-GATTACAA 26594
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| |||| ||||||||||| || || | || | ||||| || || |||||
Sbjct 26595 TATCCAGAAGGAATCCACGCTCCACTTGGTTCTCCGTCTCCGTGGAGGACA 26645
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| || ||||||||||| || ||||||||||| |||||
Sbjct 26188 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACGATCACTCTTGAGGTGGAGTCTTCG 26247
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | || | || || ||||||||||||||||| || || |||||
Sbjct 26248 GACACAATCGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCAA 26307
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|| || || || ||||| |||||||| | ||||||| || || || ||| ||||| ||
Sbjct 26308 CAACGACTTATCTTTGCGGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGC-GACTACAA 26366
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || ||||| || || || | | ||||| |||||
Sbjct 26367 CATTCAGAAGGAGTCAACTCTGCACCTTGTTCTCAGACTTCGTGGTGG 26414
>seq5
Length=467666
Score = 140 bits (154), Expect = 4e-28
Identities = 169/229 (74%), Gaps = 1/229 (0%)
Strand=Plus/Plus
Query 27405 AATGCAA-ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAG 27463
||| ||| | ||| || ||||| ||||| || |||||||| || || ||||| |||||
Sbjct 48464 AATTCAATAGCTTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTCTT 48523
Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||| | ||| | ||| | || || |||||||||||||| ||||| || ||||
Sbjct 48524 CCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACC 48583
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
| |||||||| || || || || |||||||| ||||| | || || || | ||||| |
Sbjct 48584 AACAGCGTCTGATCTTCGCCGGCAAGCAACTTGAGGACGGCCGAACTCTTTCCGACTACA 48643
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||| || || ||||| || || || ||| | ||||| || || ||
Sbjct 48644 ACATCCAGAAAGAGTCCACCCTCCACCTCGTCCTCCGTCTCCGTGGCGG 48692
>seq35
Length=266941
Score = 91.5 bits (100), Expect = 2e-13
Identities = 290/446 (65%), Gaps = 4/446 (1%)
Strand=Plus/Plus
Query 31959 CAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATA 32018
|| ||| |||||||| || | |||||| | |||||| ||||| ||||| || ||
Sbjct 180887 CATGCGATCCATTCCCTCGGTTGTCGACGGCTTAAAGCCTGGTCAGCGGAAGGTCATTTA 180946
Query 32019 CGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGT 32078
|| || || || || ||| | |||| |||||| | || | || || ||
Sbjct 180947 TGCTTGTCTTAAACGAAATCTGGTCAAAGACAAGAAGGTTATCGAATTGGCAGGTTATGT 181006
Query 32079 GGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCT 32138
| || || || ||||||||||| || || | ||| || ||| || ||| || ||
Sbjct 181007 CTCTGAACAGACAGCCTATCACCATGGTGAAGTGTCTCTGCAGCAGACTATTATCGGTCT 181066
Query 32139 TGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGG 32198
|| |||||||| |||||| | ||||| | |||| ||||| || ||| | || ||
Sbjct 181067 AGCCCAGAACTTCGTCGGTTCCAATAATGTCAACTGCCTCGAACCCAGCGGAAACTTCGG 181126
Query 32199 GACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGC 32258
| || || || ||||| |||||||| ||| | || || ||| || |||||| |
Sbjct 181127 TTCTCGACTTGCGGGTGGTTCTGATGCTGCTAGCGCTCGATATATCCATACTCGTCTCTC 181186
Query 32259 ACC-TTCGACGCGCAAG-ATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTT 32316
|| |||| | || | |||||| || ||| || | | | | || | |
Sbjct 181187 TCCATTCGCCCGGCGTGTCTTTTCG--CCTCTGGATGAGCCTATTTTAGACTATCAGGTC 181244
Query 32317 GATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTG 32376
|| ||||| || || | || ||| |||| || || | || ||| ||||||||
Sbjct 181245 GAAGACGGAAAGAGGATAGAACCGAAAGTCTATGTACCTGTCATCCCTATGGTCTTGGTG 181304
Query 32377 AACGGTGCAGAAGGCATCGGAACGGG 32402
|||||||| || || || || |||||
Sbjct 181305 AACGGTGCTGATGGTATTGGTACGGG 181330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570306799915600
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