Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq122 197 2e-45 seq87 172 6e-38 seq244 167 3e-36 seq5 140 4e-28 seq35 91.5 2e-13 >seq122 Length=136518 Score = 197 bits (218), Expect = 2e-45 Identities = 905/1420 (64%), Gaps = 28/1420 (2%) Strand=Plus/Plus Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGA-TACAGGTTTGTAGTGTAAGGCTCAAATGCCTC 80414 ||||| || |||||| || || ||| || | ||| | |||||||||||| || ||| Sbjct 47174 AACTCGCCAGCGAGGACACGGCG-AGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTC 47232 Query 80415 GTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATT 80474 ||||| || | |||||| | ||||| ||||| ||||| ||| ||||||||| || Sbjct 47233 ATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGACCAACAAGCTGTT 47292 Query 80475 CCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGACCAAAAATCAACC--CCAACG 80532 |||| || | | |||||| | ||| | | ||| | | ||| || | | Sbjct 47293 GCGCACACCATTTTGCTTGATTTGCTC-CTTGAGGCTGGTCCAGTCCCAAAGATCCGATG 47351 Query 80533 CTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACG 80590 ||||| ||||||||||| || | |||||||| ||| | ||||| ||| || | | Sbjct 47352 GGGTGACATTCCACATGTCGTATTGAAGGATGCCCTGCGAGACGGGAGAACCCTCGTAGG 47411 Query 80591 TCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAA 80650 | ||| ||||| || |||||| | ||| ||| | | | ||| || || || | Sbjct 47412 TAGAGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGACGCAGTCAAGGCGGCATGGTAGA 47471 Query 80651 TGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCA 80710 | ||| |||| |||||| | | |||| ||| || || | || | || Sbjct 47472 TCGTCTCGAAGATCTGCTTGTTTAATTGTCTAGCCTCTGGTGACTCAAAAGGCATACGCA 47531 Query 80711 TCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGT 80770 || ||| ||||| || |||||||| || | | || || ||||| ||| ||| Sbjct 47532 ATGCCAAGAATGTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCATGT 47591 Query 80771 TCGATCGCTCGG-CCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTG 80829 | | | ||| |||| || | |||||| | || ||| || | | ||||| ||| Sbjct 47592 T-GCTGTTACGGGCCTCTGGGACGGGGTAATAATTGACATCAATAATTCTGTTCAAATTG 47650 Query 80830 CGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA------TTGGTTCCCC 80883 | || || | ||||| ||||| | ||||| ||||| | || ||| Sbjct 47651 TGAACGACGACTTGGGTAACCTCATGCAACTTCTGGAAGTCATAAGTGCCTTCGTTATAG 47710 Query 80884 TTCACAAATGCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATC 80942 | ||||| | ||| || || ||||| || | ||||| || |||||||| |||| | Sbjct 47711 TCAACAAAGGACGGCAACGCG-AGGGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGC 47769 Query 80943 TGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTG 81002 | |||| | ||| || ||||| | ||| || ||| ||||| || || ||||| Sbjct 47770 GGAGTACTCAATGATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCTTCTG 47829 Query 81003 GTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062 ||| |||| |||||| |||||||| |||| | || | || ||||| ||| Sbjct 47830 GTTACTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTG 47889 Query 81063 TGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTC 81122 | || ||| ||||||| ||| | || | ||||| | | || |||| || || Sbjct 47890 AGCCTCGAGAATGGCGTACCACAGCTTCTGAGCCTTAATCTTCTGGCGGCCGCGACCCTC 47949 Query 81123 GGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGG 81182 || | ||||| |||| | ||||||| | || | || |||| || | || Sbjct 47950 TGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAGACCAGG 48009 Query 81183 GCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGC 81242 |||||||||||| ||||| ||| ||| || | ||||| ||| |||||||| Sbjct 48010 GCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTCATGAAGAG 48069 Query 81243 GTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTT 81302 ||||| |||||||| || ||| || |||||| || | ||||| | || ||||| Sbjct 48070 ATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTT 48129 Query 81303 GAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGAT 81362 || | || || || || | | |||| ||||| ||||| || || | ||||| Sbjct 48130 CTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAGATGGCGAA 48189 Query 81363 CG-AC-----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATAC 81416 | || | |||| ||||||||| | ||||| | ||||| || || || Sbjct 48190 AGCACCAGGTCTCTTG---TTGCCACCCTGATCTACGTATCTTGCAGTGTTATTGAAGAC 48246 Query 81417 ACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTT 81476 ||| | ||| || | || || | || ||||| || || | || || || | Sbjct 48247 ACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGT 48306 Query 81477 GGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536 || || | | ||| ||||| || ||||| | | ||| || ||| ||||| Sbjct 48307 AGCACGGATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCACA 48366 Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596 || | ||| || || || ||||| |||||||| | |||||||| | | ||| || Sbjct 48367 AGTCTTGAGGGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACGAGGAAGCA 48426 Query 81597 GCTTGACATCTGAGGGCT-TTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGA 81655 || | ||| || || || || |||||||| || ||||||| || ||| ||| Sbjct 48427 AGACGAGAGCTG-GGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGGGGAAGCATGAGTGA 48485 Query 81656 AATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAA 81715 | || | | ||||| |||| ||||| | |||| || |||||| || | Sbjct 48486 AGTATTTGCTAGACATGAGGTTGTAGGTCTGAATGACCTTCTCAACATCGTCGCCCCAGA 48545 Query 81716 TACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755 | |||| ||| |||||||| | ||| | ||| || |||| Sbjct 48546 TGCCGACAGCCACACGCATGATCATATGCTGTGGTCTCTC 48585 >seq87 Length=177310 Score = 172 bits (190), Expect = 6e-38 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || ||||||||||| || |||||||| ||||| Sbjct 65422 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCT 65481 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||| | ||| | ||| | || || |||||||||||||| ||||| || ||| Sbjct 65482 AGCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCCGAC 65541 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| || || || || || ||||||||||| || | ||||| || | ||||| Sbjct 65542 CAGCAGCGACTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACTCTCTCCGACTAC 65601 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| |||||||| ||| | || || || ||||| Sbjct 65602 AACATCCAGAAGGAGAGCACCCTTCATCTCGTCCTCCGCCTCCGTGGTGG 65651 >seq244 Length=60485 Score = 167 bits (184), Expect = 3e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| |||||||| ||||| || || |||||||| ||||| || | ||| | Sbjct 25972 GTCAAGACCCTTACCGGAAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGAC 26031 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| | || || || ||||||||||| |||||||| ||||||||||| | ||| Sbjct 26032 AATGTTAAGTCGAAGATCCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGCGATTGATT 26091 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| || ||||||| || ||||| | ||||| || | || |||||| Sbjct 26092 TTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTGTCCGACTACAACATTCAGAAGGAA 26151 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||||||| || ||| | ||||| |||||||| Sbjct 26152 TCGACTCTTCACCTCGTCCTCCGTCTCCGCGGTGG 26186 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || ||||||||||| || || Sbjct 25669 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTTGAGGTCGAATCCTCG 25728 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||| | || || |||||||||||||| |||||||| ||||| Sbjct 25729 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAA 25788 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| ||||| |||||||||||||| | ||| || || | ||||| || Sbjct 25789 CAGCGATTGATTTTCGCTGGAAAGCAACTCGAGGACGGTCGCACTCTTTCCGACTACAAC 25848 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||| || || || ||| | ||||| || ||||| Sbjct 25849 ATTCAGAAGGAGAGCACCCTCCACCTTGTCCTCCGTCTGCGTGGTGG 25895 Score = 152 bits (168), Expect = 6e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| | || || ||||||||||| || || ||||| || Sbjct 26416 ATGCAGATTTTTGTCAAGACATTGACGGGAAAGACTATTACCCTAGAAGTTGAATCTTCC 26475 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||| || |||||||||||||| || |||||||| || ||| Sbjct 26476 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 26535 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || ||||| || || ||||||||||| || || |||| ||| ||| | ||| || || || Sbjct 26536 CAACGTCTCATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCTTGAGC-GATTACAA 26594 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | |||| ||||||||||| || || | || | ||||| || || ||||| Sbjct 26595 TATCCAGAAGGAATCCACGCTCCACTTGGTTCTCCGTCTCCGTGGAGGACA 26645 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || ||||||||||| || ||||||||||| ||||| Sbjct 26188 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACGATCACTCTTGAGGTGGAGTCTTCG 26247 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || | || || ||||||||||||||||| || || ||||| Sbjct 26248 GACACAATCGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCAA 26307 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || || || || ||||| |||||||| | ||||||| || || || ||| ||||| || Sbjct 26308 CAACGACTTATCTTTGCGGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGC-GACTACAA 26366 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||| || || || | | ||||| ||||| Sbjct 26367 CATTCAGAAGGAGTCAACTCTGCACCTTGTTCTCAGACTTCGTGGTGG 26414 >seq5 Length=467666 Score = 140 bits (154), Expect = 4e-28 Identities = 169/229 (74%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 27405 AATGCAA-ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAG 27463 ||| ||| | ||| || ||||| ||||| || |||||||| || || ||||| ||||| Sbjct 48464 AATTCAATAGCTTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTCTT 48523 Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| | ||| | || || |||||||||||||| ||||| || |||| Sbjct 48524 CCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACC 48583 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 | |||||||| || || || || |||||||| ||||| | || || || | ||||| | Sbjct 48584 AACAGCGTCTGATCTTCGCCGGCAAGCAACTTGAGGACGGCCGAACTCTTTCCGACTACA 48643 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| || || ||||| || || || ||| | ||||| || || || Sbjct 48644 ACATCCAGAAAGAGTCCACCCTCCACCTCGTCCTCCGTCTCCGTGGCGG 48692 >seq35 Length=266941 Score = 91.5 bits (100), Expect = 2e-13 Identities = 290/446 (65%), Gaps = 4/446 (1%) Strand=Plus/Plus Query 31959 CAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATA 32018 || ||| |||||||| || | |||||| | |||||| ||||| ||||| || || Sbjct 180887 CATGCGATCCATTCCCTCGGTTGTCGACGGCTTAAAGCCTGGTCAGCGGAAGGTCATTTA 180946 Query 32019 CGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGT 32078 || || || || || ||| | |||| |||||| | || | || || || Sbjct 180947 TGCTTGTCTTAAACGAAATCTGGTCAAAGACAAGAAGGTTATCGAATTGGCAGGTTATGT 181006 Query 32079 GGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCT 32138 | || || || ||||||||||| || || | ||| || ||| || ||| || || Sbjct 181007 CTCTGAACAGACAGCCTATCACCATGGTGAAGTGTCTCTGCAGCAGACTATTATCGGTCT 181066 Query 32139 TGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGG 32198 || |||||||| |||||| | ||||| | |||| ||||| || ||| | || || Sbjct 181067 AGCCCAGAACTTCGTCGGTTCCAATAATGTCAACTGCCTCGAACCCAGCGGAAACTTCGG 181126 Query 32199 GACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGC 32258 | || || || ||||| |||||||| ||| | || || ||| || |||||| | Sbjct 181127 TTCTCGACTTGCGGGTGGTTCTGATGCTGCTAGCGCTCGATATATCCATACTCGTCTCTC 181186 Query 32259 ACC-TTCGACGCGCAAG-ATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTT 32316 || |||| | || | |||||| || ||| || | | | | || | | Sbjct 181187 TCCATTCGCCCGGCGTGTCTTTTCG--CCTCTGGATGAGCCTATTTTAGACTATCAGGTC 181244 Query 32317 GATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTG 32376 || ||||| || || | || ||| |||| || || | || ||| |||||||| Sbjct 181245 GAAGACGGAAAGAGGATAGAACCGAAAGTCTATGTACCTGTCATCCCTATGGTCTTGGTG 181304 Query 32377 AACGGTGCAGAAGGCATCGGAACGGG 32402 |||||||| || || || || ||||| Sbjct 181305 AACGGTGCTGATGGTATTGGTACGGG 181330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306799915600