Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq112 93.3 3e-14 >seq112 Length=148559 Score = 93.3 bits (102), Expect = 3e-14 Identities = 199/296 (67%), Gaps = 6/296 (2%) Strand=Plus/Minus Query 30062 ACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118 ||||| ||||| | ||||| |||||||| || || |||| || ||| || Sbjct 93151 ACGTAGAACTGTGCAAACATG---TGGCACGGCGGGAGCACCATCTTCTTCAGGTCCTTC 93095 Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30178 |||||||| ||| | | ||| ||||| | || | |||||||||| | || | | Sbjct 93094 GGGTTCCACGCGGAAAGGATCATGCGGCGATCGTACGGGTTGTTCCGCAGCTTGTGTATG 93035 Query 30179 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30238 ||| |||||| || ||| || | |||||||| | || || ||||| Sbjct 93034 ACGTCGGCCAGCTGGTCGTAACCCTGGCCGGTGTAGTCTGTCTTCGCATCGACATACTCA 92975 Query 30239 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30298 || |||||||| | ||||||||| ||||| ||||| |||||||| || | || | || | Sbjct 92974 GCGCCGAAATGGCGCCACTGGAAGCCGTAAACCGGACCCAGGTCGCCGACCTCGCGGTCC 92915 Query 30299 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30354 | ||| ||||| | || || | ||| || ||| ||||||||||||| || Sbjct 92914 GTCAGTCCCAAGTTGTCGAGGAACTCGCGGGATCCATTGCCGTCCCAGATCTTGAC 92859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406307899286460