Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq244 122 8e-23 >seq244 Length=60485 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || |||||| | || |||||||| || ||| | || Sbjct 25669 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTTGAGGTCGAATCCTCG 25728 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || || ||||| || || || || ||||| ||| Sbjct 25729 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAA 25788 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| || || ||| | || ||| || || ||||||| |||||| Sbjct 25789 CAGCGATTGATTTTCGCTGGAAAGCAACTCGAGGACGGTCGCACTCTTTCCGACTACAAC 25848 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||| ||| | || | || | ||| |||| |||||||| Sbjct 25849 ATTCAGAAGGAGAGCACCCTCCACCTTGTCCTCCGTCTGCGTGGTGGCAT 25898 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || ||||||||| | || |||||||| ||||| | || Sbjct 26188 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACGATCACTCTTGAGGTGGAGTCTTCG 26247 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| || || || ||||| || || || || ||||| ||| Sbjct 26248 GACACAATCGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCAA 26307 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTC-CGATTACAA 27166 || || | || | || || || || ||||| || | ||| || | ||| ||||| Sbjct 26308 CAACGACTTATCTTTGCGGGTAAGCAGTTGGAGGATGGC-CGAACGCTGAGCGACTACAA 26366 Query 27167 CATTCAAAAGGAGTCGAC 27184 |||||| |||||||| || Sbjct 26367 CATTCAGAAGGAGTCAAC 26384 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || || ||||| ||| | || || ||||| || || |||||||| | || || Sbjct 25972 GTCAAGACCCTTACCGGAAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGAC 26031 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | || || || || |||||||| || || || || || || || ||||| || || Sbjct 26032 AATGTTAAGTCGAAGATCCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGCGATTGATT 26091 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||||||||| || | || || | ||| | ||||| ||||||||||| ||||| Sbjct 26092 TTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTGTCCGACTACAACATTCAGAAGGAA 26151 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| | || | || | ||| | || ||||| || Sbjct 26152 TCGACTCTTCACCTCGTCCTCCGTCTCCGCGGTGGTAT 26189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434915654577600