Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq112 95.1 1e-14
>seq112
Length=148559
Score = 95.1 bits (104), Expect = 1e-14
Identities = 201/295 (68%), Gaps = 4/295 (1%)
Strand=Plus/Plus
Query 34325 GTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCT 34384
|| ||||||||||||| | || || || || || || ||||| ||| | |
Sbjct 92859 GTCAAGATCTGGGACGGCAATGGATCCCGCGAGTTCCTCGACAACTTGGGACTGACGGAC 92918
Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444
|| |||| |||||| |||| ||||| ||||| ||||||||| | || || || || |||
Sbjct 92919 CGCGAGGTCGGCGACCTGGGTCCGGTTTACGGCTTCCAGTGGCGCCATTTCGGCGCTGAG 92978
Query 34445 TATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT 34503
||| | | |||||| | ||||| | || ||||| ||||||||| |||| ||
Sbjct 92979 TAT-GTCGATGCGAAGACAGACTACACCGGCCAGGGTTACGACCAGCTGGCCGACGTCAT 93037
Query 34504 CGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563
||| || | ||||| | || | | || | | | |||||||||||||||
Sbjct 93038 ACACAAGCTGCGGAACAACCCGTACGATCGCCGCATGATCCTTTCCGCGTGGAACCCGAA 93097
Query 34564 GGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT 34617
||| || ||||| |||||| |||||||||| | ||| || ||||||||
Sbjct 93098 GGACCTGAAGAAGATGGTGCTCCCGCCGTGCCACA-TGTTTGCACAGTTCTACGT 93151
Score = 95.1 bits (104), Expect = 1e-14
Identities = 201/295 (68%), Gaps = 4/295 (1%)
Strand=Plus/Minus
Query 6728 ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
|||||||| || ||| | |||||||||| |||||| ||||| || ||||||||
Sbjct 93151 ACGTAGAACTGTGCAAACA-TGTGGCACGGCGGGAGCACCATCTTCTTCAGGTCCTTCGG 93093
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
|||||||||| | | | || | | || | ||||| | || ||| || ||
Sbjct 93092 GTTCCACGCGGAAAGGATCATGCGGCGATCGTACGGGTTGTTCCGCAGCTTGTGTATGAC 93033
Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905
|| ||||||||| ||||| || | ||||| | |||||| | | |||||| |
Sbjct 93032 GTCGGCCAGCTGGTCGTAACCCTGGCCGGTGTAGTCTGTCTTCGCATCGAC-ATACTCAG 92974
Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965
| || || || | ||||||||| ||||| ||||| |||| |||||| |||| || |
Sbjct 92973 CGCCGAAATGGCGCCACTGGAAGCCGTAAACCGGACCCAGGTCGCCGACCTCGCGGTCCG 92914
Query 6966 GGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCAC 7020
| ||| ||||| || || || || || || | ||||||||||||| ||
Sbjct 92913 TCAGTCCCAAGTTGTCGAGGAACTCGCGGGATCCATTGCCGTCCCAGATCTTGAC 92859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448259570343600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |