Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq122 244 1e-59 >seq122 Length=136518 Score = 244 bits (270), Expect = 1e-59 Identities = 1200/1884 (64%), Gaps = 58/1884 (3%) Strand=Plus/Plus Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828 ||||| ||| | || ||||| || || | || || | || |||||| || |||||||| Sbjct 46810 TTCTTGATCGACAGTGAACTGGATAGGTGCAGCAGCAGCTTGTGTACGGAGGTAGTACAT 46869 Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888 ||||| || || || || |||| ||| |||||||||||| || | ||| | | Sbjct 46870 GCCAGTCTTCAGGCCAAGCTTCCAGCCGGTGAAATGCATGCTGGTGATCTTGCCCATAGT 46929 Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948 || || || || ||||| | || || || || ||||| || || | ||||| Sbjct 46930 GGGTTCCCTCATGTGGATATTTAGTGATTGGGACTGGTCAATGAACGCACCACGGTCAGC 46989 Query 76949 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008 ||||| | | || ||| ||| | |||||||| | || ||| ||| ||||| Sbjct 46990 GGCCATCTGGACAACGGTTCGTTGGGATATTTCCCAGACGGTCTTGTAAAGAGCCTTGAT 47049 Query 77009 ATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTT 77065 |||| | |||| ||| | | || ||||| ||||| || || | || || ||||| Sbjct 47050 ATCAGCAGGAATGTTGGGGATGTTCTGAATTGAACCGCCCTCGGCAATGATACGGTTCTT 47109 Query 77066 TATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125 || |||| ||| | | | || | | | || | || ||||| | Sbjct 47110 CATGCTATCAGACCAGAGACCCATGTCAACAAGGTCCTTGAGCAACCAGGGGTTAACGAC 47169 Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185 || || || |||| | || | |||| ||| || || || || || || | | Sbjct 47170 CTGGAACTCGCCAGCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCA 47229 Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245 |||||||| ||||| || || | || || || ||||| || || ||||| || || Sbjct 47230 CTCATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGACCAACAAGCT 47289 Query 77246 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 77305 || | | ||||| | |||||| || || || |||| ||||||||||| || Sbjct 47290 GTTGCGCACACCATTTTGCTTGATTTGCTCCTTGAGGCTGGTCCAGTCCCAAAGATCCGA 47349 Query 77306 AGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAG-CATATGATCCATTAT 77364 || |||| ||| | |||||||| || || || | | || | || || | | Sbjct 47350 TGGGGTGACATTCCACATGTCGTATTGAAGGATGCCCTG-CGAGACGGGAGAACCCTCGT 47408 Query 77365 ATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAAT 77424 | || ||||| ||||| | || | || ||| ||| || | | | Sbjct 47409 AGGTAGAGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGACGCAGTCAAGGCGGCATGGT 47468 Query 77425 AAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAAT 77484 | || || ||||| |||| ||| || | | | || || ||||| || | Sbjct 47469 AGATCGTCTCGAAGATCTGCTTGTTTAATTGTCTAGCCTCTGGTGACTCAAAAGGCATAC 47528 Query 77485 GTAA----AAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGT 77540 | || |||||| | ||| || | |||||||| |||| |||||| || | ||| Sbjct 47529 GCAATGCCAAGAAT----GTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGT 47584 Query 77541 CTCTTATTGGAAATTTTA---GCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTA 77597 | | | ||| | ||| || ||||| | || |||||||| | || |||||| | Sbjct 47585 CGCATGTTGC---TGTTACGGGCCTCTGGGACGGGGTAATAATTGACATCAATAATTCTG 47641 Query 77598 TTGAGATTTCTAACAACTACTT---TAACCACGTCCTTTAGTTTAAGAAAATCAAATCTT 77654 || | ||| ||| || |||| ||||| | | | | || | || ||| | | Sbjct 47642 TTCAAATTGTGAACGACGACTTGGGTAACCTCATGC---AACTTCTGGAAGTCATAAGTG 47698 Query 77655 CCATC--TATA----ACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACC 77708 || || |||| ||||| ||| || | || |||| || || || || ||| Sbjct 47699 CCTTCGTTATAGTCAACAAAGGACGGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACC 47758 Query 77709 TCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGA-TAGTGCC 77767 |||| || | || || | || |||||||| || ||||| | | | || |||| || Sbjct 47759 TCATCAGGGGCGGAGTACTCAATGATCTCGGTGCAAAGATT-CGAGCTGCGAATAGTACC 47817 Query 77768 CAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGAGTCCTTATAAAGAATAAACGGAGTCC 77826 ||||| | ||||| ||||| ||||| ||| ||||| ||||| || || ||| | | Sbjct 47818 AAGATTCTTCTGGTTACTCTTGCGGTTGCAGTGA-TCCTTGTAAAGCATGAAGGGATTTC 47876 Query 77827 CGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGAT 77885 | || ||| |||| | |||| ||| | | ||| | | ||| ||| || ||| | Sbjct 47877 CAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACA-GCTTCTGAGCCTTAATCTTCTGG 47935 Query 77886 TTGTATCGCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAA 77943 | || | |||| ||| || | ||| | ||| || || ||||| || ||| Sbjct 47936 CGGCCGCGACCCTCTGCTTCGTACTTCTCGTACAGGGCC--TCGAACTCATCGCCATAAA 47993 Query 77944 CATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAA 78003 | ||| | | |||||||| || || || ||||| | | ||| || |||| | || || Sbjct 47994 CGTCAGCTAGACCAGGGCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAA 48053 Query 78004 CTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTT 78063 | |||||||| ||||||||||| ||||| ||||| | || ||||| |||| | | || Sbjct 48054 CACGTTTCATGAAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTT 48113 Query 78064 CTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTT 78123 | || || || |||||| |||||| || ||||| | || ||| || ||||| || | Sbjct 48114 CCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCT 48173 Query 78124 CTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGG 78183 | || || || || | | | ||||||| || || || |||||||||| ||||| || | Sbjct 48174 CGAGGTAGATGGCGAAAGCACCAGGTCTCTTGTTGCCACCCTGATCTACGTATCTTGCAG 48233 Query 78184 TGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAA 78243 ||||||| | || | | ||| || | ||| ||||| || || || || || |||| || Sbjct 48234 TGTTATTGAAGACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAA 48293 Query 78244 TATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAG 78303 | || ||| | || || || ||| | || || || || |||||||| | Sbjct 48294 TGTATGAGCCAGTAGCACGGATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGG 48353 Query 78304 ATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363 | || | || ||| || | || |||||||||||||| || || || ||| |||||| Sbjct 48354 AGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGT 48413 Query 78364 TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAG 78423 | || || || || | || || || || ||||| || | || || | Sbjct 48414 CGACGAGGAAGCAAGACGAGAGCTGGGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGGGG 48473 Query 78424 ATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCT---- 78479 | ||||| || || |||| ||| | || ||||| || | ||| | |||| Sbjct 48474 AAGCATGAGTGAAGTATTTGCTAGACATGAGGTTGTAGGTCTGAATGAC--CTTCTCAAC 48531 Query 78480 AT-GTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAA 78537 || ||| || |||| || || || |||||||| | ||||||||| ||||| || | Sbjct 48532 ATCGTCGCCCCAGATG----CCGACAGCCACACGCATGATCATATGCTGTGGTCTCTCCA 48587 Query 78538 CCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 78597 | |||| | | | || | | ||| ||| |||||||| || || || || || | Sbjct 48588 CGATCTTGTCGTCAAGCTTAAGTAGGTAAGATCGCTCCAAAGTCTTGAAGCCGAAGTATT 48647 Query 78598 TGTA--TGAAAAGTCTCTCTCGTA 78619 ||| ||||| ||||| || || Sbjct 48648 GGTAGTTGAAA--TCTCTGTCATA 48669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664414903200