Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq122 244 1e-59
>seq122
Length=136518
Score = 244 bits (270), Expect = 1e-59
Identities = 1200/1884 (64%), Gaps = 58/1884 (3%)
Strand=Plus/Plus
Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828
||||| ||| | || ||||| || || | || || | || |||||| || ||||||||
Sbjct 46810 TTCTTGATCGACAGTGAACTGGATAGGTGCAGCAGCAGCTTGTGTACGGAGGTAGTACAT 46869
Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888
||||| || || || || |||| ||| |||||||||||| || | ||| | |
Sbjct 46870 GCCAGTCTTCAGGCCAAGCTTCCAGCCGGTGAAATGCATGCTGGTGATCTTGCCCATAGT 46929
Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948
|| || || || ||||| | || || || || ||||| || || | |||||
Sbjct 46930 GGGTTCCCTCATGTGGATATTTAGTGATTGGGACTGGTCAATGAACGCACCACGGTCAGC 46989
Query 76949 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008
||||| | | || ||| ||| | |||||||| | || ||| ||| |||||
Sbjct 46990 GGCCATCTGGACAACGGTTCGTTGGGATATTTCCCAGACGGTCTTGTAAAGAGCCTTGAT 47049
Query 77009 ATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTT 77065
|||| | |||| ||| | | || ||||| ||||| || || | || || |||||
Sbjct 47050 ATCAGCAGGAATGTTGGGGATGTTCTGAATTGAACCGCCCTCGGCAATGATACGGTTCTT 47109
Query 77066 TATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125
|| |||| ||| | | | || | | | || | || ||||| |
Sbjct 47110 CATGCTATCAGACCAGAGACCCATGTCAACAAGGTCCTTGAGCAACCAGGGGTTAACGAC 47169
Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185
|| || || |||| | || | |||| ||| || || || || || || | |
Sbjct 47170 CTGGAACTCGCCAGCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCA 47229
Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245
|||||||| ||||| || || | || || || ||||| || || ||||| || ||
Sbjct 47230 CTCATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGACCAACAAGCT 47289
Query 77246 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 77305
|| | | ||||| | |||||| || || || |||| ||||||||||| ||
Sbjct 47290 GTTGCGCACACCATTTTGCTTGATTTGCTCCTTGAGGCTGGTCCAGTCCCAAAGATCCGA 47349
Query 77306 AGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAG-CATATGATCCATTAT 77364
|| |||| ||| | |||||||| || || || | | || | || || | |
Sbjct 47350 TGGGGTGACATTCCACATGTCGTATTGAAGGATGCCCTG-CGAGACGGGAGAACCCTCGT 47408
Query 77365 ATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAAT 77424
| || ||||| ||||| | || | || ||| ||| || | | |
Sbjct 47409 AGGTAGAGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGACGCAGTCAAGGCGGCATGGT 47468
Query 77425 AAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAAT 77484
| || || ||||| |||| ||| || | | | || || ||||| || |
Sbjct 47469 AGATCGTCTCGAAGATCTGCTTGTTTAATTGTCTAGCCTCTGGTGACTCAAAAGGCATAC 47528
Query 77485 GTAA----AAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGT 77540
| || |||||| | ||| || | |||||||| |||| |||||| || | |||
Sbjct 47529 GCAATGCCAAGAAT----GTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGT 47584
Query 77541 CTCTTATTGGAAATTTTA---GCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTA 77597
| | | ||| | ||| || ||||| | || |||||||| | || |||||| |
Sbjct 47585 CGCATGTTGC---TGTTACGGGCCTCTGGGACGGGGTAATAATTGACATCAATAATTCTG 47641
Query 77598 TTGAGATTTCTAACAACTACTT---TAACCACGTCCTTTAGTTTAAGAAAATCAAATCTT 77654
|| | ||| ||| || |||| ||||| | | | | || | || ||| | |
Sbjct 47642 TTCAAATTGTGAACGACGACTTGGGTAACCTCATGC---AACTTCTGGAAGTCATAAGTG 47698
Query 77655 CCATC--TATA----ACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACC 77708
|| || |||| ||||| ||| || | || |||| || || || || |||
Sbjct 47699 CCTTCGTTATAGTCAACAAAGGACGGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACC 47758
Query 77709 TCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGA-TAGTGCC 77767
|||| || | || || | || |||||||| || ||||| | | | || |||| ||
Sbjct 47759 TCATCAGGGGCGGAGTACTCAATGATCTCGGTGCAAAGATT-CGAGCTGCGAATAGTACC 47817
Query 77768 CAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGAGTCCTTATAAAGAATAAACGGAGTCC 77826
||||| | ||||| ||||| ||||| ||| ||||| ||||| || || ||| | |
Sbjct 47818 AAGATTCTTCTGGTTACTCTTGCGGTTGCAGTGA-TCCTTGTAAAGCATGAAGGGATTTC 47876
Query 77827 CGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGAT 77885
| || ||| |||| | |||| ||| | | ||| | | ||| ||| || ||| |
Sbjct 47877 CAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACA-GCTTCTGAGCCTTAATCTTCTGG 47935
Query 77886 TTGTATCGCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAA 77943
| || | |||| ||| || | ||| | ||| || || ||||| || |||
Sbjct 47936 CGGCCGCGACCCTCTGCTTCGTACTTCTCGTACAGGGCC--TCGAACTCATCGCCATAAA 47993
Query 77944 CATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAA 78003
| ||| | | |||||||| || || || ||||| | | ||| || |||| | || ||
Sbjct 47994 CGTCAGCTAGACCAGGGCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAA 48053
Query 78004 CTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTT 78063
| |||||||| ||||||||||| ||||| ||||| | || ||||| |||| | | ||
Sbjct 48054 CACGTTTCATGAAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTT 48113
Query 78064 CTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTT 78123
| || || || |||||| |||||| || ||||| | || ||| || ||||| || |
Sbjct 48114 CCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCT 48173
Query 78124 CTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGG 78183
| || || || || | | | ||||||| || || || |||||||||| ||||| || |
Sbjct 48174 CGAGGTAGATGGCGAAAGCACCAGGTCTCTTGTTGCCACCCTGATCTACGTATCTTGCAG 48233
Query 78184 TGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAA 78243
||||||| | || | | ||| || | ||| ||||| || || || || || |||| ||
Sbjct 48234 TGTTATTGAAGACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAA 48293
Query 78244 TATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAG 78303
| || ||| | || || || ||| | || || || || |||||||| |
Sbjct 48294 TGTATGAGCCAGTAGCACGGATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGG 48353
Query 78304 ATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363
| || | || ||| || | || |||||||||||||| || || || ||| ||||||
Sbjct 48354 AGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGT 48413
Query 78364 TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAG 78423
| || || || || | || || || || ||||| || | || || |
Sbjct 48414 CGACGAGGAAGCAAGACGAGAGCTGGGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGGGG 48473
Query 78424 ATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCT---- 78479
| ||||| || || |||| ||| | || ||||| || | ||| | ||||
Sbjct 48474 AAGCATGAGTGAAGTATTTGCTAGACATGAGGTTGTAGGTCTGAATGAC--CTTCTCAAC 48531
Query 78480 AT-GTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAA 78537
|| ||| || |||| || || || |||||||| | ||||||||| ||||| || |
Sbjct 48532 ATCGTCGCCCCAGATG----CCGACAGCCACACGCATGATCATATGCTGTGGTCTCTCCA 48587
Query 78538 CCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 78597
| |||| | | | || | | ||| ||| |||||||| || || || || || |
Sbjct 48588 CGATCTTGTCGTCAAGCTTAAGTAGGTAAGATCGCTCCAAAGTCTTGAAGCCGAAGTATT 48647
Query 78598 TGTA--TGAAAAGTCTCTCTCGTA 78619
||| ||||| ||||| || ||
Sbjct 48648 GGTAGTTGAAA--TCTCTGTCATA 48669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694664414903200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |