Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq122 279 7e-70 >seq122 Length=136518 Score = 279 bits (308), Expect = 7e-70 Identities = 1200/1876 (64%), Gaps = 42/1876 (2%) Strand=Plus/Plus Query 75365 TTCTT-ATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACAT 75423 ||||| ||| | |||||||| || || | | || | || |||||| || |||||||| Sbjct 46810 TTCTTGATCGACAGTGAACTGGATAGGTGCAGCAGCAGCTTGTGTACGGAGGTAGTACAT 46869 Query 75424 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483 ||||| || || || || |||| ||| |||||||||||| || | ||| | | Sbjct 46870 GCCAGTCTTCAGGCCAAGCTTCCAGCCGGTGAAATGCATGCTGGTGATCTTGCCCATAGT 46929 Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543 || || || || ||||| | || || || || ||||| || || | ||||| Sbjct 46930 GGGTTCCCTCATGTGGATATTTAGTGATTGGGACTGGTCAATGAACGCACCACGGTCAGC 46989 Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603 ||||| | | || ||| ||| | |||||||| | || ||| ||| ||||| Sbjct 46990 GGCCATCTGGACAACGGTTCGTTGGGATATTTCCCAGACGGTCTTGTAAAGAGCCTTGAT 47049 Query 75604 ATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660 |||| | |||| || | | || ||||| || ||||| || | || || ||||| Sbjct 47050 ATCAGCAGGAATGTTGGGGATGTTCTGAATTGAACCGCCCTCGGCAATGATACGGTTCTT 47109 Query 75661 GATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAAT 75720 || |||| ||| | | || | | | || | || ||||| | Sbjct 47110 CATGCTATCAGACCAGAGACCCATGTCAACAAGGTCCTTGAGCAACCAGGGGTTAACGAC 47169 Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780 || || || |||| | || | |||| ||| || || || || || || | | Sbjct 47170 CTGGAACTCGCCAGCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCA 47229 Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840 |||||||| ||||| || || | || || || ||||| || || ||||| || || Sbjct 47230 CTCATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGACCAACAAGCT 47289 Query 75841 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 75900 || | | ||||| | |||||| || || || |||| ||||||||||| || Sbjct 47290 GTTGCGCACACCATTTTGCTTGATTTGCTCCTTGAGGCTGGTCCAGTCCCAAAGATCCGA 47349 Query 75901 TGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAG-CATATGATCCATTAT 75959 ||| |||| ||| | |||||||| || || || | || || | || || | | Sbjct 47350 TGGGGTGACATTCCACATGTCGTATTGAAGGATGCCCT-GCGAGACGGGAGAACCCTCGT 47408 Query 75960 ATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAAT 76019 | || ||||| || || | || | || ||| || || | | | Sbjct 47409 AGGTAGAGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGACGCAGTCAAGGCGGCATGGT 47468 Query 76020 AAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAAT 76079 | || || ||||| |||| ||| || | | | || || | |||||||| | Sbjct 47469 AGATCGTCTCGAAGATCTGCTTGTTTAATTGTCTAGCCTCTGGTGACTCAAAAGGCATAC 47528 Query 76080 GTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCT 76139 | || | |||| ||| || || |||||||| |||| |||||| || | |||| | Sbjct 47529 GCAATGCCAAGAATGTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCA 47588 Query 76140 TATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGAT 76199 | ||| | || ||||| | ||||||||||| | ||| |||||| | || | || Sbjct 47589 TGTTGCTGTTACGGGCCTCTGGGACGGGGTAATAATTGACATCAATAATTCTGTTCAAAT 47648 Query 76200 TTCTGACAACTACTT---TAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC-- 76254 | || || |||| ||||| | | | | || | || ||| | | || || Sbjct 47649 TGTGAACGACGACTTGGGTAACCTCATGC---AACTTCTGGAAGTCATAAGTGCCTTCGT 47705 Query 76255 TATCACAAACATATTAAGA----GCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310 ||| |||| | | | || | || |||| || || || || ||||||| || Sbjct 47706 TATAGTCAACAAAGGACGGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAG 47765 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 || || | || ||||| ||||| ||||| | ||||| |||||||| | Sbjct 47766 GGGCGGAGTACTCAATGATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCT 47825 Query 76371 GTTGGTTGCTCTTTTTGTTACA-TGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCA 76429 ||||| ||||| ||| || ||| ||||| ||||| | || ||| ||||||| ||| Sbjct 47826 TCTGGTTACTCTTGCGGTTGCAGTGA-TCCTTGTAAAGCATGAAGGGATTTCCAGTCTCA 47884 Query 76430 ATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCG 76488 |||| | |||| ||| | | ||| | | ||| ||| || || | | || Sbjct 47885 GTCTGAGCCTCGAGAATGGCGTACCACA-GCTTCTGAGCCTTAATCTTCTGGCGGCCGCG 47943 Query 76489 CTTCTCTCTTTCATA-TTGT-GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546 |||| ||| || || | ||| | || || || ||||| || |||| ||| | Sbjct 47944 ACCCTCTGCTTCGTACTTCTCGTACAGGGCC--TCGAACTCATCGCCATAAACGTCAGCT 48001 Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606 | |||||| || || || |||||||| | | |||||| |||| | || ||| |||||| Sbjct 48002 AGACCAGGGCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTC 48061 Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666 || ||||||||||| ||||| ||||| | || ||||| |||| | | ||| || || Sbjct 48062 ATGAAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTG 48121 Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726 || |||||| |||||| |||||||| | || ||| || ||||| || || || || Sbjct 48122 CCATGGTTCTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAG 48181 Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786 || || | | |||| |||| || || || |||||||||| ||||| ||||||||||| Sbjct 48182 ATGGCGAAAGCACCAGGTCTCTTGTTGCCACCCTGATCTACGTATCTTGCAGTGTTATTG 48241 Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846 | || | | ||| || | ||||||||| || || || || || |||| ||| || Sbjct 48242 AAGACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAG 48301 Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906 ||| ||||| || || || || || || || ||||| || ||||| | Sbjct 48302 CCAGTAGCACGGATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATG 48361 Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGA 76966 ||||| || | ||||| ||||| ||||| || ||||| ||| |||||| | || Sbjct 48362 GCACAAGTCTTGAGGGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACGAGG 48421 Query 76967 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026 || || || | || || || || ||||| || | || || || |||||| Sbjct 48422 AAGCAAGACGAGAGCTGGGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGGGGAAGCATGA 48481 Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCT--ATATC----C 77080 ||||| |||| ||| | || ||||| || | ||| || ||||| | ||| | Sbjct 48482 GTGAAGTATTTGCTAGACATGAGGTTGTAGGTCTGAATGAC--CTTCTCAACATCGTCGC 48539 Query 77081 CATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTA 77140 | |||| || ||||| |||||||| | ||||||||| |||| || || |||| Sbjct 48540 CCCAGATG----CCGACAGCCACACGCATGATCATATGCTGTGGTCTCTCCACGATCTTG 48595 Query 77141 TTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 77198 | | | || | | ||| ||| |||||||| || || || || || | ||| || Sbjct 48596 TCGTCAAGCTTAAGTAGGTAAGATCGCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTG 48655 Query 77199 AAAAGTCTCTTTCGTA 77214 ||| ||||| || || Sbjct 48656 AAA--TCTCTGTCATA 48669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712929899601600