Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq122 279 7e-70
>seq122
Length=136518
Score = 279 bits (308), Expect = 7e-70
Identities = 1200/1876 (64%), Gaps = 42/1876 (2%)
Strand=Plus/Plus
Query 75365 TTCTT-ATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACAT 75423
||||| ||| | |||||||| || || | | || | || |||||| || ||||||||
Sbjct 46810 TTCTTGATCGACAGTGAACTGGATAGGTGCAGCAGCAGCTTGTGTACGGAGGTAGTACAT 46869
Query 75424 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483
||||| || || || || |||| ||| |||||||||||| || | ||| | |
Sbjct 46870 GCCAGTCTTCAGGCCAAGCTTCCAGCCGGTGAAATGCATGCTGGTGATCTTGCCCATAGT 46929
Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543
|| || || || ||||| | || || || || ||||| || || | |||||
Sbjct 46930 GGGTTCCCTCATGTGGATATTTAGTGATTGGGACTGGTCAATGAACGCACCACGGTCAGC 46989
Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603
||||| | | || ||| ||| | |||||||| | || ||| ||| |||||
Sbjct 46990 GGCCATCTGGACAACGGTTCGTTGGGATATTTCCCAGACGGTCTTGTAAAGAGCCTTGAT 47049
Query 75604 ATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660
|||| | |||| || | | || ||||| || ||||| || | || || |||||
Sbjct 47050 ATCAGCAGGAATGTTGGGGATGTTCTGAATTGAACCGCCCTCGGCAATGATACGGTTCTT 47109
Query 75661 GATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAAT 75720
|| |||| ||| | | || | | | || | || ||||| |
Sbjct 47110 CATGCTATCAGACCAGAGACCCATGTCAACAAGGTCCTTGAGCAACCAGGGGTTAACGAC 47169
Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780
|| || || |||| | || | |||| ||| || || || || || || | |
Sbjct 47170 CTGGAACTCGCCAGCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCA 47229
Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840
|||||||| ||||| || || | || || || ||||| || || ||||| || ||
Sbjct 47230 CTCATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGACCAACAAGCT 47289
Query 75841 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 75900
|| | | ||||| | |||||| || || || |||| ||||||||||| ||
Sbjct 47290 GTTGCGCACACCATTTTGCTTGATTTGCTCCTTGAGGCTGGTCCAGTCCCAAAGATCCGA 47349
Query 75901 TGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAG-CATATGATCCATTAT 75959
||| |||| ||| | |||||||| || || || | || || | || || | |
Sbjct 47350 TGGGGTGACATTCCACATGTCGTATTGAAGGATGCCCT-GCGAGACGGGAGAACCCTCGT 47408
Query 75960 ATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAAT 76019
| || ||||| || || | || | || ||| || || | | |
Sbjct 47409 AGGTAGAGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGACGCAGTCAAGGCGGCATGGT 47468
Query 76020 AAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAAT 76079
| || || ||||| |||| ||| || | | | || || | |||||||| |
Sbjct 47469 AGATCGTCTCGAAGATCTGCTTGTTTAATTGTCTAGCCTCTGGTGACTCAAAAGGCATAC 47528
Query 76080 GTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCT 76139
| || | |||| ||| || || |||||||| |||| |||||| || | |||| |
Sbjct 47529 GCAATGCCAAGAATGTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCA 47588
Query 76140 TATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGAT 76199
| ||| | || ||||| | ||||||||||| | ||| |||||| | || | ||
Sbjct 47589 TGTTGCTGTTACGGGCCTCTGGGACGGGGTAATAATTGACATCAATAATTCTGTTCAAAT 47648
Query 76200 TTCTGACAACTACTT---TAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC-- 76254
| || || |||| ||||| | | | | || | || ||| | | || ||
Sbjct 47649 TGTGAACGACGACTTGGGTAACCTCATGC---AACTTCTGGAAGTCATAAGTGCCTTCGT 47705
Query 76255 TATCACAAACATATTAAGA----GCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310
||| |||| | | | || | || |||| || || || || ||||||| ||
Sbjct 47706 TATAGTCAACAAAGGACGGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAG 47765
Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370
|| || | || ||||| ||||| ||||| | ||||| |||||||| |
Sbjct 47766 GGGCGGAGTACTCAATGATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCT 47825
Query 76371 GTTGGTTGCTCTTTTTGTTACA-TGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCA 76429
||||| ||||| ||| || ||| ||||| ||||| | || ||| ||||||| |||
Sbjct 47826 TCTGGTTACTCTTGCGGTTGCAGTGA-TCCTTGTAAAGCATGAAGGGATTTCCAGTCTCA 47884
Query 76430 ATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCG 76488
|||| | |||| ||| | | ||| | | ||| ||| || || | | ||
Sbjct 47885 GTCTGAGCCTCGAGAATGGCGTACCACA-GCTTCTGAGCCTTAATCTTCTGGCGGCCGCG 47943
Query 76489 CTTCTCTCTTTCATA-TTGT-GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546
|||| ||| || || | ||| | || || || ||||| || |||| ||| |
Sbjct 47944 ACCCTCTGCTTCGTACTTCTCGTACAGGGCC--TCGAACTCATCGCCATAAACGTCAGCT 48001
Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606
| |||||| || || || |||||||| | | |||||| |||| | || ||| ||||||
Sbjct 48002 AGACCAGGGCACTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTC 48061
Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666
|| ||||||||||| ||||| ||||| | || ||||| |||| | | ||| || ||
Sbjct 48062 ATGAAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTG 48121
Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726
|| |||||| |||||| |||||||| | || ||| || ||||| || || || ||
Sbjct 48122 CCATGGTTCTTTCGAAGATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAG 48181
Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786
|| || | | |||| |||| || || || |||||||||| ||||| |||||||||||
Sbjct 48182 ATGGCGAAAGCACCAGGTCTCTTGTTGCCACCCTGATCTACGTATCTTGCAGTGTTATTG 48241
Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846
| || | | ||| || | ||||||||| || || || || || |||| ||| ||
Sbjct 48242 AAGACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAG 48301
Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906
||| ||||| || || || || || || || ||||| || ||||| |
Sbjct 48302 CCAGTAGCACGGATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATG 48361
Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGA 76966
||||| || | ||||| ||||| ||||| || ||||| ||| |||||| | ||
Sbjct 48362 GCACAAGTCTTGAGGGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACGAGG 48421
Query 76967 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026
|| || || | || || || || ||||| || | || || || ||||||
Sbjct 48422 AAGCAAGACGAGAGCTGGGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGGGGAAGCATGA 48481
Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCT--ATATC----C 77080
||||| |||| ||| | || ||||| || | ||| || ||||| | ||| |
Sbjct 48482 GTGAAGTATTTGCTAGACATGAGGTTGTAGGTCTGAATGAC--CTTCTCAACATCGTCGC 48539
Query 77081 CATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTA 77140
| |||| || ||||| |||||||| | ||||||||| |||| || || ||||
Sbjct 48540 CCCAGATG----CCGACAGCCACACGCATGATCATATGCTGTGGTCTCTCCACGATCTTG 48595
Query 77141 TTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 77198
| | | || | | ||| ||| |||||||| || || || || || | ||| ||
Sbjct 48596 TCGTCAAGCTTAAGTAGGTAAGATCGCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTG 48655
Query 77199 AAAAGTCTCTTTCGTA 77214
||| ||||| || ||
Sbjct 48656 AAA--TCTCTGTCATA 48669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712929899601600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |