Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq87 150 1e-31
seq244 129 4e-25
seq5 120 2e-22
>seq87
Length=177310
Score = 150 bits (166), Expect = 1e-31
Identities = 163/214 (76%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || ||||| ||||||||||| ||||||||||| |||| ||| || |||| ||
Sbjct 65633 ACGAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCG 65574
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| ||||||| |||||||| || | || | ||| ||||| |||
Sbjct 65573 AGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGG 65514
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | ||||||||| || |||||||| | || || ||||
Sbjct 65513 ATCTTGGACTTGACATTGT--CGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCT 65456
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
| |||||||||||||| |||||||| ||||||||
Sbjct 65455 TGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 65422
>seq244
Length=60485
Score = 129 bits (142), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||||||||||| || |||||||| |||| || ||| |||| ||
Sbjct 25877 ACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCG 25818
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || || || ||||| ||||| || || | ||| | ||| ||||| |||
Sbjct 25817 AGTTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGG 25758
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||| | | | ||||| || | |||||| ||||| | || || |||||
Sbjct 25757 ATCTTCGACTTGACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTG 25698
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| |||||||| |||||
Sbjct 25697 CCAGTGAGAGTCTTGACGAAGATCTGCAT 25669
Score = 123 bits (136), Expect = 2e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187
|||| ||| |||||| ||||| ||||| ||||||||| | || || || | || ||
Sbjct 26624 ACCAAGTGGAGCGTGGATTCCTTCTGGATATTGTAATCGCTCAAGGTG-CGACCATCTTC 26566
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || || ||||| | ||| |||||||| | ||| | |||||||| |||
Sbjct 26565 CAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTG 26506
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | |||||||||| ||||| || || | ||||| |||||
Sbjct 26505 AATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAGGGTAATAGTCTT 26446
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| | ||||| || || || |||||
Sbjct 26445 TCCCGTCAATGTCTTGACAAAAATCTGCAT 26416
Score = 105 bits (116), Expect = 5e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||||| | || ||||| || || |||||| || |||||||| ||
Sbjct 26418 CATACCACCACGAAGTCTGAGAACAAGGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTC 26359
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || || | || |||| |||||| || |||||||| | || || || || |
Sbjct 26358 GCTCAGCGTTCGGCCATCCTCCAACTGCTTACCCGCAAAGATAAGTCGTTGTTGGTCGGG 26299
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| ||| ||||| | || | ||| | || ||||| | || |
Sbjct 26298 CGGGATTCCCTCCTTGTCCTGGATCTTG-GATTTGACGTTGTCGATTGTGTCCGAAGACT 26240
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| | || |||||||| || ||||||||||||||||||||||||||
Sbjct 26239 CCACCTCAAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 26188
>seq5
Length=467666
Score = 120 bits (132), Expect = 2e-22
Identities = 153/205 (75%), Gaps = 8/205 (4%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186
|| ||||| || ||| ||| || ||||||||||| |||| ||||| | || |||| |
Sbjct 48674 ACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTTCG-GC-CGTCCT 48617
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| || ||||| ||||| ||||||| |||||| || || | || | || ||||| |||
Sbjct 48616 CAAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCCTCCTTGTCCT 48557
Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
||||| ||| || ||| | |||||||||| || |||||||| | || || ||
Sbjct 48556 GGATCTTGGACTTGACATTGT--CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGT 48499
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAG 44329
||| ||||| |||||||||||||||
Sbjct 48498 CTTACCCGTAAGGGTCTTCACGAAG 48474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359988184371585
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |