Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq87 150 1e-31 seq244 129 4e-25 seq5 120 2e-22 >seq87 Length=177310 Score = 150 bits (166), Expect = 1e-31 Identities = 163/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| ||||||||||| ||||||||||| |||| ||| || |||| || Sbjct 65633 ACGAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCG 65574 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||||| |||||||| || | || | ||| ||||| ||| Sbjct 65573 AGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGG 65514 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | ||||||||| || |||||||| | || || |||| Sbjct 65513 ATCTTGGACTTGACATTGT--CGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCT 65456 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 | |||||||||||||| |||||||| |||||||| Sbjct 65455 TGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 65422 >seq244 Length=60485 Score = 129 bits (142), Expect = 4e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||||||||||| || |||||||| |||| || ||| |||| || Sbjct 25877 ACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCG 25818 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || || || ||||| ||||| || || | ||| | ||| ||||| ||| Sbjct 25817 AGTTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGG 25758 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | ||||| || | |||||| ||||| | || || ||||| Sbjct 25757 ATCTTCGACTTGACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTG 25698 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||| ||||| Sbjct 25697 CCAGTGAGAGTCTTGACGAAGATCTGCAT 25669 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 |||| ||| |||||| ||||| ||||| ||||||||| | || || || | || || Sbjct 26624 ACCAAGTGGAGCGTGGATTCCTTCTGGATATTGTAATCGCTCAAGGTG-CGACCATCTTC 26566 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || || ||||| | ||| |||||||| | ||| | |||||||| ||| Sbjct 26565 CAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTG 26506 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | |||||||||| ||||| || || | ||||| ||||| Sbjct 26505 AATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAGGGTAATAGTCTT 26446 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| | ||||| || || || ||||| Sbjct 26445 TCCCGTCAATGTCTTGACAAAAATCTGCAT 26416 Score = 105 bits (116), Expect = 5e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||||| | || ||||| || || |||||| || |||||||| || Sbjct 26418 CATACCACCACGAAGTCTGAGAACAAGGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTC 26359 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || |||| |||||| || |||||||| | || || || || | Sbjct 26358 GCTCAGCGTTCGGCCATCCTCCAACTGCTTACCCGCAAAGATAAGTCGTTGTTGGTCGGG 26299 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| ||||| | || | ||| | || ||||| | || | Sbjct 26298 CGGGATTCCCTCCTTGTCCTGGATCTTG-GATTTGACGTTGTCGATTGTGTCCGAAGACT 26240 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| | || |||||||| || |||||||||||||||||||||||||| Sbjct 26239 CCACCTCAAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 26188 >seq5 Length=467666 Score = 120 bits (132), Expect = 2e-22 Identities = 153/205 (75%), Gaps = 8/205 (4%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186 || ||||| || ||| ||| || ||||||||||| |||| ||||| | || |||| | Sbjct 48674 ACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTTCG-GC-CGTCCT 48617 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | || ||||| ||||| ||||||| |||||| || || | || | || ||||| ||| Sbjct 48616 CAAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCCTCCTTGTCCT 48557 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||| || ||| | |||||||||| || |||||||| | || || || Sbjct 48556 GGATCTTGGACTTGACATTGT--CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGT 48499 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAG 44329 ||| ||||| ||||||||||||||| Sbjct 48498 CTTACCCGTAAGGGTCTTCACGAAG 48474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988184371585