Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq244 167 6e-36
seq5 140 8e-28
seq87 134 3e-26
>seq244
Length=60485
Score = 167 bits (184), Expect = 6e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || ||||| || || |||||||| || |||||||| || |||
Sbjct 26191 CAAATCTTCGTGAAGACCCTCACCGGCAAGACGATCACTCTTGAGGTGGAGTCTTCGGAC 26250
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||||||| ||||| |||||||| || |||||||| || ||||| |||
Sbjct 26251 ACAATCGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCAACAA 26310
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||||||| || || || ||| | || ||||| | || || ||| || ||| |
Sbjct 26311 CGACTTATCTTTGCGGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTACAACATT 26370
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || || ||||| ||||| |||||| | |||||
Sbjct 26371 CAGAAGGAGTCAACTCTGCACCTTGTTCTCAGACT 26405
Score = 141 bits (156), Expect = 2e-28
Identities = 159/209 (76%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || || | || ||||| || || ||||| || || ||| || |||
Sbjct 26419 CAGATTTTTGTCAAGACATTGACGGGAAAGACTATTACCCTAGAAGTTGAATCTTCCGAC 26478
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || |||||||||||||| ||||| || |||||||| ||||||
Sbjct 26479 ACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAGCAA 26538
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| || |||||||| || || ||||| |||||||| | || |||| |||||| || |
Sbjct 26539 CGTCTCATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGCAC-CTTGAGCGATTACAATAT 26597
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTT 178131
||| || ||||| || || || |||| ||
Sbjct 26598 CCAGAAGGAATCCACGCTCCA-CTTGGTT 26625
Score = 120 bits (132), Expect = 7e-22
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || || || ||||| || |||||||| ||||| || || ||||||||||
Sbjct 25970 TCGTCAAGACCCTTACCGGAAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCG 26029
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| || || || ||||| || ||||| || || || ||||| |||||||| ||| | |
Sbjct 26030 ACAATGTTAAGTCGAAGATCCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGCGATTGA 26089
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
| |||||||| || ||||| || ||||| | || || |||| || ||| | || || |
Sbjct 26090 TTTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTGTCCGACTACAACATTCAGAAGG 26149
Query 178111 AATCAACACTGCATCTTGT 178129
|||| || || || || ||
Sbjct 26150 AATCGACTCTTCACCTCGT 26168
>seq5
Length=467666
Score = 140 bits (154), Expect = 8e-28
Identities = 151/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
|||||||| || || || || || || ||||||||||||||||| || |||||||||
Sbjct 48475 TTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACCATC 48534
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| |||||||| || || || || || ||||| || || ||
Sbjct 48535 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAACAGCGTCTG 48594
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||||||||| || || || || || || | |||||| |||| || ||| |||| |||
Sbjct 48595 ATCTTCGCCGGCAAGCAACTTGAGGACGGCCGAACTCTTTCCGACTACAACATCCAGAAA 48654
Query 178110 GAATCAACACTGCATCTTGT 178129
|| || || || || || ||
Sbjct 48655 GAGTCCACCCTCCACCTCGT 48674
>seq87
Length=177310
Score = 134 bits (148), Expect = 3e-26
Identities = 156/209 (75%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| || ||||| || || ||||| || || || |||||||| |||||||| |||
Sbjct 65428 CAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTAGC--- 65484
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||||||||| || ||||| ||||| |||||||| || || || || || ||||||
Sbjct 65485 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 65544
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| ||||| ||||||||||| || || |||||||| || | ||||| |||| || |||
Sbjct 65545 CAGCGACTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACTCTCTCCGACTACAAC 65604
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || ||||| ||
Sbjct 65605 ATCCAGAAGGAGAGCACCCTTCATCTCGT 65633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203723411482970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |