Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq334 147 5e-30
>seq334
Length=652976
Score = 147 bits (162), Expect = 5e-30
Identities = 281/406 (69%), Gaps = 10/406 (2%)
Strand=Plus/Plus
Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296
||||||| ||||| ||| ||| | ||||| ||||| | ||||||||| |||
Sbjct 128828 CCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCTAACGAGCTCA 128887
Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355
|| || |||||||||||||| || | | |||| | || ||| || | |||
Sbjct 128888 TCTCGCGTGACGAGGGTCTCCA-CACCGACTTCGCCTGCCTACTGTTCTCGCACCTC--- 128943
Query 230356 AACAAGCTACCATTCGAG-ACG--GTCAAACAAATCATTACAGAAGCAGTTGAAAACGAA 230412
||||| | || | || | | ||| | | ||||| ||||| || || | | |||
Sbjct 128944 AACAACCGCCCCGGCAAGGATGTCGTCCAGAAGATCATCACAGATGCCGTCGCCATCGAG 129003
Query 230413 AAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATT-GGCATGAACGCTGAACTTAT 230471
|||| ||| | || || | || || |||| || | ||||||||||| | || ||
Sbjct 129004 CAGGAATTCTTGACGGAGGCACTGCCCTG-CGCCCTACTCGGCATGAACGCCAACCTCAT 129062
Query 230472 GGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGT 230531
| ||||||||||| ||||| |||||||| | || || || || ||| ||||||| ||
Sbjct 129063 GAAGCAGTACATCGAGTTCGTCGCCGACCGTCTATTGGTCGCCCTCGGTAACGAGAAGGT 129122
Query 230532 GTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAA 230591
|||| | | | |||||||| | || |||||| ||| || || || ||||||||
Sbjct 129123 GTACCGCGCCACAAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAA 129182
Query 230592 CTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||||||| ||||| ||| | ||||| |||| | | ||||| |||
Sbjct 129183 CTTCTTCGAGAAGCGCGTCGGCGACTACCAGAAGGCCGGTGTCATG 129228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057813902739350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |