Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq334 147 5e-30 >seq334 Length=652976 Score = 147 bits (162), Expect = 5e-30 Identities = 281/406 (69%), Gaps = 10/406 (2%) Strand=Plus/Plus Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 ||||||| ||||| ||| ||| | ||||| ||||| | ||||||||| ||| Sbjct 128828 CCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCTAACGAGCTCA 128887 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355 || || |||||||||||||| || | | |||| | || ||| || | ||| Sbjct 128888 TCTCGCGTGACGAGGGTCTCCA-CACCGACTTCGCCTGCCTACTGTTCTCGCACCTC--- 128943 Query 230356 AACAAGCTACCATTCGAG-ACG--GTCAAACAAATCATTACAGAAGCAGTTGAAAACGAA 230412 ||||| | || | || | | ||| | | ||||| ||||| || || | | ||| Sbjct 128944 AACAACCGCCCCGGCAAGGATGTCGTCCAGAAGATCATCACAGATGCCGTCGCCATCGAG 129003 Query 230413 AAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATT-GGCATGAACGCTGAACTTAT 230471 |||| ||| | || || | || || |||| || | ||||||||||| | || || Sbjct 129004 CAGGAATTCTTGACGGAGGCACTGCCCTG-CGCCCTACTCGGCATGAACGCCAACCTCAT 129062 Query 230472 GGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGT 230531 | ||||||||||| ||||| |||||||| | || || || || ||| ||||||| || Sbjct 129063 GAAGCAGTACATCGAGTTCGTCGCCGACCGTCTATTGGTCGCCCTCGGTAACGAGAAGGT 129122 Query 230532 GTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAA 230591 |||| | | | |||||||| | || |||||| ||| || || || |||||||| Sbjct 129123 GTACCGCGCCACAAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAA 129182 Query 230592 CTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||| ||||| ||| | ||||| |||| | | ||||| ||| Sbjct 129183 CTTCTTCGAGAAGCGCGTCGGCGACTACCAGAAGGCCGGTGTCATG 129228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057813902739350