Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq334 154 2e-32
>seq334
Length=652976
Score = 154 bits (170), Expect = 2e-32
Identities = 476/723 (66%), Gaps = 14/723 (2%)
Strand=Plus/Minus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| |||| ||||| || ||||| ||||| || ||||| | || || || ||||||
Sbjct 129212 TGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCC 129153
Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT 16795
||||| || || || || || || | | || || || || || | | ||
Sbjct 129152 ATGAAGTCGAAGGGGTTTGTGGCGCGGTACACCTTCTCGTTACCGAGGGCGACCAATAGA 129093
Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA-TAAGACG 16854
| || || || || || || || || ||| | | | |||||| || | || | ||
Sbjct 129092 CGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGTAGGGCG 129033
Query 16855 TACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA-- 16912
| || || || |||||||| ||| ||||| || | || || || | || ||
Sbjct 129032 CAG-GGCAGTGCCTCCGTCAAGAATTCCTGCTCGATGGCGACGGCATCTGTGATGATCTT 128974
Query 16913 CTAG-CAAC-TCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGA 16970
|| | | || || || | || |||| |||| | | || |||| || || ||||
Sbjct 128973 CTGGACGACATCCTTGCCGGGGCGGT---TGTTGAGG-TGCGAGAACAGTAGGCAGGCGA 128918
Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030
| ||| || | |||||||| | ||| || |||||||| || |||| |||||||
Sbjct 128917 AGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGGGCA 128858
Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090
| || || ||||| | ||| || || | |||||| | || ||||| || ||||
Sbjct 128857 TGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGCCCT 128798
Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATT 17150
|||||| ||||| ||||| || || | |||| | || | | |||| | ||||| |
Sbjct 128797 CGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTGGACTTCTTGTCAGCGATCCAGT 128738
Query 17151 TCTGCACCCACTCGGCTTTT-TGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA-A 17208
| | |||| || || || ||| |||||| || || || ||||| || || | |
Sbjct 128737 GCAGGGCCCAGTCCGCCTTCCTGCGG-ATGCAAGGGATGGTGTCGATGGCGTTGAAGAGA 128679
Query 17209 TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268
| |||| | | | || | || || || || ||||| || ||| | |||||
Sbjct 128678 TGGGTCTTCTGGGCGG-GCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTCGGA 128620
Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328
||| ||||||||||| ||||| || ||||| |||||||| || || | || || ||
Sbjct 128619 GTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAATCTGGAC 128560
Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388
|| | ||||||| || | || || ||||| || ||||||||| |||||||||||
Sbjct 128559 CTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAAAA 128500
Query 17389 CGC 17391
||
Sbjct 128499 GGC 128497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517540780356600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |