Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq334 154 2e-32 >seq334 Length=652976 Score = 154 bits (170), Expect = 2e-32 Identities = 476/723 (66%), Gaps = 14/723 (2%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| |||| ||||| || ||||| ||||| || ||||| | || || || |||||| Sbjct 129212 TGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCC 129153 Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT 16795 ||||| || || || || || || | | || || || || || | | || Sbjct 129152 ATGAAGTCGAAGGGGTTTGTGGCGCGGTACACCTTCTCGTTACCGAGGGCGACCAATAGA 129093 Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA-TAAGACG 16854 | || || || || || || || || ||| | | | |||||| || | || | || Sbjct 129092 CGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGTAGGGCG 129033 Query 16855 TACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA-- 16912 | || || || |||||||| ||| ||||| || | || || || | || || Sbjct 129032 CAG-GGCAGTGCCTCCGTCAAGAATTCCTGCTCGATGGCGACGGCATCTGTGATGATCTT 128974 Query 16913 CTAG-CAAC-TCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGA 16970 || | | || || || | || |||| |||| | | || |||| || || |||| Sbjct 128973 CTGGACGACATCCTTGCCGGGGCGGT---TGTTGAGG-TGCGAGAACAGTAGGCAGGCGA 128918 Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030 | ||| || | |||||||| | ||| || |||||||| || |||| ||||||| Sbjct 128917 AGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGGGCA 128858 Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090 | || || ||||| | ||| || || | |||||| | || ||||| || |||| Sbjct 128857 TGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGCCCT 128798 Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATT 17150 |||||| ||||| ||||| || || | |||| | || | | |||| | ||||| | Sbjct 128797 CGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTGGACTTCTTGTCAGCGATCCAGT 128738 Query 17151 TCTGCACCCACTCGGCTTTT-TGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA-A 17208 | | |||| || || || ||| |||||| || || || ||||| || || | | Sbjct 128737 GCAGGGCCCAGTCCGCCTTCCTGCGG-ATGCAAGGGATGGTGTCGATGGCGTTGAAGAGA 128679 Query 17209 TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268 | |||| | | | || | || || || || ||||| || ||| | ||||| Sbjct 128678 TGGGTCTTCTGGGCGG-GCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTCGGA 128620 Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328 ||| ||||||||||| ||||| || ||||| |||||||| || || | || || || Sbjct 128619 GTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAATCTGGAC 128560 Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388 || | ||||||| || | || || ||||| || ||||||||| ||||||||||| Sbjct 128559 CTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAAAA 128500 Query 17389 CGC 17391 || Sbjct 128499 GGC 128497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517540780356600