Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq434 199 5e-46
>seq434
Length=564148
Score = 199 bits (220), Expect = 5e-46
Identities = 591/903 (65%), Gaps = 20/903 (2%)
Strand=Plus/Minus
Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010
||||||||||| || | |||| | | | ||||| ||||| | || ||||| | | |
Sbjct 552335 TCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGCACATGAGGGTC 552276
Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070
||||| || | | || || || ||||| ||||| || |||||||||||||| | ||
Sbjct 552275 CACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCAGGAAA 552216
Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130
||||| | || | ||| || || || |||||| ||| || |||||| | | |
Sbjct 552215 AGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTCGAAA 552156
Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190
| ||| || ||||| || || | || |||| | | | ||||| | ||||| || |||
Sbjct 552155 ACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTGCCACCC 552096
Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250
|| |||| ||||||||| |||||||| | || | | ||| || | |||||| || ||
Sbjct 552095 TGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGAG 552036
Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 54310
| || || || |||| || || || | || ||||| || |||||
Sbjct 552035 GTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACCA 551976
Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTC 54369
|| || || ||||| || ||||| | ||||| || |||| || || ||||| |||||
Sbjct 551975 ATACCACCGGCCATCTTGGAGATCATGGCGCA-GGTCTTAAGGGTGTCGTAGATACCCTC 551917
Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AG 54425
|| || || ||| |||||| || || || ||| || | | ||| | || |
Sbjct 551916 AATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGA---GCTGA-GCCTGGGGTG 551861
Query 54426 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT 54485
|||| ||||| || | || || || || || || || |||| || | || || |
Sbjct 551860 TTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTATTTGCTGGACATGAGGTTAT 551801
Query 54486 ACGTCTCGATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATT 54541
| |||| ||| | || | ||| || |||| || || || ||||||||
Sbjct 551800 AGGTCTGTATAACCTTCTCCACATCATCACCCCAGATG----CCGACAGCCACACGCATG 551745
Query 54542 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCC 54601
| ||||||||| ||||| || |||||||| | || | || |||| || ||| |||
Sbjct 551744 ATCATGTGCTGCGGTCTCTCGACGATCTTATCGTCAAGCTTGAGCAGATATGATCGCTCC 551685
Query 54602 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTG 54661
||||| || || || || || | ||| ||||||| || || | ||| | ||||
Sbjct 551684 AAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCTGTCATAGACAATGGCAGAGTCA 551625
Query 54662 AGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATCGGAGAATG 54720
| | ||||| | | | | || ||| | | | | ||| || || || ||||| |
Sbjct 551624 AAGTCCTCCTTGTGTCTCATGAC-ACACTCGTAGGTCTCCTTAGAGATCATAGGAGATGG 551566
Query 54721 TTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGttt 54780
|| | || || || |||||||||| | | ||| | || || || | | ||
Sbjct 551565 CTTTCTGTTCTTTGGGTTGACATAGTGGTAGAGATCACTGATGACAGCAGACCACTGCTT 551506
Query 54781 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 54840
|| || | |||||||| ||||| ||||| || | || || || |||||||| || ||
Sbjct 551505 CTTGGTCTGCTTGTGTAGGTTTGACACGGCAATACGTGCAGCGAGGATGGCATAGTCTGG 551446
Query 54841 ATG 54843
||
Sbjct 551445 GTG 551443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593716070967600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |