Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq334 369 4e-97 seq27 138 1e-27 seq737 129 6e-25 seq698 127 2e-24 >seq334 Length=652976 Score = 369 bits (408), Expect = 4e-97 Identities = 533/743 (72%), Gaps = 17/743 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||| ||| || || |||||||||| |||||| | || || Sbjct 128368 ATCTGGCAGATGTACAAGAAGCACGAAGCTTCCTTCTGGACCGCTGAGGAGATTGATCTC 128427 Query 116696 TCCAAGGA-CACGAGCGACTGGG---AGCGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | ||| | ||||| | ||| |||||| Sbjct 128428 TCCAAGGATCTCCA-CGACTGGAGCAACCGCCTAAACGATGATGAGAAGTTCTTCATCTC 128486 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | || |||||||||||||| ||||||||| ||||||||||| || |||||||| Sbjct 128487 CCACATCCTTGCCTTTTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTTGTCGAGCG 128546 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || ||||| ||| | |||||||||| ||||||||||| || |||||| || Sbjct 128547 ATTCTCTGGCGAGGTCCAGATTCCCGAGGCGCGATGCTTCTACGGTTTCCAGATCATGAT 128606 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927 ||||||| | ||||| || | || || |||||| ||||| ||| | | || | Sbjct 128607 GGAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGACACATACATCAAGGAGCCCGC 128666 Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987 | ||||| || | | || ||||||||||| || || || ||| || ||||| Sbjct 128667 CC----AGAAGACCCATCTCTTCAACGCCATCGACACCATCCCTTGCATCCGCAGGAAGG 128722 Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047 | || ||||| |||| ||||||||| | || || || |||||| | |||| || | | Sbjct 128723 CGGACTGGGCCCTGCACTGGATCGCTGACAAGAAGTCCACCTTCGCCCAGCGTTTGATCG 128782 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 |||| || |||||||||||| ||||||| || |||||| |||| || ||||||| Sbjct 128783 CCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCA 128842 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| || || ||||||||||||||||| ||| |||||||||||||| | ||||||| Sbjct 128843 AGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCTAACGAGCTCATCTCGCGTGACGAGG 128902 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227 |||| || |||||| ||||| | |||||| ||| | | || || || || Sbjct 128903 GTCTCCACACCGACTTCGCCTGCCTACTGTTCTCGCACCTCAACAACCGCCCCGGCAAGG 128962 Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287 |||| | ||||| |||| || || ||||||||||||||| ||| | || || | Sbjct 128963 ATGTCGTCCAGAAGATCATCACAGATGCCGTCGCCATCGAGCAGGAATTCTTGACGGAGG 129022 Query 117288 CGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTT 117345 | ||||| |||| || || || | || || || | ||| ||| ||||||||||| Sbjct 129023 CACTGCC-CTGCGCCCTACTCGGCATGAA-CGCCAACCTCATGAAGCAGTACATCGAGTT 129080 Query 117346 CGTCGCCGACAGGCTGCTGCTCG 117368 |||||||||| | || || ||| Sbjct 129081 CGTCGCCGACCGTCTATTGGTCG 129103 >seq27 Length=240170 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || |||||| | || || || | | | Sbjct 62391 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 62332 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| |||||| | ||||| Sbjct 62331 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAA 62272 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||| |||| ||| ||||| || || || |||| ||||| ||| |||||||||| Sbjct 62271 CAGCGACTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTCTCCGACTACAAC 62212 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 |||||||||||| ||| || || || ||| | ||| Sbjct 62211 ATCCAGAAGGAGAGCACCCTTCACCTCGTGCTCCGC 62176 >seq737 Length=337091 Score = 129 bits (142), Expect = 6e-25 Identities = 157/213 (74%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 40687 AAAATGCAA-ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||||| ||| | ||||| || || || ||||| || || |||||| |||| || || | Sbjct 284758 AAAATTCAATAGCTTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTC 284699 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | | ||||| ||||||| ||||| |||||||||||| | || Sbjct 284698 TTCCGACACCATCGACAATGTCAAGTCCAAAATTCAGGACAAGGAGGGCATCCCCCCCGA 284639 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| || || || |||| ||| ||||| || || || |||| || || || |||||| Sbjct 284638 CCAACAGCGTCTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTTTCCGACTA 284579 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| |||| || || || || Sbjct 284578 CAACATCCAGAAGGAGTCCACTCTCCACCTCGT 284546 >seq698 Length=460427 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | ||||| || || || ||| |||| || ||| | || Sbjct 203806 ATGCAAATCTTTGTCAAGACATTGACGGGGAAGACAATTACCCTCGAAGTTGAATCTTCC 203865 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || |||| ||||| || ||||| || | || || Sbjct 203866 GACACCATCGACAACG-TGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCA 203924 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||||| ||| || || |||||||| |||| ||||| || | ||||||||| Sbjct 203925 ACAACGTCTCATCTTCGCTGGAAAGCAGCTGGAGGACGGTCGCACTCTGAGCGACTACAA 203984 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||||| || Sbjct 203985 CATCCAGAAGGAGTCTACGCTCCA 204008 Score = 122 bits (134), Expect = 9e-23 Identities = 160/218 (73%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 40683 CCGAAAA-ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCG 40741 |||| || ||||| || ||||| || || ||||| ||||| |||||||| | || |||| Sbjct 203053 CCGACAAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCG 203112 Query 40742 AAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCC 40800 || || | || | | | | |||| | ||| || || | ||||| |||||||||||| Sbjct 203113 AATCCTCGGATACCATCGACAACGTT-AAGTCGAAGATCCAGGACAAGGAGGGCATCCCC 203171 Query 40801 GCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 40860 | ||||| || ||| | || | ||| || || || || || |||| ||||| || | Sbjct 203172 CCTGACCAACAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGTCGCACTCTTTCC 203231 Query 40861 GACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||||||||||| ||| || || || || Sbjct 203232 GACTACAACATCCAGAAGGAGAGCACTCTCCACCTTGT 203269 Score = 118 bits (130), Expect = 1e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 40694 AAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACA 40753 ||| | | ||||| || || || || || ||||||||| | || ||||| | |||||| Sbjct 203354 AAACAGTTGTAAAGACCCTTACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTCCGACA 203413 Query 40754 GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAAC 40813 | | | | ||||| || |||| ||||| |||||||| || | |||||||| | Sbjct 203414 CCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGC 203473 Query 40814 GACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCC 40873 || | |||| ||| ||||| ||||| || || | || ||||| |||||||||||||| Sbjct 203474 GATTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATCC 203533 Query 40874 AGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||| |||| || || || || Sbjct 203534 AGAAGGAATCCACTCTTCACCTCGT 203558 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||||||||| || || ||||| ||||| || |||||| | || || || | | Sbjct 203578 ATGCAAATATTCGTGAAGACTCTCACTGGCAAGACAATCACCCTTGAGGTGGAGTCTTCG 203637 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||| || || | ||||| ||||| ||||| | ||||| Sbjct 203638 GACACGATCGACAACG-TCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCA 203696 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||| |||| || || || ||| |||| || | || || || | ||||||||| Sbjct 203697 ACAACGACTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTACAA 203756 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || ||||| || || Sbjct 203757 CATTCAGAAGGAGTCGACCCTGCACCTTGT 203786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515214402021200