Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq698 102 7e-17
seq737 100 2e-16
seq27 91.5 1e-13
>seq698
Length=460427
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | || | || | ||| | || ||||| || ||||||||||| ||||
Sbjct 203806 TACCACCGCGAAGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGC 203747
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
||| || || |||||| | ||| || || || |||| || || || || ||||| |
Sbjct 203746 TCAGCGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCG 203687
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || ||| || | |||| ||||||| ||| |
Sbjct 203686 GGATTCCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCA 203627
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || ||||| || ||||| || || || || |||||
Sbjct 203626 CCTCAAGGGTGATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || || || || |||||||| ||| | || || |||||| ||||| || ||
Sbjct 203546 GTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCG 203487
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| | |||||||| || ||||| |||||||||||||| ||| || ||
Sbjct 203486 GCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTG 203427
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| |||||| | ||||||||| | ||| | || || ||||| || ||
Sbjct 203426 ACATTGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTAAGGGTC 203367
Query 118722 TTTACAA 118728
|||||||
Sbjct 203366 TTTACAA 203360
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || || |||||||| ||| | |||||| || || || || ||||| ||| |
Sbjct 203252 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCTTCAAGTTGCTTTCCGGCGAA 203193
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
|| | ||||| || || || || |||||||||||||| || || ||||| |
Sbjct 203192 AATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTT 203133
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|||| ||| |||| | |||||||| | || | || |||||||| || || || ||
Sbjct 203132 GTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGAC 203073
Query 118727 AAAAATCTGCAT 118738
|| ||||||||
Sbjct 203072 GAAGATCTGCAT 203061
>seq737
Length=337091
Score = 100 bits (110), Expect = 2e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||| | ||| || |||||||| ||
Sbjct 284551 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCGAGTTG 284610
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| |||| |||||||| || ||||| || |||||||||||||| ||||||
Sbjct 284611 CTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATTTT 284670
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| |||||| | ||| ||||||| ||| | || || || ||
Sbjct 284671 GGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 284730
Query 118715 CAGAGTTTTTACAAA 118729
|| || || || ||
Sbjct 284731 AAGGGTCTTCACGAA 284745
>seq27
Length=240170
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || || |||||||| ||| | |||||| |||||||| || || || ||| |
Sbjct 62200 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 62259
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
||| || ||||| || ||||| || || ||||||||||| || || || || |
Sbjct 62260 GATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 62319
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|||| |||||| | ||| ||||| | ||| | || ||||| || || || || ||
Sbjct 62320 GTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGAC 62379
Query 118727 AAAAATCTGCATG 118739
|| |||||||||
Sbjct 62380 GAAGATCTGCATG 62392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433826460955540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |