Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq698 102 7e-17 seq737 100 2e-16 seq27 91.5 1e-13 >seq698 Length=460427 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | || | || | ||| | || ||||| || ||||||||||| |||| Sbjct 203806 TACCACCGCGAAGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGC 203747 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 ||| || || |||||| | ||| || || || |||| || || || || ||||| | Sbjct 203746 TCAGCGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCG 203687 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||||||||| || || ||| || | |||| ||||||| ||| | Sbjct 203686 GGATTCCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCA 203627 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || ||||| || ||||| || || || || ||||| Sbjct 203626 CCTCAAGGGTGATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || || |||||||| ||| | || || |||||| ||||| || || Sbjct 203546 GTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCG 203487 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | |||||||| || ||||| |||||||||||||| ||| || || Sbjct 203486 GCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTG 203427 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | ||||||||| | ||| | || || ||||| || || Sbjct 203426 ACATTGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTAAGGGTC 203367 Query 118722 TTTACAA 118728 ||||||| Sbjct 203366 TTTACAA 203360 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||| | |||||| || || || || ||||| ||| | Sbjct 203252 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCTTCAAGTTGCTTTCCGGCGAA 203193 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 || | ||||| || || || || |||||||||||||| || || ||||| | Sbjct 203192 AATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTT 203133 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||| |||| | |||||||| | || | || |||||||| || || || || Sbjct 203132 GTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGAC 203073 Query 118727 AAAAATCTGCAT 118738 || |||||||| Sbjct 203072 GAAGATCTGCAT 203061 >seq737 Length=337091 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||| || |||||||| || Sbjct 284551 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCGAGTTG 284610 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| |||||||| || ||||| || |||||||||||||| |||||| Sbjct 284611 CTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATTTT 284670 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | ||| ||||||| ||| | || || || || Sbjct 284671 GGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 284730 Query 118715 CAGAGTTTTTACAAA 118729 || || || || || Sbjct 284731 AAGGGTCTTCACGAA 284745 >seq27 Length=240170 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||| | |||||| |||||||| || || || ||| | Sbjct 62200 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 62259 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || ||||| || ||||| || || ||||||||||| || || || || | Sbjct 62260 GATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 62319 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| |||||| | ||| ||||| | ||| | || ||||| || || || || || Sbjct 62320 GTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGAC 62379 Query 118727 AAAAATCTGCATG 118739 || ||||||||| Sbjct 62380 GAAGATCTGCATG 62392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433826460955540