Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq434 275 6e-69 seq334 228 7e-55 seq698 111 1e-19 >seq434 Length=564148 Score = 275 bits (304), Expect = 6e-69 Identities = 1006/1554 (65%), Gaps = 64/1554 (4%) Strand=Plus/Minus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || || || || ||||| | | ||| ||||| || || || || ||| | | Sbjct 553150 GGTTGACAACCTGGAATTCGCCAGCAAGGACACGGCGGGAATAGATATTCGAGGTGTAAG 553091 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGC-- 22569 | ||||| |||||||||| ||||| ||||| | || || || ||||| || || Sbjct 553090 GCTCGAAGCATTCATTGTTACCCAGGATCTGGGAAGTACTGGCTGTAGGCATGGGGGCGA 553031 Query 22570 -CAACAGTAGCGAGTTTCTCAAGCCG---TGCTTTGAAATTTTACTCTTGAGCATCGACC 22625 ||||| ||| ||| | | || ||||| |||||| ||| || | | || Sbjct 553030 CCAACA--AGCT-GTTGCGTACACCAGTTTGCTT---AATTTTCTCCTTTAGGCTTGTCC 552977 Query 22626 AGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCG 22683 ||||||| ||||| ||||| || ||||| |||||| |||||||| | | || | ||| Sbjct 552976 AGTCCCAGAGATCCGACGGGGTGACATT---CCACATGTCGTATTGAAGGATACCCTGCG 552920 Query 22684 ACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCT 22743 | | || ||||| || || ||| || |||| | | ||||| || | Sbjct 552919 AGACA--GGAGAACCTTCATAGGTAGAGTAAGGTCCATCAACCTTGGCAATATCCGAAGA 552862 Query 22744 CGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC--- 22800 ||| ||| ||| | | || || ||||||||||| | |||||||| | ||| Sbjct 552861 CGCAGTCAAGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCTGCCTGGCCTC 552802 Query 22801 -GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGC 22859 || ||| ||| | ||||| |||| | || ||| | || || | ||||||||| | Sbjct 552801 TGGTGAC----TCGAAAGGCATGCGCAGCGCCAGGAATGTATCAGCAAGACCCTGAACAC 552746 Query 22860 CTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTT----GCCTCGGGCAAAGGATAC 22915 | | ||| || || |||| | || || || || ||||| || | || || Sbjct 552745 CAAGACCAATGGGACGGTGTCGCATGTTG----CTGTTACGGGCCTCTGGGACGGGGTAG 552690 Query 22916 CAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTC-ACAATTTTCGTTATNNNNNNNNN 22974 | || || || ||||||||| ||| || | || | || || | Sbjct 552689 TAGTTGACGTCAATGATTCTGTTCAGGTTG-TGAACGACGACTTGAGTAACCTCATGCAA 552631 Query 22975 NNNNTCAAAGTCGTAAACGCCCGA-TTGTA--CAACAAACTTGTTGACGGCGAT-CGAGG 23030 | ||||| || ||| || || |||| || ||||||| | | ||| Sbjct 552630 CTTCTGGAAGTCATAGGTTCCCTCGTTATAGTCAACGAA-----TGACGGCAACGCAAGG 552576 Query 23031 CAAGA----TTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 ||| ||||| || ||||||||||| || | |||||| | || || || || Sbjct 552575 GAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCAGTGCAG 552516 Query 23087 AGATT---GCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAA 23143 || || ||| | || || || | || |||||||||| || || ||||| | Sbjct 552515 AGGTTCGAGCTGCGA---ATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGA 552459 Query 23144 TCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCAC 23203 |||||||| |||||| | || | || ||||| ||| | |||| || || |||| Sbjct 552458 TCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATACCAC 552399 Query 23204 ATAGTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAA 23262 | ||||||| | || | || || | | || ||| | |||||||| | ||||| Sbjct 552398 AGCTTCTGAGCCTTAAT-CTTCTGGCGGCCACGACCCTCTGCTTCGTACTTCTCGTACAG 552340 Query 23263 CGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGA 23321 || ||||| ||| | || || ||| ||||| ||||| || ||| | || ||||||| Sbjct 552339 GGCCTCAAACTCGTCGCCATAGACA-TCGGCTAGGCCAGGGCATTCGTTGGGGCACATGA 552281 Query 23322 GACTCCACATTG--AGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGC 23379 | ||||| | | | || || || || || |||| || || || || ||||| ||||| Sbjct 552280 GGGTCCAC-TCGCCATTC-TTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGC 552223 Query 23380 GTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAA 23439 ||| || || ||||| || || || || |||||| ||||||| | |||| || Sbjct 552222 CAGGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAA 552163 Query 23440 GTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATT 23499 || || || |||| ||||| |||||||| || | |||||| || || |||||||| || Sbjct 552162 CTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTT 552103 Query 23500 GCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACC 23559 ||| ||||| || ||||| | || ||||| ||| | || | ||||| || || | ||| Sbjct 552102 GCCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACC 552043 Query 23560 GTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTG 23619 ||| || | |||| ||| || | || || | || |||| | ||| | || Sbjct 552042 GTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTT 551983 Query 23620 GAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGAT 23679 || ||| || || ||| || || || ||||| ||||| || || ||||||||||| Sbjct 551982 GAGACCAATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGAT 551923 Query 23680 GCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGG 23739 ||||| |||||||| || || | | || | ||| || || || | || || | ||| Sbjct 551922 ACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGGG 551863 Query 23740 CGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATT 23799 || | || ||| || || ||| ||| || || |||||| | ||||| || || Sbjct 551862 TGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTATTTGCTGGACATGAGGTT 551803 Query 23800 GTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCAT 23859 || || | || | || | || || || || |||| || || ||||| || Sbjct 551802 ATAGGTCTGTATAACCTTCTCCACATCATCACCCCAGATGCCGACAGCCACACGCATGAT 551743 Query 23860 CATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCAT 23919 ||||| || ||||||||||| | ||| || |||| ||||||||| || | || Sbjct 551742 CATGTGCTGCGGTCTCTCGACGATCTTATCGTCAAGCTTGAGCAGATATGATCGCTCCAA 551683 Query 23920 CGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 || || || || || || | ||||| ||||| | || | || ||||| || Sbjct 551682 AGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCTGTCATAGACAATGGCAGA 551629 >seq334 Length=652976 Score = 228 bits (252), Expect = 7e-55 Identities = 562/841 (67%), Gaps = 31/841 (4%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||| ||||| || || ||||||| || || | || || Sbjct 128368 ATCTGGCAGATGTACAAGAAGCACGAAGCTTCCTTCTGGACCGCTGAGGAGATTGATCTC 128427 Query 57630 TCTAAGGATCTGAGCGATTGGG---ATTCCCTCAAAGAATCTGA-GAGAAATTTT--ATT 57683 || |||||||| ||| ||| | ||| || || ||| ||||| || | || Sbjct 128428 TCCAAGGATCTCCACGACTGGAGCAACCGCCTAAACGA---TGATGAGAAGTTCTTCATC 128484 Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743 ||| | | || ||||||||||||||||| || ||||| |||||||| | ||||| Sbjct 128485 TCCCACATCCTTGCCTTTTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTTGTCGAG 128544 Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803 |||| || || || || | | |||||| ||||||| ||||| || || | Sbjct 128545 CGATTCTCTGGCGAGGTCCAGATTCCCGAGGCGCGATGCTTCTACGGTTTCCAGATCATG 128604 Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAAC 57863 || || ||| | || || || | || || || ||||| || || ||| | ||||| | Sbjct 128605 ATGGAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGACACATACATCAAGGAGCCC 128664 Query 57864 GACGAGAA-ACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922 | | |||| || | || |||||||| ||||| || || || ||| || |||||| Sbjct 128665 GCCCAGAAGACCCAT-CTCTTCAACGCCATCGACACCATCCCTTGCATCCGCAGGAAGGC 128723 Query 57923 AGAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAA 57978 || ||| | | | ||||| | ||| | | |||| |||||| || | | | Sbjct 128724 GGACTGGGCCCTGCACTGGATCGCTGACAAG----AAGTCCACCTTCGCCCAGCGTTTGA 128779 Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038 |||| || ||||||||||| || || ||||| || ||| || | || || ||| Sbjct 128780 TCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGC 128839 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 | ||||| || || || |||||||||||||| || |||||| | || ||||| |||| Sbjct 128840 TCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCTAACGAGCTCATCTCGCGTGACG 128899 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158 |||||||||| || || || || |||||| ||| ||| ||| |||| ||||| | | Sbjct 128900 AGGGTCTCCACACCGACTTCGCCTGCCTACTGTTCTCGCAC---CTCAA-CAACCGCCCC 128955 Query 58159 G----GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | |||| | || | | || ||||| || || ||||| ||||| | || || | Sbjct 128956 GGCAAGGATGTCGTCCAGAAGATCATCACAGATGCCGTCGCCATCGAGCAGGAATTCTTG 129015 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || || || ||| | ||||| |||||| | | ||| ||||||| Sbjct 129016 ACGGAGGCACTGCCCTGCGCCCTACTCGGCATGAACGCCAACCTCATGAAGCAGTACATC 129075 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 ||||| || |||||| | || ||| ||| || | |||| || ||| | | | Sbjct 129076 GAGTTCGTCGCCGACCGTCTATTGGTCGCCCTCGGTAACGAGAAGGT--GTACCGCGCCA 129133 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAA 58392 ||| || || || || ||| | ||||| |||| |||||||| ||||| ||||| | Sbjct 129134 CAAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 129193 Query 58393 A 58393 | Sbjct 129194 A 129194 >seq698 Length=460427 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || ||||| || |||||| | || || || | || Sbjct 203578 ATGCAAATATTCGTGAAGACTCTCACTGGCAAGACAATCACCCTTGAGGTGGAGTCTTCG 203637 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || ||||||||| || | ||||||||||| Sbjct 203638 GACACGATCGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCAA 203697 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || || || || || || || |||||||| || || ||||||| || ||| Sbjct 203698 CAACGACTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTACAAC 203757 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || ||||| || || || || || |||| | || |||| Sbjct 203758 ATTCAGAAGGAGTCGACCCTGCACCTTGTTCTCCGACTTCGCGGTGGTA 203806 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| |||| || || || || ||| |||| |||||| | ||| Sbjct 203806 ATGCAAATCTTTGTCAAGACATTGACGGGGAAGACAATTACCCTCGAAGTTGAATCTTCC 203865 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||||||| | || || || || Sbjct 203866 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAA 203925 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || |||||||| || ||| |||| ||| | ||| ||||||| || ||| Sbjct 203926 CAACGTCTCATCTTCGCTGGAAAGCAGCTGGAGGACGGTCGCACTCTGAGCGACTACAAC 203985 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || || || || |||| || Sbjct 203986 ATCCAGAAGGAGTCTACGCTCCACTTGGTTCT 204017 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 31205 GTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAA 31264 |||||||| || || || || || |||||| | || || || ||||||||| |||| Sbjct 203362 GTAAAGACCCTTACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTCCGACACCATCGAC 203421 Query 31265 ACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATA 31324 | ||||| || || ||||||||| ||| | || || ||||||||||| | || Sbjct 203422 AATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGATTGATC 203481 Query 31325 TTCGCTGGCAAACAGTTGGAAGA--CTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 ||||| ||||| ||| | || || | | |||| ||| || ||||| || || | Sbjct 203482 TTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTAT--CCGACTACAACATCCAGAAGG 203539 Query 31383 AATCGACTCTTCATCTGGTACT 31404 |||| |||||||| || || || Sbjct 203540 AATCCACTCTTCACCTCGTCCT 203561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445762248800400